Works matching DE "NUCLEOTIDE sequencing"

Results: 5000

First Report of SPECC1L::ALK Fusion in Medullary Thyroid Carcinoma with Remarkable Response to Alectinib.

Published in:

Thyroid, 2025, v. 35, n. 6, p. 701, doi. 10.1089/thy.2025.0017

By:

Bischoff, Hervé;
Fattori, Antonin;
Moinard-Butot, Fabien;
Schneegans, Olivier;
Diaz, Pablo;
Reita, Damien;
Rimelen, Valérie;
Voegeli, Anne-Claire;
Bender, Laura

Publication type:

Article

Phenotypic and Genotypic Antimicrobial Resistance Profiles of Flavobacterium psychrophilum and Flavobacterium branchiophilum Isolated From Rainbow Trout (Oncorhynchus mykiss) in Slovenia.

Published in:

Journal of Fish Diseases, 2025, v. 48, n. 7, p. 1, doi. 10.1111/jfd.14119

By:

Pavlin, Katarina;
Papić, Bojan;
Zdovc, Irena;
Knific, Tanja;
Gruntar, Igor;
Sitar, Rosvita;
Žele Vengušt, Diana;
Seničar, Marija;
Ocepek, Matjaž;
Švara, Tanja

Publication type:

Article

A Preliminary Investigation of the Gastrointestinal Bacterial Microbiomes of Barred Owls (Strix varia) Admitted to a Wildlife Hospital.

Published in:

Animals (2076-2615), 2025, v. 15, n. 11, p. 1643, doi. 10.3390/ani15111643

By:

Rhim, Haerin;
Aguilar, Maria G.;
Boykin, Kimberly L.;
Zapanta, Kaylie;
Krumbeck, Janina A.;
Mitchell, Mark A.

Publication type:

Article

Validating Multicenter Cohort Circular RNA Model for Early Screening and Diagnosis of Gestational Diabetes Mellitus.

Published in:

Diabetes & Metabolism Journal, 2025, v. 49, n. 3, p. 462, doi. 10.4093/dmj.2024.0205

By:

Shuo Ma;
Yaya Chen;
Zhexi Gu;
Jiwei Wang;
Fengfeng Zhao;
Yuming Yao;
Gulinaizhaer Abudushalamu;
Shijie Cai;
Xiaobo Fan;
Miao Miao;
Xun Gao;
Chen Zhang;
Guoqiu Wu

Publication type:

Article

Comparative Analysis of Light Microscopy and High-Throughput Sequencing for Phytoplankton Detection in Rivers Flowing into the Sea.

Published in:

Water (20734441), 2025, v. 17, n. 11, p. 1559, doi. 10.3390/w17111559

By:

Hu, Xiaokun;
Liu, Yunlong;
Wang, Rui;
Dong, Zhaojun;
Lin, Kuixuan;
Lv, Shucong;
Liu, Yuchen;
Lu, Wenze;
Liu, Lusan

Publication type:

Article

Anlotinib combined with benmelstobart as a chemo-free first-line treatment in advanced esophageal squamous cell carcinoma: an exploratory multicenter, single-arm phase II clinical trial.

Published in:

Molecular Cancer, 2025, v. 24, n. 1, p. 1, doi. 10.1186/s12943-025-02376-w

By:

Meng, Xiangrui;
Yang, Xiuli;
Hong, Yonggui;
Wang, Wenkang;
Zhang, Zhiye;
Xia, Jin;
Chen, Yunfang;
Zhou, Yue;
Lu, Taiying;
Song, Min;
Shan, Zhengzheng;
Wu, Tao;
Wu, Weilong;
Shen, Ling;
Guan, Lulu;
Ma, Mingying;
Wang, Lisen;
Luo, Xi;
Xin, Dao;
Ma, Yihui

Publication type:

Article

Transcriptomic Profiling of Quinoa Reveals Distinct Defense Responses to Exogenous Methyl Jasmonate and Salicylic Acid.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1708, doi. 10.3390/plants14111708

By:

Rollano-Peñaloza, Oscar M.;
Neyrot, Sara;
Bravo Barrera, Jose A.;
Mollinedo, Patricia;
Rasmusson, Allan G.

Publication type:

Article

Rejuvenation of Mature Ilex paraguariensis Plants Through Serial Rooted Cuttings: Exploring the Roles of miRNAs in Reversing Adult Phase, Promoting Root Formation, and Determining Root Structure.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1668, doi. 10.3390/plants14111668

By:

Duarte, María J.;
Acevedo, Raúl M.;
Ortiz, Nicolás L.;
Álvarez, Mayra Y.;
Sansberro, Pedro A.

Publication type:

Article

Molecular Characterization of Tobacco Streak Virus, Beet Ringspot Virus, and Beet Ringspot Virus Satellite RNA from a New Natural Host, Phlox paniculata.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1619, doi. 10.3390/plants14111619

By:

Motsar, Elena;
Sheveleva, Anna;
Sharko, Fedor;
Petrova, Kristina;
Slobodova, Natalia;
Murataev, Ramil;
Mitrofanova, Irina;
Chirkov, Sergei

Publication type:

Article

Effects of Soil Properties and Seasonal Variations on Microbial Communities in Constructed Wetlands.

Published in:

Microbial Ecology, 2025, v. 88, n. 1, p. 1, doi. 10.1007/s00248-025-02564-7

By:

Chen, Ting-Kai;
Shiau, Yo-Jin

Publication type:

Article

Diagnostic value of bronchoalveolar lavage fluid metagenomic next-generation sequencing for pulmonary infections in patients with connective tissue disease: A retrospective study.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-02472-3

By:

Wang, Huyan;
Zhao, Baojing

Publication type:

Article

Impact of Clove Essential Oil on the Intestinal Flora in Mice Infected with Candida albicans.

Published in:

Molecules, 2025, v. 30, n. 11, p. 2372, doi. 10.3390/molecules30112372

By:

Gao, Yuan;
Guo, Yuyang;
Chen, Shurong;
Zhang, Jianmei;
Wang, Jinhe;
Wang, Fuling;
Luo, Jianghan;
Yan, Lijun

Publication type:

Article

Transcript Long‐Read Sequencing Unveils the Molecular Complexity of a Novel ROGDI Splicing Variant in a Tunisian Family With Kohlschütter‐Tönz Syndrome.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 705, doi. 10.1111/cge.14725

By:

Essid, Miriam;
Karoui, Sana;
Zribi, Mouna;
Ben Younes, Thouraya;
Januel, Louis;
Lafont, Estelle;
Labalme, Audrey;
Ben Hafsa, Meriem;
Hun Seo, Go;
Khatrouch, Safa;
Boudabous, Hela;
Ben Chehida, Amel;
Sanlaville, Damien;
Jilani, Houweyda;
Benjemaa, Lamia;
Kraoua, Ichraf;
Lesca, Gaetan;
Chatron, Nicolas

Publication type:

Article

Lethal Phenotype and Expansion of the Clinical Spectrum of Biallelic Loss of Function Variant in SENP7 Gene Unveiled by Whole Exome Sequencing.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 673, doi. 10.1111/cge.14695

By:

Saad, Ahmed K.;
Hassan, Nagwa H.;
Soliman, Hala N.;
Zaki, Maha S.;
Senousy, Sameh M.;
El‐dessouky, Sara H.

Publication type:

Article

Reanalysis of Exome Sequencing Data in the Indian Undiagnosed Diseases Program: Improving Diagnostic Yield and Ending Diagnostic Odyssey.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 620, doi. 10.1111/cge.14694

By:

Garg, Neha;
Lakshmi, Pragna;
Singh, Suzena M.;
Kulshreshta, Samarth;
Ranganath, Prajnya;
Moirangthem, Amita;
Dalal, Ashwin;
Gahlot, Aakanksha;
Puri, Ratna Dua

Publication type:

Article

Improved Diagnostic Yield in Recessive Intellectual Disability Utilizing Systematic Whole Exome Sequencing Data Reanalysis.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 612, doi. 10.1111/cge.14692

By:

Fattahi, Zohreh;
Shokouhian, Ebrahim;
Peymani, Fatemeh;
Babanejad, Mojgan;
Beheshtian, Maryam;
Edizadeh, Masoud;
Molaei, Negar;
Alagha, Parnian;
Ghodratpour, Fatemeh;
Keshavarzi, Fatemeh;
Moghadam, Masoumeh Goleyjani;
Arzhangi, Sanaz;
Kahrizi, Kimia;
Najmabadi, Hossein

Publication type:

Article

Graph-based pan-genome analysis reveals diversity of structural variations in native and commercial chicken.

Published in:

Frontiers of Agricultural Science & Engineering, 2025, v. 12, n. 2, p. 355, doi. 10.15302/J-FASE-2024591

By:

Yiming WANG;
Zijia NI;
Yinhua HUANG

Publication type:

Article

Chromophobe renal cell carcinoma with sarcomatoid change: A case report.

Published in:

Oncology Letters, 2025, v. 30, n. 1, p. N.PAG, doi. 10.3892/ol.2025.15117

By:

Ahn, Ae Ri;
Noh, Sang Jae;
Jeong, Young Bum;
Kim, Kyoung Min

Publication type:

Article

Malignant mesothelioma with a novel BAP1 germline frameshift mutation treated with dual immune checkpoint inhibitors: A case report.

Published in:

Oncology Letters, 2025, v. 30, n. 1, p. N.PAG, doi. 10.3892/ol.2025.15104

By:

Zhou, Na;
Wu, Mingying;
Wang, Chenyu;
Yuan, Mingming;
Cheng, Yuejuan;
Wu, Huanwen;
Gao, Xin;
Yu, Shuangni;
Zhao, Lin

Publication type:

Article

Primary pulmonary malignant melanoma with H3K27Me3 loss: A case report.

Published in:

2025

By:

Li, Houqiang;
Zheng, Lanqing;
Yu, Xunbin;
Chen, Linfeng;
Lv, Shanshan;
Chen, Xin

Publication type:

Case Study

Rapid Identification of Soybean SC15 Resistance Locus to Soybean Mosaic Virus by BSA-seq.

Published in:

Plant Molecular Biology Reporter, 2025, v. 43, n. 2, p. 870, doi. 10.1007/s11105-024-01517-7

By:

Tang, Xiangmin;
Jin, Gang;
Chen, Huaizhu;
Cai, Zhaoyan;
Lai, Zhenguang;
Wei, Qingyuan;
Li, Kai;
Zhi, Haijian;
Tan, Yurong;
Chen, Dongliang;
Zeng, Weiying;
Yang, Shouzhen

Publication type:

Article

Leveraging ddRADseq for Uncovering New Genome-Wide and Polymorphic SSR Markers in Japanese Plum (Prunus salicina Lindl.).

Published in:

Plant Molecular Biology Reporter, 2025, v. 43, n. 2, p. 688, doi. 10.1007/s11105-024-01499-6

By:

Acuña, C. V.;
Aguirre, N. C.;
Filippi, C. V.;
García, M. N.;
Rivas, J. G.;
Villalba, P. V.;
Gutiérrez, A. V.;
Martínez, M. C.;
Cerrillo, T.;
Valentini, G. H.;
Sánchez, G.;
Hopp, H. E.;
Marcucci Poltri, S. N.

Publication type:

Article

Analysis of endophytic bacterial diversity of Puerariae thomsonii from different production areas and their correlation with secondary metabolites.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1534308

By:

Xu, Yang;
Zeng, Lihua;
Peng, Zheng;
Chang, Nana;
Wang, Ye;
Zheng, Lingling;
Ren, Yan;
Li, Hui;
Wang, Tielin

Publication type:

Article

Glyphosate-microbial interactions: metagenomic insights and future directions.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1570235

By:

Sibalekile, Ayabonga;
Araya, Tesfay;
Castillo Hernandez, Julio;
Kotzé, Elmarie

Publication type:

Article

Comparative of metagenomic and targeted next-generation sequencing in lower respiratory tract fungal infections.

Published in:

Frontiers in Cellular & Infection Microbiology, 2025, p. 1, doi. 10.3389/fcimb.2025.1534519

By:

Chen, Zhiyang;
Liu, Xin;
Tan, Li;
Lyu, Xing;
Long, Qichen;
Wu, Weimin;
Guo, Zhe;
Liu, Zhenni;
Li, Ziyang;
Hu, Min

Publication type:

Article

The relationship between virulence and drug resistance genes in Pseudomonas aeruginosa and antibiotic resistance: a targeted next-generation sequencing approach.

Published in:

Frontiers in Cellular & Infection Microbiology, 2025, p. 1, doi. 10.3389/fcimb.2025.1563741

By:

Wei, Huanhuan;
Fu, Yuanyong;
Qin, Weijuan;
Liang, Zhengyi;
Zhou, Liyan;
Gao, Jingwei;
He, Shiyi;
Wu, Xiaoning

Publication type:

Article

Preface : Invited Issue Editor, Professor Tai-Tong Wong and the Cancer Predisposition Syndrome.

Published in:

Journal of Korean Neurosurgical Society, 2025, v. 68, n. 3, p. 249, doi. 10.3340/jkns.2025.0063

By:

Phi, Ji Hoon;
Wong, Tai-Tong;
Kim, Seung-Ki

Publication type:

Article

Editors' Pick in May 2025.

Published in:

Journal of Korean Neurosurgical Society, 2025, v. 68, n. 3, p. 247, doi. 10.3340/jkns.2025.0080

By:

Yang, Hee-Jin

Publication type:

Article

Reply to: "Comments on the paper 'Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple‐negative breast cancer' by Y. Chen et al.".

Published in:

International Journal of Cancer, 2025, v. 157, n. 3, p. 590, doi. 10.1002/ijc.35434

By:

Chen, Youdinghuan;
Salas, Lucas A.;
Marotti, Jonathan D.;
Jenkins, Nicole P.;
Cheng, Chao;
Miller, Todd W.;
Kettenbach, Arminja N.;
Christensen, Brock C.

Publication type:

Article

Monitoring the impact of chlorinated drinking water on the developing gut microbiota of adolescent mice using genetic profiling.

Published in:

International Journal of Environmental Studies, 2025, v. 82, n. 3, p. 1210, doi. 10.1080/00207233.2024.2444847

By:

Mulcrone, Patrick L.;
Narrowe, Adrienne;
Jones, Steven;
Hu, Weiming;
Bittinger, Kyle;
Moustafa, Ahmed M.;
Liu, LinShu;
Xiao, Weidong;
Firrman, Jenni

Publication type:

Article

Variant evolution graph: Can we infer how SARS-CoV-2 variants are evolving?

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0323970

By:

Das, Badhan;
Heath, Lenwood S.

Publication type:

Article

Structural Analysis and Phylogenetic Relationship of a Lepidopteran Scopelodes kwangtungensis Based on its Complete Mitochondrial Genome Sequence.

Published in:

Pakistan Journal of Zoology, 2025, v. 57, n. 3, p. 1151, doi. 10.17582/journal.pjz/20230730111147

By:

Pengfei Chu;
Jie Xing;
Fang Li;
Ting Li;
Zhenglei Qiao

Publication type:

Article

Ozone-Induced Lung Injury are Mediated Via PPAR-Mediated Ferroptosis in Mice.

Published in:

Biological Trace Element Research, 2025, v. 203, n. 6, p. 3132, doi. 10.1007/s12011-024-04386-z

By:

Li, Juan;
Wei, Huai;
Wang, Ning;
Chen, Jing;
Zhang, Ying;
An, Zhen;
Song, Jie;
Niu, Tianqi;
Wu, Weidong

Publication type:

Article

Unlocking the genetic blueprint of duchenne muscular dystrophy: A personalized approach with MLPA and WES.

Published in:

Global Medical Genetics, 2025, v. 12, n. 2, p. 1, doi. 10.1016/j.gmg.2025.100038

By:

Mathur, Priyanshu;
Kaur, Ashmeet;
Agarwal, Kamlesh Kumar;
Agarwal, Lokesh Kumar;
Mathur, Avisha;
Choudhary, Deepti

Publication type:

Article

Acute myeloneuropathy due to Glutaric aciduria-1: Expanding the phenotypic spectrum.

Published in:

Global Medical Genetics, 2025, v. 12, n. 2, p. 1, doi. 10.1016/j.gmg.2025.100036

By:

Baskar, Dipti;
Christopher, Rita;
Arunachal, Gautham;
Srinivas Anudeep, Davuluri Durga;
Mounika, Ambati;
Sangeeth, T. A .;
Polavarapu, Kiran;
Shalini, BS;
Joshi, Tarachand;
Sanka, Sai Bhargava;
Nashi, Saraswati;
Raja, Pritam;
Chowdary, Ravindranadh Mundlamuri;
Yadav, Ravi;
Nalini, Atchayaram;
Vengalil, Seena

Publication type:

Article

Limb-Girdle Muscular Dystrophies (LGMD): Clinical features, diagnosis and genetic variability through next generation sequencing.

Published in:

Global Medical Genetics, 2025, v. 12, n. 1, p. 1, doi. 10.1016/j.gmg.2024.100035

By:

Mathur, Priyanshu;
Kaur, Ashmeet;
Vijay, Urvashi;
Gupta, Ashok;
Agarwal, Kamlesh;
Agrawal, Lokesh

Publication type:

Article

Deep sequencing of yeast and mouse tRNAs and tRNA fragments using OTTR.

Published in:

eLife, 2025, p. 1, doi. 10.7554/eLife.77616

By:

Gustafsson, Hans Tobias;
Ferguson, Lucas;
Galan, Carolina;
Tianxiong Yu;
Upton, Heather;
Kaymak, Ebru;
Zhiping Weng;
Collins, Kathleen;
Rando, Oliver J.

Publication type:

Article

Resource availability for CNS tumor diagnostics in the Asian Oceanian region: A survey by the Asian Oceanian Society of Neuropathology committee for Adapting Diagnostic Approaches for Practical Taxonomy in Resource‐Restrained Regions (AOSNP‐ADAPTR)

Published in:

Brain Pathology, 2025, v. 35, n. 4, p. 1, doi. 10.1111/bpa.13329

By:

Sarkar, Chitra;
Rao, Shilpa;
Santosh, Vani;
Al‐Hussaini, Maysa;
Park, Sung Hye;
Tihan, Tarik;
Buckland, Michael E.;
Ng, Ho‐Keung;
Komori, Takashi

Publication type:

Article

Impact of long-term cultivation with crude oil on wetland microbial community shifts and the hydrocarbon degradation potential.

Published in:

Energy Sources Part A: Recovery, Utilization & Environmental Effects, 2025, v. 47, n. 1, p. 5441, doi. 10.1080/15567036.2021.1896609

By:

Liu, Haijun;
Yang, Guo;
Jia, Hui;
Yao, Jun

Publication type:

Article

Analysis of the Relationship Between Cervical Cancer Progression and the Microbiome.

Published in:

International Journal of General Medicine, 2025, v. 18, p. 2449, doi. 10.2147/IJGM.S520936

By:

Gao, Yue-Yue;
Li, Xiao-Xue;
Zuo, Hui;
Zhang, Ping

Publication type:

Article

Diagnostic Performance of Clinical Metagenomic Next-Generation Sequencing for Suspected Central Nervous System Infections in a Municipal Hospital: A Retrospective Study in China.

Published in:

Infection & Drug Resistance, 2025, v. 18, p. 2637, doi. 10.2147/IDR.S500279

By:

Wang, Huimin;
Zhao, Jianting;
Wang, Xueyao;
Li, Miaomiao;
Hu, Tiantian;
Xu, Huan;
Dong, Min;
He, Wenlong;
Che, Zhenyong

Publication type:

Article

Diagnosis of Mycoplasma Hominis Peritonitis in a CAPD Patient with Metagenomic Next-Generation Sequencing: A Case Report.

Published in:

Infection & Drug Resistance, 2025, v. 18, p. 2469, doi. 10.2147/IDR.S510660

By:

Deng, Chunfeng;
Hong, Lei;
Sun, Dongni;
Miao, Hui;
Tang, Fei;
Li, Zhaohui;
Liu, Xi

Publication type:

Article

Comprehensive Analysis of Pathogen Diversity and Diagnostic Biomarkers in Patients with Suspected Pulmonary Tuberculosis Through Metagenomic Next-Generation Sequencing.

Published in:

Infection & Drug Resistance, 2025, v. 18, p. 2215, doi. 10.2147/IDR.S504587

By:

Li, Yuecui;
Li, Chenghang;
Fang, Yu;
Zhang, LiLi;
Ying, Xiaoyan;
Ren, Ruotong;
Zang, Yinghui;
Ying, Dandan;
Zhu, Shengwei;
Liu, Jiao;
Cao, Xuefang

Publication type:

Article

Application of Metagenomic Next-Generation Sequencing in HIV-Infected Patients with Bloodstream Infections.

Published in:

Infection & Drug Resistance, 2025, v. 18, p. 2389, doi. 10.2147/IDR.S509665

By:

Liu, Huiting;
Xu, Tianzhen;
Fu, Hongxin;
Dai, Bohao;
Xie, Yirui

Publication type:

Article

Application of Metagenomic and Targeted Next-Generation Sequencing in Diagnosis of Pulmonary Tuberculosis in Bronchoalveolar Lavage Fluid.

Published in:

Infection & Drug Resistance, 2025, v. 18, p. 2229, doi. 10.2147/IDR.S514090

By:

Yang, Zhen;
Liu, Qian;
Hu, Yi;
Geng, Shuang;
Ni, Ji-Xiang

Publication type:

Article

An Atypical Pneumonia Case of Quinolone-Refractory Chlamydia Pneumoniae Successfully Treated With Omadacycline.

Published in:

2025

By:

Tong, Jiahuan;
Zhou, Linshui;
Chen, Yan;
Xu, Liqun;
Wang, Jianfeng

Publication type:

Case Study

Sparse Bayesian Group Factor Model for Feature Interactions in Multiple Count Tables Data.

Published in:

Journal of the American Statistical Association, 2025, v. 120, n. 550, p. 723, doi. 10.1080/01621459.2025.2449721

By:

Zhang, Shuangjie;
Shen, Yuning;
Chen, Irene A.;
Lee, Juhee

Publication type:

Article

Two cases of Talaromyces marneffei tracheobronchial infection in HIV-negative patients.

Published in:

BMC Infectious Diseases, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12879-025-11143-7

By:

Lu, Xingbing;
Chen, Juan;
Miao, Shiqi;
Xie, Yi

Publication type:

Article

短柄白黄侧耳CCMSSC 04611基因组特异性分析.

Published in:

Biotechnology Bulletin, 2025, v. 41, n. 5, p. 320, doi. 10.13560/j.cnki.biotech.bull.1985.2024-1137

By:

吴泽银;
黄晨阳;
赵梦然;
张利姣;
姚方杰

Publication type:

Article

A New Variant in the GATA6 Gene Associated with Tracheoesophageal Fistula, Pulmonary Vein Stenosis, and Neonatal Diabetes.

Published in:

Hormone Research in Paediatrics, 2025, v. 98, n. 3, p. 282, doi. 10.1159/000536621

By:

Pugnaloni, Flaminia;
Martini, Ludovica;
De Rose, Domenico Umberto;
Landolfo, Francesca;
Giliberti, Paola;
Ruta, Rosario;
Novelli, Antonio;
Rapini, Novella;
Barbetti, Fabrizio;
Toscano, Alessandra;
Conforti, Andrea;
Bagolan, Pietro;
Capolupo, Irma;
Dotta, Andrea

Publication type:

Article