Results: 28
Compact and evenly distributed k-mer binning for genomic sequences.
- Published in:
- 2021
- Publication type:
- Correction Notice
Scool: a new data storage format for single-cell Hi-C data.
- Published in:
- 2021
- Publication type:
- Correction Notice
Bacnet: a user-friendly platform for building multi-omics websites.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1335, doi. 10.1093/bioinformatics/btaa828
- Publication type:
- Article
COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1332, doi. 10.1093/bioinformatics/btaa834
- Publication type:
- Article
SEEDS: data driven inference of structural model errors and unknown inputs for dynamic systems biology.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1330, doi. 10.1093/bioinformatics/btaa786
- Publication type:
- Article
Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1327, doi. 10.1093/bioinformatics/btaa785
- Publication type:
- Article
MMAP: a cloud computing platform for mining the maximum accuracy of predicting phenotypes from genotypes.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1324, doi. 10.1093/bioinformatics/btaa824
- Publication type:
- Article
Swan: a library for the analysis and visualization of long-read transcriptomes.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1322, doi. 10.1093/bioinformatics/btaa836
- Publication type:
- Article
BP4RNAseq: a babysitter package for retrospective and newly generated RNA-seq data analyses using both alignment-based and alignment-free quantification method.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1319, doi. 10.1093/bioinformatics/btaa832
- Publication type:
- Article
MicrobiomeExplorer: an R package for the analysis and visualization of microbial communities.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1317, doi. 10.1093/bioinformatics/btaa838
- Publication type:
- Article
Bedtk: finding interval overlap with implicit interval tree.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1315, doi. 10.1093/bioinformatics/btaa827
- Publication type:
- Article
FlaGs and webFlaGs: discovering novel biology through the analysis of gene neighbourhood conservation.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1312, doi. 10.1093/bioinformatics/btaa788
- Publication type:
- Article
EpiGraphDB: a database and data mining platform for health data science.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1304, doi. 10.1093/bioinformatics/btaa961
- Publication type:
- Article
Network principal component analysis: a versatile tool for the investigation of multigroup and multiblock datasets.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1297, doi. 10.1093/bioinformatics/btaa954
- Publication type:
- Article
RepeatFS: a file system providing reproducibility through provenance and automation.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1292, doi. 10.1093/bioinformatics/btaa950
- Publication type:
- Article
MetaTX: deciphering the distribution of mRNA-related features in the presence of isoform ambiguity, with applications in epitranscriptome analysis.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1285, doi. 10.1093/bioinformatics/btaa938
- Publication type:
- Article
Detection of crossover points in detrended fluctuation analysis: an application to EEG signals of patients with epilepsy.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1278, doi. 10.1093/bioinformatics/btaa955
- Publication type:
- Article
A robust computational pipeline for model-based and data-driven phenotype clustering.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1269, doi. 10.1093/bioinformatics/btaa948
- Publication type:
- Article
Agile workflow for interactive analysis of mass cytometry data.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1263, doi. 10.1093/bioinformatics/btaa946
- Publication type:
- Article
PathExt: a general framework for path-based mining of omics-integrated biological networks.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1254, doi. 10.1093/bioinformatics/btaa941
- Publication type:
- Article
Simulating intervertebral disc cell behaviour within 3D multifactorial environments.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1246, doi. 10.1093/bioinformatics/btaa939
- Publication type:
- Article
Inferring TF activities and activity regulators from gene expression data with constraints from TF perturbation data.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1234, doi. 10.1093/bioinformatics/btaa947
- Publication type:
- Article
Bipartite tight spectral clustering (BiTSC) algorithm for identifying conserved gene co-clusters in two species.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1225, doi. 10.1093/bioinformatics/btaa741
- Publication type:
- Article
RNANet: an automatically built dual-source dataset integrating homologous sequences and RNA structures.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1218, doi. 10.1093/bioinformatics/btaa944
- Publication type:
- Article
Halcyon: an accurate basecaller exploiting an encoder–decoder model with monotonic attention.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1211, doi. 10.1093/bioinformatics/btaa953
- Publication type:
- Article
ALeS: adaptive-length spaced-seed design.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1206, doi. 10.1093/bioinformatics/btaa945
- Publication type:
- Article
Fast detection of differential chromatin domains with SCIDDO.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1198, doi. 10.1093/bioinformatics/btaa960
- Publication type:
- Article
MEScan: a powerful statistical framework for genome-scale mutual exclusivity analysis of cancer mutations.
- Published in:
- Bioinformatics, 2021, v. 37, n. 9, p. 1189, doi. 10.1093/bioinformatics/btaa957
- Publication type:
- Article