Works matching IS 14675463 AND DT 2019 AND VI 20 AND IP 2

Results: 35

Application of Atlas of Cancer Signalling Network in preclinical studies.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 701, doi. 10.1093/bib/bby031

By:

Gomez, L Cristobal Monraz;
Kondratova, Maria;
Ravel, Jean-Marie;
Barillot, Emmanuel;
Zinovyev, Andrei;
Kuperstein, Inna

Publication type:

Article

Robust genetic interaction analysis.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 624, doi. 10.1093/bib/bby033

By:

Wu, Mengyun;
Ma, Shuangge

Publication type:

Article

Disease prediction by cell-free DNA methylation.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 585, doi. 10.1093/bib/bby029

By:

Feng, Hao;
Jin, Peng;
Wu, Hao

Publication type:

Article

Post genome-wide association analysis: dissecting computational pathway/network-based approaches.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 690, doi. 10.1093/bib/bby035

By:

Chimusa, Emile R;
Dalvie, Shareefa;
Dandara, Collet;
Wonkam, Ambroise;
Mazandu, Gaston K

Publication type:

Article

Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 682, doi. 10.1093/bib/bby034

By:

Negri, Tatianne da Costa;
Alves, Wonder Alexandre Luz;
Bugatti, Pedro Henrique;
Saito, Priscila Tiemi Maeda;
Domingues, Douglas Silva;
Paschoal, Alexandre Rossi

Publication type:

Article

Integrated use of bioinformatic resources reveals that co-targeting of histone deacetylases, IKBK and SRC inhibits epithelial-mesenchymal transition in cancer.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 717, doi. 10.1093/bib/bby030

By:

Barneh, Farnaz;
Mirzaie, Mehdi;
Nickchi, Payman;
Tan, Tuan Zea;
Thiery, Jean Paul;
Piran, Mehran;
Salimi, Mona;
Goshadrou, Fatemeh;
Aref, Amir R;
Jafari, Mohieddin

Publication type:

Article

iProt-Sub: a comprehensive package for accurately mapping and predicting protease-specific substrates and cleavage sites.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 638, doi. 10.1093/bib/bby028

By:

Song, Jiangning;
Wang, Yanan;
Li, Fuyi;
Akutsu, Tatsuya;
Rawlings, Neil D;
Webb, Geoffrey I;
Chou, Kuo-Chen

Publication type:

Article

Comparison and evaluation of integrative methods for the analysis of multilevel omics data: a study based on simulated and experimental cancer data.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 671, doi. 10.1093/bib/bby027

By:

Pucher, Bettina M;
Zeleznik, Oana A;
Thallinger, Gerhard G

Publication type:

Article

Molecular subtyping of cancer: current status and moving toward clinical applications.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 572, doi. 10.1093/bib/bby026

By:

Zhao, Lan;
Lee, Victor H F;
Ng, Michael K;
Yan, Hong;
Bijlsma, Maarten F

Publication type:

Article

Navigating the disease landscape: knowledge representations for contextualizing molecular signatures.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 609, doi. 10.1093/bib/bby025

By:

Saqi, Mansoor;
Lysenko, Artem;
Guo, Yi-Ke;
Tsunoda, Tatsuhiko;
Auffray, Charles

Publication type:

Article

Community-driven roadmap for integrated disease maps.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 659, doi. 10.1093/bib/bby024

By:

Ostaszewski, Marek;
Gebel, Stephan;
Kuperstein, Inna;
Mazein, Alexander;
Zinovyev, Andrei;
Dogrusoz, Ugur;
Hasenauer, Jan;
Fleming, Ronan M T;
Novère, Nicolas Le;
Gawron, Piotr;
Ligon, Thomas;
Niarakis, Anna;
Nickerson, David;
Weindl, Daniel;
Balling, Rudi;
Barillot, Emmanuel;
Auffray, Charles;
Schneider, Reinhard

Publication type:

Article

Analysis of long noncoding RNAs highlights region-specific altered expression patterns and diagnostic roles in Alzheimer's disease.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 598, doi. 10.1093/bib/bby021

By:

Zhou, Meng;
Zhao, Hengqiang;
Wang, Xinyu;
Sun, Jie;
Su, Jianzhong

Publication type:

Article

Progress in single-access information systems for wheat and rice crop improvement.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 565, doi. 10.1093/bib/bby016

By:

Scheben, Armin;
Chan, Chon-Kit Kenneth;
Mansueto, Locedie;
Mauleon, Ramil;
Larmande, Pierre;
Alexandrov, Nickolai;
Wing, Rod A;
McNally, Kenneth L;
Quesneville, Hadi;
Edwards, David

Publication type:

Article

Recent developments of software and database in microbial genomics and functional genomics.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 732, doi. 10.1093/bib/bby013

By:

Gao, Feng

Publication type:

Article

Elucidating the editome: bioinformatics approaches for RNA editing detection.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 436, doi. 10.1093/bib/bbx129

By:

Diroma, Maria Angela;
Ciaccia, Loredana;
Pesole, Graziano;
Picardi, Ernesto

Publication type:

Article

Degrees of freedom analysis in educational research and decision-making: leveraging qualitative data to promote excellence in bioinformatics training and education.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 416, doi. 10.1093/bib/bbx106

By:

Tractenberg, Rochelle E

Publication type:

Article

Bioinformatics on a national scale: an example from Switzerland.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 361, doi. 10.1093/bib/bbx073

By:

Gerritsen, Vivienne Baillie;
Palagi, Patricia M;
Durinx, Christine

Publication type:

Article

Bioinformatics in the Netherlands: the value of a nationwide community.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 375, doi. 10.1093/bib/bbx087

By:

Gelder, Celia W G van;
Hooft, Rob W W;
Rijswijk, Merlijn N van;
van den Berg, Linda;
Kok, Ruben G;
Reinders, Marcel;
Mons, Barend;
Heringa, Jaap

Publication type:

Article

Bioinformatics in Latin America and SoIBio impact, a tale of spin-off and expansion around genomes and protein structures.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 390, doi. 10.1093/bib/bbx064

By:

Rivas, Javier De Las;
Bonavides-Martínez, Cesar;
Campos-Laborie, Francisco Jose

Publication type:

Article

Bioinformatics in Germany: toward a national-level infrastructure.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 370, doi. 10.1093/bib/bbx040

By:

Tauch, Andreas;
Al-Dilaimi, Arwa

Publication type:

Article

A benchmarking of workflows for detecting differential splicing and differential expression at isoform level in human RNA-seq studies.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 471, doi. 10.1093/bib/bbx122

By:

Merino, Gabriela A;
Conesa, Ana;
Fernández, Elmer A

Publication type:

Article

Toward completion of the Earth's proteome: an update a decade later.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 463, doi. 10.1093/bib/bbx127

By:

Mier, Pablo;
Andrade-Navarro, Miguel A

Publication type:

Article

Alignment-free inference of hierarchical and reticulate phylogenomic relationships.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 426, doi. 10.1093/bib/bbx067

By:

Bernard, Guillaume;
Chan, Cheong Xin;
Chan, Yao-ban;
Chua, Xin-Yi;
Cong, Yingnan;
Hogan, James M;
Maetschke, Stefan R;
Ragan, Mark A

Publication type:

Article

A rank-based algorithm of differential expression analysis for small cell line data with statistical control.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 482, doi. 10.1093/bib/bbx135

By:

Li, Xiangyu;
Cai, Hao;
Wang, Xianlong;
Ao, Lu;
Guo, You;
He, Jun;
Gu, Yunyan;
Qi, Lishuang;
Guan, Qingzhou;
Lin, Xu;
Guo, Zheng

Publication type:

Article

Prediction of protein–protein interactions between fungus (Magnaporthe grisea) and rice (Oryza sativa L.).

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 448, doi. 10.1093/bib/bbx132

By:

Ma, Shiwei;
Song, Qi;
Tao, Huan;
Harrison, Andrew;
Wang, Shaobo;
Liu, Wei;
Lin, Shoukai;
Zhang, Ziding;
Ai, Yufang;
He, Huaqin

Publication type:

Article

Prediction of lncRNAs and their interactions with nucleic acids: benchmarking bioinformatics tools.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 551, doi. 10.1093/bib/bby032

By:

Antonov, Ivan V;
Mazurov, Evgeny;
Borodovsky, Mark;
Medvedeva, Yulia A

Publication type:

Article

A new pan-European Train-the-Trainer programme for bioinformatics: pilot results on feasibility, utility and sustainability of learning.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 405, doi. 10.1093/bib/bbx112

By:

Via, Allegra;
Attwood, Teresa K;
Fernandes, Pedro L;
Morgan, Sarah L;
Schneider, Maria Victoria;
Palagi, Patricia M;
Rustici, Gabriella;
Tractenberg, Rochelle E

Publication type:

Article

MicroRNAs and complex diseases: from experimental results to computational models.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 515, doi. 10.1093/bib/bbx130

By:

Chen, Xing;
Xie, Di;
Zhao, Qi;
You, Zhu-Hong

Publication type:

Article

Machine learning approaches to decipher hormone and HER2 receptor status phenotypes in breast cancer.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 504, doi. 10.1093/bib/bbx138

By:

Adabor, Emmanuel S;
Acquaah-Mensah, George K

Publication type:

Article

Harmonizing semantic annotations for computational models in biology.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 540, doi. 10.1093/bib/bby087

By:

Neal, Maxwell Lewis;
König, Matthias;
Nickerson, David;
Mısırlı, Göksel;
Kalbasi, Reza;
Dräger, Andreas;
Atalag, Koray;
Chelliah, Vijayalakshmi;
Cooling, Michael T;
Cook, Daniel L;
Crook, Sharon;
Alba, Miguel de;
Friedman, Samuel H;
Garny, Alan;
Gennari, John H;
Gleeson, Padraig;
Golebiewski, Martin;
Hucka, Michael;
Juty, Nick;
Myers, Chris

Publication type:

Article

A global perspective on evolving bioinformatics and data science training needs.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 398, doi. 10.1093/bib/bbx100

By:

Attwood, Teresa K;
Blackford, Sarah;
Brazas, Michelle D;
Davies, Angela;
Schneider, Maria Victoria

Publication type:

Article

Evaluation of variable selection methods for random forests and omics data sets.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 492, doi. 10.1093/bib/bbx124

By:

Degenhardt, Frauke;
Seifert, Stephan;
Szymczak, Silke

Publication type:

Article

Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 384, doi. 10.1093/bib/bbx071

By:

Schneider, Maria Victoria;
Griffin, Philippa C;
Tyagi, Sonika;
Flannery, Madison;
Dayalan, Saravanan;
Gladman, Simon;
Watson-Haigh, Nathan;
Bayer, Philipp E;
Charleston, Michael;
Cooke, Ira;
Cook, Rob;
Edwards, Richard J;
Edwards, David;
Gorse, Dominique;
McConville, Malcolm;
Powell, David;
Wilkins, Marc R;
Lonie, Andrew

Publication type:

Article

Translational medicine in the Age of Big Data.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 457, doi. 10.1093/bib/bbx116

By:

Tatonetti, Nicholas P

Publication type:

Article

Bioinformatics: scalability, capabilities and training in the data-driven era.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 735, doi. 10.1093/bib/bbz053

By:

Schneider, Maria Victoria;
Jimenez, Rafael C.

Publication type:

Article