Works matching DE "DNA-ligand interactions"

Results: 188

Structural basis for engagement by complement factor H of C3b on a self surface.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 4, p. 463, doi. 10.1038/nsmb.2018

By:

Morgan, Hugh P.;
Schmidt, Christoph Q.;
Guariento, Mara;
Blaum, Bärbel S.;
Gillespie, Dominic;
Herbert, Andrew P.;
Kavanagh, David;
Mertens, Haydyn D. T.;
Svergun, Dmitri I.;
Johansson, Conny M.;
Uhrín, Dušan;
Barlow, Paul N.;
Hannan, Jonathan P.

Publication type:

Article

Molecular recognition of histone H3 by the WD40 protein WDR5.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 8, p. 698, doi. 10.1038/nsmb1116

By:

Couture, Jean-François;
Collazo, Evys;
Trievel, Raymond C.

Publication type:

Article

Learning to unwind.

Published in:

Nature Structural & Molecular Biology, 2005, v. 12, n. 9, p. 734, doi. 10.1038/nsmb0905-734

By:

Chong, James P.J.

Publication type:

Article

Free energy calculations offer insights into the influence of receptor flexibility on ligand-receptor binding affinities.

Published in:

Journal of Computer-Aided Molecular Design, 2011, v. 25, n. 8, p. 709, doi. 10.1007/s10822-011-9453-x

By:

Dolenc, Jožica;
Riniker, Sereina;
Gaspari, Roberto;
Daura, Xavier;
van Gunsteren, Wilfred F.

Publication type:

Article

Molecular motions in drug design: the coming age of the metadynamics method.

Published in:

Journal of Computer-Aided Molecular Design, 2011, v. 25, n. 5, p. 395, doi. 10.1007/s10822-011-9415-3

By:

Biarnés, Xevi;
Bongarzone, Salvatore;
Vargiu, Attilio;
Carloni, Paolo;
Ruggerone, Paolo

Publication type:

Article

QSAR analyses on avian influenza virus neuraminidase inhibitors using CoMFA, CoMSIA, and HQSAR.

Published in:

Journal of Computer-Aided Molecular Design, 2006, v. 20, n. 9, p. 549, doi. 10.1007/s10822-006-9080-0

By:

Zheng, Mingyue;
Yu, Kunqian;
Liu, Hong;
Luo, Xiaomin;
Chen, Kaixian;
Zhu, Weiliang;
Jiang, Hualiang

Publication type:

Article

Ligand binding to domain-3 of human serum albumin: a chemometric analysis.

Published in:

Journal of Computer-Aided Molecular Design, 2003, v. 17, n. 2-4, p. 93, doi. 10.1023/A:1025305520585

By:

Hajduk, Philip J.;
Mendoza, Renaldo;
Petros, Andrew M.;
Huth, Jeffrey R.;
Bures, Mark;
Fesik, Stephen W.;
Martin, Yvonne C.

Publication type:

Article

DNA-protector and cytotoxic activity of secoisolariciresinol diglucoside derivatives.

Published in:

Chemistry of Natural Compounds, 2010, v. 46, n. 5, p. 704, doi. 10.1007/s10600-010-9720-4

By:

Stasevich, O.;
Shman, T.;
Mikhalenok, S.;
Kurchenko, V.

Publication type:

Article

Photoinduced [2+2] and [4+4] Cycloaddition and Cycloreversion Reactions for the Development of Photocontrollable DNA Binders.

Published in:

ChemPhotoChem, 2024, v. 8, n. 7, p. 1, doi. 10.1002/cptc.202300318

By:

Dohmen, Christoph;
Ihmels, Heiko

Publication type:

Article

Synthesis, spectroscopic, theoretical study, and biological activities of vanadium(IV) and vanadium(V) complexes with isonipecotic acid.

Published in:

Russian Journal of General Chemistry, 2017, v. 87, n. 3, p. 530, doi. 10.1134/S1070363217030240

By:

Jabeen, M.;
Ali, S.;
Shahzadi, S.;
Shahid, M.;
Sharma, S.;
Qanungo, K.

Publication type:

Article

Synthesis, characterization, preliminary biological screening, and interaction studies of the bis(pyridinium)amine compound, 4,4'-[(2-aminophenyl)azanediyl]bis(1-methylpyridin-1-ium)triflate with biological macromolecules.

Published in:

Russian Journal of General Chemistry, 2017, v. 87, n. 3, p. 554, doi. 10.1134/S1070363217030288

By:

Zafar, M.;
Nazar, M.;
Raza, M.;
Mughal, E.;
Dalebrook, A.;
Wright, L.

Publication type:

Article

The role of carboxymethyl substituents in the interaction of tetracationic porphyrins with DNA.

Published in:

European Biophysics Journal, 2012, v. 41, n. 9, p. 723, doi. 10.1007/s00249-012-0848-y

By:

Kovaleva, Oxana;
Tsvetkov, Vladimir;
Shchyolkina, Anna;
Borisova, Olga;
Ol'shevskaya, Valentina;
Makarenkov, Anton;
Semeikin, Alexander;
Shtil, Alexander;
Kaluzhny, Dmitry

Publication type:

Article

Netropsin binding in five duplex-dimer DNA constructs as a function of size and distance between binding sites: circular dichroism and absorption spectroscopy.

Published in:

European Biophysics Journal, 2010, v. 39, n. 5, p. 781, doi. 10.1007/s00249-009-0550-x

By:

Premvardhan, Lavanya;
Maurizot, Jean-Claude

Publication type:

Article

DNA-responsive uniform latex particles based on p-chloromethylstyrene.

Published in:

Journal of Biomaterials Science -- Polymer Edition, 2001, v. 12, n. 3, p. 283, doi. 10.1163/156856201750180816

By:

Elmas, B.;
Camli, S. T.;
Tuncel, M.;
Senel, S.;
Tuncel, A.

Publication type:

Article

Design, synthesis, molecular modeling and DNA-binding studies of new barbituric acid derivatives.

Published in:

Journal of the Iranian Chemical Society, 2022, v. 19, n. 9, p. 3887, doi. 10.1007/s13738-022-02576-x

By:

Ebadi, Ahmad;
Najafi, Zahra;
Pakdel-yeganeh, Hamed;
Dastan, Dara;
Chehardoli, Gholamabbas

Publication type:

Article

Crystal structure, DFT study, antimicrobial properties and DNA cleavage potential and thermal behavior of some new mercury complexes.

Published in:

Journal of the Iranian Chemical Society, 2017, v. 14, n. 2, p. 297, doi. 10.1007/s13738-016-0978-8

By:

Montazerozohori, M.;
Mohammadi, H.;
Masoudiasl, A.;
Nasr-Esfahani, M.;
Naghiha, R.;
Assoud, A.

Publication type:

Article

Synthesis, spectral properties, DNA binding interactions and DNA cleavage studies of lanthanide (III) complexes of 2-acetylpyridine acetoylhydrazone: the X-ray crystal structure of 10-coordinate Ce (III) and Sm (III) complexes.

Published in:

Journal of the Iranian Chemical Society, 2015, v. 12, n. 8, p. 1473, doi. 10.1007/s13738-015-0624-x

By:

Raja, Karreddula;
Suseelamma, Akkili;
Reddy, Katreddi

Publication type:

Article

Synthesis, spectroscopic, powder X-ray diffraction and DNA binding studies on copper(II) complexes of 4,4′-diaminodiphenyl sulfone.

Published in:

Journal of the Iranian Chemical Society, 2012, v. 9, n. 4, p. 441, doi. 10.1007/s13738-011-0054-3

By:

Jaideva Singh, L.;
Hemakumar Singh, R.;
Chitra, R.

Publication type:

Article

Synthesis, characterization, DNA binding and antimicrobial studies on bis(1-amidino- O-2-alkoxyethylurea) copper(II) chloride complexes (alkoxy = methoxy or ethoxy).

Published in:

Journal of the Iranian Chemical Society, 2012, v. 9, n. 4, p. 455, doi. 10.1007/s13738-011-0056-1

By:

Pramodini Devi, S.;
Bindiya Devi, R.;
Reena Devi, L.;
Damayanti, M.;
Rajen Singh, N.;
Hemakumar Singh, R.

Publication type:

Article

Differential in Vitro Biological Action, Coregulator Interactions, and Molecular Dynamic Analysis of Bisphenol A (BPA), BPAF, and BPS Ligand-ERα Complexes.

Published in:

Environmental Health Perspectives, 2018, v. 126, n. 1, p. 1, doi. 10.1289/EHP2505

By:

Yin Li;
Perera, Lalith;
Coons, Laurel A.;
Burns, Katherine A.;
Ramsey, J. Tyler;
Pelch, Katherine E.;
Houtman, René;
van Beuningen, Rinie;
Teng, Christina T.;
Korach, Kenneth S.

Publication type:

Article

Architecture of nonspecific protein?DNA interactions in the Sso7d?DNA complex.

Published in:

Nature Structural Biology, 1998, v. 5, n. 7, p. 579, doi. 10.1038/836

By:

Agback, Peter;
Baumann, Herbert;
Knapp, Stefan;
Ladenstein, Rudolf;
Härd, Torleif

Publication type:

Article

Mechanism of DNA Intercalation by Chloroquine Provides Insights into Toxicity.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 3, p. 1410, doi. 10.3390/ijms25031410

By:

Joshi, Joha;
McCauley, Micah J.;
Morse, Michael;
Muccio, Michael R.;
Kanlong, Joseph G.;
Rocha, Márcio S.;
Rouzina, Ioulia;
Musier-Forsyth, Karin;
Williams, Mark C.

Publication type:

Article

Evaluating Molecular Docking Software for Small Molecule Binding to G-Quadruplex DNA.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 19, p. 10801, doi. 10.3390/ijms221910801

By:

Dickerhoff, Jonathan;
Warnecke, Kassandra R.;
Wang, Kaibo;
Deng, Nanjie;
Yang, Danzhou

Publication type:

Article

Design, Synthesis and DNA Interaction Study of New Potential DNA Bis-Intercalators Based on Glucuronic Acid.

Published in:

International Journal of Molecular Sciences, 2013, v. 14, n. 8, p. 16851, doi. 10.3390/ijms140816851

By:

Jiuyang Zhao;
Wei Li;
Rui Ma;
Shaopeng Chen;
Sumei Ren;
Tao Jiang

Publication type:

Article

Exploring biological interaction networks with tailored weighted quasi-bicliques.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S16

By:

Wen-Chieh Chang;
Vakati, Sudheer;
Krause, Roland;
Eulenstein, Oliver

Publication type:

Article

COMMD1 disrupts HIF-1alpha/beta dimerization and inhibits human tumor cell invasion.

Published in:

2010

By:

van de Sluis, Bart;
Xicheng Mao;
Yali Zhai;
Groot, Arjan J.;
Vermeulen, Jeroen F.;
van der Wall, Elsken;
van Diest, Paul J.;
Hofker, Marten H.;
Wijmenga, Cisca;
Klomp, Leo W.;
Cho, Kathleen R.;
Fearon, Eric R.;
Vooijs, Marc;
Burstein, Ezra;
Mao, Xicheng;
Zhai, Yali

Publication type:

journal article

Cellulose-bound Peptide Arrays: Preparation and Applications.

Published in:

Biotechnology & Genetic Engineering Reviews, 2007, v. 24, p. 31, doi. 10.1080/02648725.2007.10648093

By:

Hilpert, Kai;
Winkler, Dirk F. H.;
Hancock, Robert E. W.

Publication type:

Article

Spectral Study of Interactions of 4,8,4′-Trimethylpsoralen and 4,4′-Dimethylangelicin Dyes with DNA.

Published in:

Biochemistry (00062979), 2005, v. 70, n. 7, p. 822, doi. 10.1007/s10541-005-0190-4

By:

Sibirtsev, V. S.;
Tolmachev, A. Yu.;
Kovaleva, M. V.;
Garabadzhiu, A. V.;
Traven, V. F.

Publication type:

Article

Analysis of Protein-DNA Interactions.

Published in:: Journal of Animal Science, 1996, v. 74, p. 48, doi. 10.2527/1996.74suppl_248x
Publication type:: Article

Controle da diversidade da população em algoritmos genéticos aplicados na predição de estruturas de prote-ínas.

Published in:

Scientia, 2009, v. 20, n. 2, p. 83, doi. 10.4013/sct.2009.20.2.02

By:

Tragante do Ó, Vinicius;
Tinós, Renato

Publication type:

Article

Exo-Taq-Based Detection of DNA-Binding Protein for Homogeneous and Microarray Format.

Published in:

Journal of Biochemistry, 2005, v. 138, n. 4, p. 473, doi. 10.1093/jb/mvi137

By:

Fukumori, Takashi;
Miyachi, Hirotaka;
Yokoyama, Kenji

Publication type:

Article

FLEXIBILITY AND CONTROL OF PROTEIN–DNA LOOPS.

Published in:

Biophysical Reviews & Letters, 2006, v. 1, n. 4, p. 327, doi. 10.1142/S1793048006000276

By:

KAHN, JASON D.;
CHEONG, RAYMOND;
MEHTA, RUCHI A.;
EDELMAN, LAURENCE M.;
MORGAN, MICHAEL A.

Publication type:

Article

Interaction of Glycyrrhizin and Glycyrrhetinic Acid with DNA.

Published in:

DNA & Cell Biology, 2012, v. 31, n. 1, p. 114, doi. 10.1089/dna.2011.1287

By:

Nafisi, Shohreh;
Bonsaii, Mahyar;
Manouchehri, Firouzeh;
Abdi, Khosrou

Publication type:

Article

DNA Interaction Studies of Cobalt (II) Mixed-Ligand Complexes Containing Dimethyl-1, 10-Phenanthroline and Dipyrido[3,2-a:2′,3′-c]Phenazine: The Role of Methyl Substitutions on the Mode of Binding.

Published in:

DNA & Cell Biology, 2011, v. 30, n. 7, p. 507, doi. 10.1089/dna.2010.1151

By:

Shahabadi, Nahid;
Kashanian, Soheila;
Mahdavi, Maryam

Publication type:

Article

DNA Interaction Studies of an Anticancer Plant Alkaloid, Vincristine, Using Fourier Transform Infrared Spectroscopy.

Published in:

DNA & Cell Biology, 2010, v. 29, n. 11, p. 693, doi. 10.1089/dna.2010.1035

By:

Tyagi, Gunjan;
Jangir, Deepak K.;
Singh, Parul;
Mehrotra, Ranjana

Publication type:

Article

Behavior of Ethidium Bromide-Hoechst 33258-DNA and Ethidium Bromide-Methylene Blue-DNA Triple Systems by means of UV Melting.

Published in:

Spectroscopy: An International Journal, 2015, p. 1, doi. 10.1155/2015/586231

By:

Vardevanyan, Poghos O.;
Antonyan, Ara P.;
Parsadanyan, Marine A.;
Shahinyan, Mariam A.;
Melkonyan, Gayane A.

Publication type:

Article

Ultrasensitive detection of genomic DNA from apple leaf tissues, using surface-enhanced Raman scattering.

Published in:

Spectroscopy: An International Journal, 2011, v. 25, n. 1, p. 33, doi. 10.1155/2011/628417

By:

Muntean, Cristina M.;
Leopold, Nicolae;
Halmagyi, Adela;
Valimareanu, Sergiu

Publication type:

Article

Structural characterization and DNA-binding properties of Sm(III) complex with ofloxacin using spectroscopic methods.

Published in:

Spectroscopy: An International Journal, 2009, v. 23, n. 2, p. 103, doi. 10.1155/2009/769146

By:

Changyun Chen;
Kai Chen;
Qi Long;
Meihua Ma;
Fei Ding

Publication type:

Article

Discrimination of the binding mode of DNA ligands by single-photon timing.

Published in:

Spectroscopy: An International Journal, 2009, v. 23, n. 1, p. 11, doi. 10.1155/2009/605756

By:

Nardo, Luca;
Bondani, Maria;
Andreoni, Alessandra

Publication type:

Article

Thermal, spectral, and thermodynamic studies for evaluation of calf thymus DNA interaction activity of some copper(II) complexes.

Published in:

Journal of Thermal Analysis & Calorimetry, 2012, v. 107, n. 1, p. 55, doi. 10.1007/s10973-011-1554-1

By:

Patel, Mohan;
Bhatt, Bhupesh;
Dosi, Promise

Publication type:

Article

Modulation of enhancer-promoter interactions by insulators in the Drosophila embryo.

Published in:

Nature, 1995, v. 376, n. 6540, p. 533, doi. 10.1038/376533a0

By:

Cai, Haini;
Levine, Michael

Publication type:

Article

MHC class II function preserved by low-affinity peptide interactions preceding stable binding.

Published in:

Nature, 1994, v. 370, n. 6491, p. 647, doi. 10.1038/370647a0

By:

Sadegh-Nasseri, Scheherazade;
Stern, Lawrence J.

Publication type:

Article

DNA recognition by beta-sheets in the Arc repressor-operator crystal structure.

Published in:

Nature, 1994, v. 367, n. 6465, p. 754, doi. 10.1038/367754a0

By:

Raumann, Brigitte E.;
Rould, Mark A.

Publication type:

Article

Evaluation of Ah Genotype on PAH:DNA Binding and Metabolite Excretion in Mice Fed Coal Tar.

Published in:

Polycyclic Aromatic Compounds, 2002, v. 22, n. 3/4, p. 899, doi. 10.1080/10406630213596

By:

Nemeth, Kimberly Rozett;
Weyand, Eric H.

Publication type:

Article

Dual DNA binding mode of a turn-on red fluorescent probe thiazole coumarin.

Published in:

PLoS ONE, 2020, v. 15, n. 9, p. 1, doi. 10.1371/journal.pone.0239145

By:

Ganguly, Sudakshina;
Ghosh, Debasis;
Narayanaswamy, Nagarjun;
Govindaraju, T.;
Basu, Gautam

Publication type:

Article

Synthesis Characterization and DNA Interaction Studies of a New Zn(II) Complex Containing Different Dinitrogen Aromatic Ligands.

Published in:

Bioinorganic Chemistry & Applications, 2012, p. 1, doi. 10.1155/2012/571913

By:

Shahabadi, Nahid;
Mohammadi, Somaye

Publication type:

Article

Synthesis, Crystal Structure, and Spectra Properties of the Cadmium (II) Complex with Bis(N-allylbenzimidazol-2-ylmethyl)benzylamine.

Published in:

Bioinorganic Chemistry & Applications, 2011, v. 2011, p. 1, doi. 10.1155/2011/705989

By:

Huilu Wu;
Jingkun Yuan;
Ying Bai;
Fan Kou;
Fei Jia;
Bin Liu

Publication type:

Article

Identification of Binding Mode of a Platinum(II) Complex, PtCl<sub>2</sub>(DIP), and Calf Thymus DNA.

Published in:

Bioinorganic Chemistry & Applications, 2011, v. 2011, p. 1, doi. 10.1155/2011/687571

By:

Shahabadi, Nahid;
Kashanian, Soheila;
Fatahi, Azadeh

Publication type:

Article

DNA Interaction and DNA Cleavage Studies of a New Platinum(II) Complex Containing Aliphatic and Aromatic Dinitrogen Ligands.

Published in:

Bioinorganic Chemistry & Applications, 2011, v. 2011, p. 1, doi. 10.1155/2011/525794

By:

Shahabadi, Nahid;
Kashanian, Soheila;
Mahdavi, Maryam;
Sourinejad, Noorkaram

Publication type:

Article

DNA Interaction Studies of a New Platinum(II) Complex Containing Different Aromatic Dinitrogen Ligands.

Published in:

Bioinorganic Chemistry & Applications, 2011, v. 2011, p. 1, doi. 10.1155/2011/429241

By:

Shahabadi, Nahid;
Mohammadi, Somaye;
Alizadeh, Robabeh

Publication type:

Article