Works matching DE "CYTIDINE deaminase"

Results: 405

Function analysis of the cytidine deaminases in root-knot nematode, Meloidogyne incognita.

Published in:

European Journal of Plant Pathology, 2025, v. 172, n. 1, p. 43, doi. 10.1007/s10658-024-02983-1

By:

Wang, Dongwei;
Wang, Jian;
Li, Yingmei;
Zhang, Zhuo;
Cheng, Jue;
Zhu, Chunhui;
Zhao, Zhixiang;
Tan, Xinqiu;
Zhang, Deyong;
Liu, Yong;
Cheng, Feixue

Publication type:

Article

The optimal pH of AID is skewed from that of its catalytic pocket by DNA-binding residues and surface charge.

Published in:

Biochemical Journal, 2022, v. 479, n. 1, p. 39, doi. 10.1042/BCJ20210529

By:

Ghorbani, Atefeh;
King, Justin J.;
Larijani, Mani

Publication type:

Article

Activation-Induced Cytidine Deaminase Expression in Patients with Chronic Myeloid Leukemia.

Published in:

Experimed, 2022, v. 12, n. 3, p. 155, doi. 10.26650/experimed.1193401

By:

Oguz, Emin;
Aday, Aynur Daglar;
Yavuz, Akif Selim

Publication type:

Article

Simultaneous Maturation of Single Chain Antibody Stability and Affinity by CHO Cell Display.

Published in:

Bioengineering (Basel), 2022, v. 9, n. 8, p. N.PAG, doi. 10.3390/bioengineering9080360

By:

Luo, Ruiqi;
Qu, Baole;
An, Lili;
Zhao, Yun;
Cao, Yang;
Ren, Peng;
Hang, Haiying

Publication type:

Article

Cytidine deaminase 2 is required for VLRB antibody gene assembly in lampreys.

Published in:

Science Immunology, 2020, v. 5, n. 45, p. 1, doi. 10.1126/sciimmunol.aba0925

By:

Morimoto, Ryo;
O'Meara, Connor P.;
Holland, Stephen J.;
Trancoso, Inês;
Souissi, Ahmed;
Schorpp, Michael;
Vassaux, Danièle;
Iwanami, Norimasa;
Giorgetti, Orlando B.;
Evanno, Guillaume;
Boehm, Thomas

Publication type:

Article

Targeting mutagenesis in B cells: Phosphorylation goes beyond AID association.

Published in:

Molecular & Cellular Oncology, 2018, v. 5, n. 5, p. 1, doi. 10.1080/23723556.2018.1432259

By:

Mu, Yunxiang;
McBride, Kevin M.

Publication type:

Article

Severe acute toxicity following gemcitabine administration: A report of four cases with cytidine deaminase polymorphisms evaluation.

Published in:

Oncology Letters, 2018, v. 15, n. 2, p. 1912, doi. 10.3892/ol.2017.7473

By:

Hryciuk, Beata;
Szymanowski, Bartosz;
Romanowska, Anna;
Salt, Ewa;
Wasąg, Bartosz;
Grala, Bartłomiej;
Jassem, Jacek;
Duchnowska, Renata

Publication type:

Article

Frequent aberrant p53 and Fhit expression in endoscopically resected superficial hypopharyngeal cancer and esophageal cancer.

Published in:

Oncology Letters, 2017, v. 14, n. 1, p. 587, doi. 10.3892/ol.2017.6271

By:

SOHEI YAMAMOTO;
KAZUO YASHIMA;
SOICHIRO KAWATA;
KOHEI HOSODA;
AKIHIRO TAMOTO;
YUICHIRO IKEBUCHI;
KAZUYA MATSUMOTO;
KOICHIRO KAWAGUCHI;
KENICHI HARADA;
YOSHIKAZU MURAWAKI;
HAJIME ISOMOTO

Publication type:

Article

Aberrant expression of AID and AID activators of NF-κB and PAX5 is irrelevant to EBV-associated gastric cancers, but is associated with carcinogenesis in certain EBV-non-associated gastric cancers.

Published in:

Oncology Letters, 2017, v. 13, n. 6, p. 4133, doi. 10.3892/ol.2017.5978

By:

TAKASHI MOHRI;
KEIKO NAGATA;
SATOSHI KUWAMOTO;
MICHIKO MATSUSHITA;
HIROTSUGU SUGIHARA;
MASAKO KATO;
YASUSHI HORIE;
ICHIRO MURAKAMI;
KAZUHIKO HAYASHI

Publication type:

Article

AID, p53 and MLH1 expression in early gastric neoplasms and the correlation with the background mucosa.

Published in:

Oncology Letters, 2015, v. 10, n. 2, p. 737, doi. 10.3892/ol.2015.3342

By:

SOICHIRO KAWATA;
KAZUO YASHIMA;
SOHEI YAMAMOTO;
SHUJI SASAKI;
YOHEI TAKEDA;
AKIHIRO HAYASHI;
KAZUYA MATSUMOTO;
KOICHIRO KAWAGUCHI;
KENICHI HARADA;
YOSHIKAZU MURAWAKI

Publication type:

Article

Generation of Transfer-DNA-Free Base-Edited Citrus Plants.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.835282

By:

Alquézar, Berta;
Bennici, Stefania;
Carmona, Lourdes;
Gentile, Alessandra;
Peña, Leandro

Publication type:

Article

Repertoire Sequencing of B Cells Elucidates the Role of UNG and Mismatch Repair Proteins in Somatic Hypermutation in Humans.

Published in:

Frontiers in Immunology, 2019, p. 1, doi. 10.3389/fimmu.2019.01913

By:

IJspeert, Hanna;
van Schouwenburg, Pauline A.;
Pico-Knijnenburg, Ingrid;
Loeffen, Jan;
Brugieres, Laurence;
Driessen, Gertjan J.;
Blattmann, Claudia;
Suerink, Manon;
Januszkiewicz-Lewandowska, Danuta;
Azizi, Amedeo A.;
Seidel, Marcus G.;
Jacobs, Heinz;
van der Burg, Mirjam

Publication type:

Article

Mutating for Good: DNA Damage Responses During Somatic Hypermutation.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00438

By:

Pilzecker, Bas;
Jacobs, Heinz

Publication type:

Article

Enhanced expression of activation-induced cytidine deaminase in human gastric mucosa infected by Helicobacter pylori and its decrease following eradication.

Published in:

Journal of Gastroenterology, 2014, v. 49, n. 3, p. 427, doi. 10.1007/s00535-013-0808-z

By:

Nagata, Naoyoshi;
Akiyama, Junichi;
Marusawa, Hiroyuki;
Shimbo, Takuro;
Liu, Yi;
Igari, Toru;
Nakashima, Ryo;
Watanabe, Hidenobu;
Uemura, Naomi;
Chiba, Tsutomu

Publication type:

Article

Macrophages mediate gemcitabine resistance of pancreatic adenocarcinoma by upregulating cytidine deaminase.

Published in:

Oncogene, 2014, v. 33, n. 29, p. 3812, doi. 10.1038/onc.2013.357

By:

Weizman, N;
Krelin, Y;
Shabtay-Orbach, A;
Amit, M;
Binenbaum, Y;
Wong, R J;
Gil, Z

Publication type:

Article

Adaptive Genetic Changes by Design: A Look at the DNA Editing by Activation-induced Cytidine Deaminase (AID).

Published in:

Creation Research Society Quarterly, 2016, v. 52, n. 4, p. 265

By:

Lightner, Jean

Publication type:

Article

The APOBEC3B c.783delG Truncating Mutation Is Not Associated with an Increased Risk of Breast Cancer in the Polish Population.

Published in:

Genes, 2023, v. 14, n. 7, p. 1329, doi. 10.3390/genes14071329

By:

Gliniewicz, Katarzyna;
Kluźniak, Wojciech;
Wokołorczyk, Dominika;
Huzarski, Tomasz;
Stempa, Klaudia;
Rudnicka, Helena;
Jakubowska, Anna;
Szwiec, Marek;
Jarkiewicz-Tretyn, Joanna;
Naczk, Mariusz;
Kluz, Tomasz;
Dębniak, Tadeusz;
Gronwald, Jacek;
Lubiński, Jan;
Narod, Steven A.;
Akbari, Mohammad R.;
Cybulski, Cezary

Publication type:

Article

Unravelling the Sequential Interplay of Mutational Mechanisms during Clonal Evolution in Relapsed Pediatric Acute Lymphoblastic Leukemia.

Published in:

Genes, 2021, v. 12, n. 2, p. 214, doi. 10.3390/genes12020214

By:

Antić, Željko;
Lelieveld, Stefan H.;
van der Ham, Cédric G.;
Sonneveld, Edwin;
Hoogerbrugge, Peter M.;
Kuiper, Roland P.;
Holmfeldt, Linda

Publication type:

Article

Genome editing in rice.

Published in:

2020

By:

Endo, Masaki;
Toki, Seiichi

Publication type:

Editorial

Combined inhibition of histone deacetylase and cytidine deaminase improves epigenetic potency of decitabine in colorectal adenocarcinomas.

Published in:

Clinical Epigenetics, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13148-023-01500-1

By:

Tang, Zijiao;
Liu, Lu;
Borlak, Jürgen

Publication type:

Article

Developing a CRISPR‐assisted base‐editing system for genome engineering of Pseudomonas chlororaphis.

Published in:

Microbial Biotechnology, 2022, v. 15, n. 9, p. 2324, doi. 10.1111/1751-7915.14075

By:

Yue, Sheng‐Jie;
Huang, Peng;
Li, Song;
Cai, Yu‐Yuan;
Wang, Wei;
Zhang, Xue‐Hong;
Nikel, Pablo I.;
Hu, Hong‐Bo

Publication type:

Article

Mitochondrial DNA editing in potato through mitoTALEN and mitoTALECD: molecular characterization and stability of editing events.

Published in:

Plant Methods, 2024, v. 20, n. 1, p. 1, doi. 10.1186/s13007-023-01124-9

By:

Nicolia, Alessandro;
Scotti, Nunzia;
D'Agostino, Nunzio;
Festa, Giovanna;
Sannino, Lorenza;
Aufiero, Gaetano;
Arimura, Shin-ichi;
Cardi, Teodoro

Publication type:

Article

Structural and Biochemical Studies on the Reaction Mechanism of Uridine-Cytidine Kinase.

Published in:

Protein Journal, 2015, v. 34, n. 6, p. 411, doi. 10.1007/s10930-015-9636-8

By:

Tomoike, Fumiaki;
Nakagawa, Noriko;
Kuramitsu, Seiki;
Masui, Ryoji

Publication type:

Article

An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers.

Published in:

Nature Genetics, 2015, v. 47, n. 9, p. 1067, doi. 10.1038/ng.3378

By:

Sterling, Joan F;
Malc, Ewa P;
Fargo, David C;
Mieczkowski, Piotr A;
Kwiatkowski, David J;
Saini, Natalie;
Kim, Jaegil;
Roberts, Steven A;
Getz, Gad;
Chan, Kin;
Gordenin, Dmitry A;
Klimczak, Leszek J

Publication type:

Article

AID mistargeting to enhancers.

Published in:

Nature Genetics, 2015, v. 47, n. 2, p. 105, doi. 10.1038/ng.3209

By:

Niemitz, Emily

Publication type:

Article

Association of a germline copy number polymorphism of APOBEC3A and APOBEC3B with burden of putative APOBEC-dependent mutations in breast cancer.

Published in:

Nature Genetics, 2014, v. 46, n. 5, p. 487, doi. 10.1038/ng.2955

By:

Nik-Zainal, Serena;
Wedge, David C;
Alexandrov, Ludmil B;
Petljak, Mia;
Butler, Adam P;
Bolli, Niccolo;
Davies, Helen R;
Knappskog, Stian;
Martin, Sancha;
Papaemmanuil, Elli;
Ramakrishna, Manasa;
Shlien, Adam;
Simonic, Ingrid;
Xue, Yali;
Tyler-Smith, Chris;
Campbell, Peter J;
Stratton, Michael R

Publication type:

Article

Evidence for APOBEC3B mutagenesis in multiple human cancers.

Published in:

Nature Genetics, 2013, v. 45, n. 9, p. 977, doi. 10.1038/ng.2701

By:

Burns, Michael B;
Temiz, Nuri A;
Harris, Reuben S

Publication type:

Article

An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers.

Published in:

Nature Genetics, 2013, v. 45, n. 9, p. 970, doi. 10.1038/ng.2702

By:

Roberts, Steven A;
Lawrence, Michael S;
Klimczak, Leszek J;
Grimm, Sara A;
Fargo, David;
Stojanov, Petar;
Kiezun, Adam;
Kryukov, Gregory V;
Carter, Scott L;
Saksena, Gordon;
Harris, Shawn;
Shah, Ruchir R;
Resnick, Michael A;
Getz, Gad;
Gordenin, Dmitry A

Publication type:

Article

A Rapid Approach for Identifying Cell Lines Lacking Functional Cytidine Deaminase.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 7, p. 3344, doi. 10.3390/ijms26073344

By:

Ligasová, Anna;
Kociánová, Markéta;
Koberna, Karel

Publication type:

Article

Low Bacterial Biomass in Human Pancreatic Cancer and Adjacent Normal Tissue.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 1, p. 140, doi. 10.3390/ijms26010140

By:

May, Michael S.;
Park, Heekuk;
Moallem, Dalia H.;
Seeram, Dwayne;
Dajiang, Sun;
Hibshoosh, Hanina;
Jamison, Jacob K.;
Uhlemann, Anne-Catrin;
Manji, Gulam A.

Publication type:

Article

The Link between Plasmodium falciparum Malaria and Endemic Burkitt’s Lymphoma—New Insight into a 50-Year-Old Enigma.

Published in:

PLoS Pathogens, 2016, v. 12, n. 1, p. 1, doi. 10.1371/journal.ppat.1005331

By:

Thorley-Lawson, David;
Deitsch, Kirk W.;
Duca, Karen A.;
Torgbor, Charles

Publication type:

Article

Promiscuous RNA Binding Ensures Effective Encapsidation of APOBEC3 Proteins by HIV-1.

Published in:

PLoS Pathogens, 2015, v. 11, n. 1, p. 1, doi. 10.1371/journal.ppat.1004609

By:

Apolonia, Luis;
Schulz, Reiner;
Curk, Tomaž;
Rocha, Paula;
Swanson, Chad M.;
Schaller, Torsten;
Ule, Jernej;
Malim, Michael H.

Publication type:

Article

Human APOBEC3 Induced Mutation of Human Immunodeficiency Virus Type-1 Contributes to Adaptation and Evolution in Natural Infection.

Published in:

PLoS Pathogens, 2014, v. 10, n. 7, p. 1, doi. 10.1371/journal.ppat.1004281

By:

Kim, Eun-Young;
Lorenzo-Redondo, Ramon;
Little, Susan J.;
Chung, Yoon-Seok;
Phalora, Prabhjeet K.;
Maljkovic Berry, Irina;
Archer, John;
Penugonda, Sudhir;
Fischer, Will;
Richman, Douglas D.;
Bhattacharya, Tanmoy;
Malim, Michael H.;
Wolinsky, Steven M.

Publication type:

Article

Different Modes of Retrovirus Restriction by Human APOBEC3A and APOBEC3G <i>In Vivo</i>.

Published in:

PLoS Pathogens, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.ppat.1004145

By:

Stavrou, Spyridon;
Crawford, Daniel;
Blouch, Kristin;
Browne, Edward P.;
Kohli, Rahul M.;
Ross, Susan R.

Publication type:

Article

A Role for Host Activation-Induced Cytidine Deaminase in Innate Immune Defense against KSHV.

Published in:

PLoS Pathogens, 2013, v. 9, n. 11, p. 1, doi. 10.1371/journal.ppat.1003748

By:

Bekerman, Elena;
Jeon, Diana;
Ardolino, Michele;
Coscoy, Laurent

Publication type:

Article

Uracil DNA Glycosylase Counteracts APOBEC3G-Induced Hypermutation of Hepatitis B Viral Genomes: Excision Repair of Covalently Closed Circular DNA

Published in:

PLoS Pathogens, 2013, v. 9, n. 5, p. 1, doi. 10.1371/journal.ppat.1003361

By:

Kitamura, Kouichi;
Wang, Zhe;
Chowdhury, Sajeda;
Simadu, Miyuki;
Koura, Miki;
Muramatsu, Masamichi

Publication type:

Article

HIV Restriction by APOBEC3 in Humanized Mice.

Published in:

PLoS Pathogens, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.ppat.1003242

By:

Krisko, John F.;
Martinez-Torres, Francisco;
Foster, John L.;
Victor Garcia, J.

Publication type:

Article

AID Activity in B Cells Strongly Correlates with Polyclonal Antibody Affinity Maturation in-vivo Following Pandemic 2009-H1N1 Vaccination in Humans.

Published in:

PLoS Pathogens, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.ppat.1002920

By:

Khurana, Surender;
Frasca, Daniela;
Blomberg, Bonnie;
Golding, Hana

Publication type:

Article

A compact Cas9 ortholog from Staphylococcus Auricularis (SauriCas9) expands the DNA targeting scope.

Published in:

PLoS Biology, 2020, v. 18, n. 3, p. 1, doi. 10.1371/journal.pbio.3000686

By:

Hu, Ziying;
Wang, Shuai;
Zhang, Chengdong;
Gao, Ning;
Li, Miaomiao;
Wang, Deqian;
Wang, Daqi;
Liu, Dong;
Liu, Huihui;
Ong, Sang-Ging;
Wang, Hongyan;
Wang, Yongming

Publication type:

Article

Electronic Modifications of Fluorescent Cytidine Analogues Control Photophysics and Fluorescent Responses to Base Stacking and Pairing.

Published in:

Chemistry - A European Journal, 2019, v. 25, n. 5, p. 1249, doi. 10.1002/chem.201803653

By:

Teppang, Kristine L.;
Lee, Raymond W.;
Burns, Dillon D.;
Turner, M. Benjamin;
Lokensgard, Melissa E.;
Cooksy, Andrew L.;
Purse, Byron W.

Publication type:

Article

Engineering of a Cytidine 5′-Monophosphate-Sialic Acid Synthetase for Improved Tolerance to Functional Sialic Acids.

Published in:

Advanced Synthesis & Catalysis, 2013, v. 355, n. 18, p. 3597, doi. 10.1002/adsc.201300568

By:

Yi, Dong;
He, Ning;
Kickstein, Michael;
Metzner, Julia;
Weiß, Martin;
Berry, Alan;
Fessner, Wolf ‐ Dieter

Publication type:

Article

Impact of CDA Dynamics on Clinical Outcome of Patients With AML or High‐Risk MDS Treated With Nucleoside Analogs.

Published in:

Hematological Oncology, 2025, v. 43, n. 2, p. 1, doi. 10.1002/hon.70057

By:

Collomb, Erwann;
Bourguignon, Laurent;
Tichadou, Antoine;
Roche, Pauline;
Berton, Guillaume;
Ciccolini, Joseph;
Colle, Julien;
Farnault, Laure;
Costello, Régis;
Fanciullino, Raphaëlle;
Venton, Geoffroy

Publication type:

Article

Upregulation of cytidine deaminase in NAT1 knockout breast cancer cells.

Published in:

Journal of Cancer Research & Clinical Oncology, 2023, v. 149, n. 8, p. 5047, doi. 10.1007/s00432-022-04436-w

By:

Hong, Kyung U.;
Tagnedji, Afi H.;
Doll, Mark A.;
Walls, Kennedy M.;
Hein, David W.

Publication type:

Article

Research on the influence of APOBEC family on the occurrence, diagnosis, and treatment of various tumors.

Published in:

Journal of Cancer Research & Clinical Oncology, 2023, v. 149, n. 1, p. 357, doi. 10.1007/s00432-022-04395-2

By:

Yang, Jing;
Hou, Jiali;
Li, Mengxia

Publication type:

Article

A bug in the resistance to EGFR inhibitors: is there a role for Mycoplasma and cytidine deaminase in reducing the activity of osimertinib in lung cancer patients?

Published in:

2021

By:

Leonetti, Alessandro;
Carbone, Daniela;
Gregori, Alessandro;
Tiseo, Marcello;
Peters, Godefridus J.;
Deng, Dongmei;
Giovannetti, Elisa

Publication type:

Letter

Activation-induced cytidine deaminase: in sickness and in health.

Published in:

Journal of Cancer Research & Clinical Oncology, 2020, v. 146, n. 11, p. 2721, doi. 10.1007/s00432-020-03348-x

By:

Rios, Leonardo Alves de Souza;
Cloete, Benjamin;
Mowla, Shaheen

Publication type:

Article

Expression of activation-induced cytidine deaminase is associated with a poor prognosis of diffuse large B cell lymphoma patients treated with CHOP-based chemotherapy.

Published in:

Journal of Cancer Research & Clinical Oncology, 2016, v. 142, n. 1, p. 27, doi. 10.1007/s00432-015-2001-7

By:

Kawamura, Kiyoko;
Wada, Akihiko;
Wang, Ji-Yang;
Li, Quanhai;
Ishii, Akihiro;
Tsujimura, Hideki;
Takagi, Toshiyuki;
Itami, Makiko;
Tada, Yuji;
Tatsumi, Koichiro;
Shimada, Hideaki;
Hiroshima, Kenzo;
Tagawa, Masatoshi

Publication type:

Article

Support of BCP-ALL-cells by autologous bone marrow Th-cells involves induction of AID expression but not widespread AID off-target mutagenesis.

Published in:

Cancer Immunology, Immunotherapy, 2021, v. 70, n. 8, p. 2275, doi. 10.1007/s00262-020-02835-x

By:

Traxel, Sabrina;
Lehmann, Julia;
Richard, Stefanie;
Sidorov, Semjon;
Niggli, Felix;
Berger, Christoph;
Nadal, David;
Bürgler, Simone

Publication type:

Article

Activation-induced cytidine deaminase (AID) linking immunity, chronic inflammation, and cancer.

Published in:

Cancer Immunology, Immunotherapy, 2012, v. 61, n. 9, p. 1591, doi. 10.1007/s00262-012-1255-z

By:

Mechtcheriakova, Diana;
Svoboda, Martin;
Meshcheryakova, Anastasia;
Jensen-Jarolim, Erika

Publication type:

Article

Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching.

Published in:

Nature, 2015, v. 525, n. 7567, p. 134, doi. 10.1038/nature14970

By:

Dong, Junchao;
Panchakshari, Rohit A.;
Zhang, Tingting;
Zhang, Yu;
Hu, Jiazhi;
Volpi, Sabrina A.;
Meyers, Robin M.;
Ho, Yu-Jui;
Du, Zhou;
Robbiani, Davide F.;
Meng, Feilong;
Gostissa, Monica;
Nussenzweig, Michel C.;
Manis, John P.;
Alt, Frederick W.

Publication type:

Article