Works matching DE "TRANSCRIPTIONAL repressor CTCF"

Results: 113

Sex Chromosomes Do It Differently.

Published in:

PLoS Biology, 2016, v. 14, n. 10, p. 1, doi. 10.1371/journal.pbio.2001096

By:

Richardson, Lauren A.

Publication type:

Article

Metabolic engineering of E. coli for the production of O-succinyl-L-homoserine with high yield.

Published in:

3 Biotech, 2018, v. 8, n. 7, p. 1, doi. 10.1007/s13205-018-1332-x

By:

Huang, Jian-Feng;
Zhang, Bo;
Shen, Zhen-Yang;
Liu, Zhi-Qiang;
Zheng, Yu-Guo

Publication type:

Article

OFP1 Interaction with ATH1 Regulates Stem Growth, Flowering Time and Flower Basal Boundary Formation in Arabidopsis.

Published in:

Genes, 2018, v. 9, n. 8, p. 399, doi. 10.3390/genes9080399

By:

Sun, Lili;
Zhang, Shuquan;
Xie, Dongwei;
Liang, Chunbo;
Huang, Wengong;
Fan, Lijuan;
Fang, Yuyan;
Zhang, Liguo;
Chang, Ying;
Zhang, Xiaofei

Publication type:

Article

Making Sense of the Tangle: Insights into Chromatin Folding and Gene Regulation.

Published in:

Genes, 2016, v. 7, n. 10, p. 71, doi. 10.3390/genes7100071

By:

Ill-Min Chung;
Ketharnathan, Sarada;
Seung-Hyun Kim;
Thiruvengadam, Muthu;
Rani, Mari Kavitha;
Rajakumar, Govindasamy

Publication type:

Article

Characterization of redox-active cysteine residues of persulfide-responsive transcriptional repressor SqrR.

Published in:

Communicative & Integrative Biology, 2017, v. 10, n. 4, p. 1, doi. 10.1080/19420889.2017.1329786

By:

Shimizu, Takayuki;
Masuda, Shinji

Publication type:

Article

Transcriptional repressor REST drives lineage stage–specific chromatin compaction at Ptch1 and increases AKT activation in a mouse model of medulloblastoma.

Published in:

Science Signaling, 2019, v. 12, n. 565, p. N.PAG, doi. 10.1126/scisignal.aan8680

By:

Dobson, Tara H. W.;
Tao, Rong-Hua;
Swaminathan, Jyothishmathi;
Maegawa, Shinji;
Shaik, Shavali;
Bravo-Alegria, Javiera;
Sharma, Ajay;
Kennis, Bridget;
Yang, Yanwen;
Callegari, Keri;
Haltom, Amanda R.;
Taylor, Pete;
Kogiso, Mari;
Qi, Lin;
Khatua, Soumen;
Goldman, Stewart;
Lulla, Rishi R.;
Fangusaro, Jason;
MacDonald, Tobey J.;
Li, Xiao-Nan

Publication type:

Article

Test Yourself #4, 2017.

Published in:: Journal of the Association of Genetic Technologists, 2017, v. 43, n. 4, p. 218
Publication type:: Article

CTCF Expression is Essential for Somatic Cell Viability and Protection Against Cancer.

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 12, p. 3832, doi. 10.3390/ijms19123832

By:

Bailey, Charles G;
Metierre, Cynthia;
Feng, Yue;
Baidya, Kinsha;
Filippova, Galina N;
Loukinov, Dmitri I;
Lobanenkov, Victor V;
Semaan, Crystal;
Rasko, John EJ

Publication type:

Article

DNA Supercoiling, Topoisomerases, and Cohesin: Partners in Regulating Chromatin Architecture?

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 3, p. 884, doi. 10.3390/ijms19030884

By:

Björkegren, Camilla;
Baranello, Laura

Publication type:

Article

Developmental interneuron subtype deficits after targeted loss of Arx.

Published in:

2016

By:

Marsh, Eric D.;
Nasrallah, MacLean Pancoast;
Walsh, Caroline;
Murray, Kaitlin A.;
Sunnen, C. Nicole;
McCoy, Almedia;
Golden, Jeffrey A.;
Nicole Sunnen, C

Publication type:

journal article

Inclusion of BLIMP-1 effector regulatory T cells improves the Immunoscore in a cohort of New Zealand colorectal cancer patients: a pilot study.

Published in:

Cancer Immunology, Immunotherapy, 2017, v. 66, n. 4, p. 515, doi. 10.1007/s00262-016-1951-1

By:

Ward-Hartstonge, Kirsten;
McCall, John;
McCulloch, Timothy;
Kamps, Ann-Kristin;
Girardin, Adam;
Cretney, Erika;
Munro, Fran;
Kemp, Roslyn

Publication type:

Article

Wiz binds active promoters and CTCF-binding sites and is required for normal behaviour in the mouse.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.15082

By:

Isbel, Luke;
Prokopuk, Lexie;
Haoyu Wu;
Daxinger, Lucia;
Oey, Harald;
Spurling, Alex;
Lawther, Adam J.;
Hale, Matthew W.;
Whitelaw, Emma

Publication type:

Article

T5: Yin and Yang regulation of GC reaction.

Published in:: 2018
Publication type:: Abstract

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons.

Published in:

Journal of Neuroscience, 2019, v. 39, n. 1, p. 177, doi. 10.1523/JNEUR0SCI.3496-17.2018

By:

Elbert, Adrienne;
Vogt, Daniel;
Watson, Ashley;
Levy, Michael;
Yan Jiang;
Brûlé, Emilie;
Rowland, Megan E.;
Rubenstein, John;
Berube, Nathalie G.

Publication type:

Article

Remote Memory and Cortical Synaptic Plasticity Require Neuronal CCCTC-Binding Factor (CTCF).

Published in:

Journal of Neuroscience, 2018, v. 38, n. 22, p. 5042, doi. 10.1523/JNEUROSCI.2738-17.2018

By:

Somi Kim;
Nam-Kyung Yu;
Kyu-Won Shim;
Ji-il Kim;
Hyopil Kim;
Dae Hee Han;
Ja Eun Choi;
Seung-Woo Lee;
Dong Il Choi;
Myung Won Kim;
Dong-Sung Lee;
Kyungmin Lee;
Niels Galjart;
Yong-Seok Lee;
Jae-Hyung Lee;
Bong-Kiun Kaang

Publication type:

Article

Dopamine Triggers CTCF-Dependent Morphological and Genomic Remodeling of Astrocytes.

Published in:

Journal of Neuroscience, 2018, v. 38, n. 21, p. 4846, doi. 10.1523/JNEUROSCI.3349-17.2018

By:

O'Donovan, Bernadette;
Critchfield, Peyton;
Ortinski, Pavel I.;
Galloway, Ashley;
Adeluyi, Adewale;
Fisher, Miranda L.;
Rao, Chintada Nageswara;
Sajish, Mathew;
Turner, Jill R.

Publication type:

Article

Downregulation of Spermine Augments Dendritic Persistent Sodium Currents and Synaptic Integration after Status Epilepticus.

Published in:

Journal of Neuroscience, 2015, v. 35, n. 46, p. 15240, doi. 10.1523/JNEUROSCI.0493-15.2015

By:

Royeck, Michel;
Kelly, Tony;
Opitz, Thoralf;
Otte, David-Marian;
Rennhack, Andreas;
Woitecki, Anne;
Pitsch, Julika;
Becker, Albert;
Schoch, Susanne;
Kaupp, Ulrich Benjamin;
Yaari, Yoel;
Zimmer, Andreas;
Beck, Heinz

Publication type:

Article

The influence of pro-longevity gene Gclc overexpression on the age-dependent changes in Drosophila transcriptome and biological functions.

Published in:

BMC Genomics, 2016, v. 17, p. 273, doi. 10.1186/s12864-016-3356-0

By:

Moskalev, Alexey;
Shaposhnikov, Mikhail;
Proshkina, Ekaterina;
Belyi, Alexey;
Fedintsev, Alexander;
Zhikrivetskaya, Svetlana;
Guvatova, Zulfiya;
Sadritdinova, Asiya;
Snezhkina, Anastasia;
Krasnov, George;
Kudryavtseva, Anna

Publication type:

Article

Correction: The TIE1 transcriptional repressor controls shoot branching by directly repressing BRANCHED1 in Arabidopsis.

Published in:

2018

By:

Yang, Yan;
Nicolas, Michael;
Zhang, Jinzhe;
Yu, Hao;
Guo, Dongshu;
Yuan, Rongrong;
Zhang, Tiantian;
Yang, Jianzhao;
Cubas, Pilar;
Qin, Genji

Publication type:

Correction Notice

Predicting CTCF-mediated chromatin loops using CTCF-MP.

Published in:

Bioinformatics, 2018, v. 34, n. 13, p. i133, doi. 10.1093/bioinformatics/bty248

By:

Zhang, Ruochi;
Wang, Yuchuan;
Yang, Yang;
Zhang, Yang;
Ma, Jian

Publication type:

Article

Characterizing leader sequences of CRISPR loci.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i576, doi. 10.1093/bioinformatics/btw454

By:

Alkhnbashi, Omer S.;
Shah, Shiraz A.;
Garrett, Roger A.;
Saunders, Sita J.;
Costa, Fabrizio;
Backofen, Rolf

Publication type:

Article

High-resolution TADs reveal DNA sequences underlying genome organization in flies.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02525-w

By:

Ramírez, Fidel;
Arrigoni, Laura;
Kin Chung Lam;
Akhtar, Asifa;
Manke, Thomas;
Bhardwaj, Vivek;
Grüning, Björn A.;
Villaveces, José;
Habermann, Bianca

Publication type:

Article

Sub-kb Hi-C in D. melanogaster reveals conserved characteristics of TADs between insect and mammalian cells.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02526-9

By:

Qi Wang;
Qiu Sun;
Czajkowsky, Daniel M.;
Zhifeng Shao

Publication type:

Article

Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation.

Published in:

PLoS Pathogens, 2015, v. 11, n. 11, p. 1, doi. 10.1371/journal.ppat.1005308

By:

Kim, Sang Hu;
Clark, Shawn T.;
Surendra, Anuradha;
Copeland, Julia K.;
Wang, Pauline W.;
Ammar, Ron;
Collins, Cathy;
Tullis, D. Elizabeth;
Nislow, Corey;
Hwang, David M.;
Guttman, David S.;
Cowen, Leah E.

Publication type:

Article

Suboptimal Global Transcriptional Response Increases the Harmful Effects of Loss-of-Function Mutations.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 3, p. 1137, doi. 10.1093/molbev/msaa280

By:

Kovács, Károly;
Farkas, Zoltán;
Bajić, Djordje;
Kalapis, Dorottya;
Daraba, Andreea;
Almási, Karola;
Kintses, Bálint;
Bódi, Zoltán;
Notebaart, Richard A;
Poyatos, Juan F;
Kemmeren, Patrick;
Holstege, Frank C P;
Pál, Csaba;
Papp, Balázs

Publication type:

Article

CTCF and Sgfl1 proteins form alternative complexes with ENY2 proteins.

Published in:

Doklady Biochemistry & Biophysics, 2016, v. 468, n. 1, p. 180, doi. 10.1134/S1607672916030054

By:

Bonchuk, A.;
Georgiev, P.;
Maksimenko, O.

Publication type:

Article

Transcription profile analysis of the endometrium revealed molecular markers of the personalized ‘window of implantation’ during in vitro fertilization.

Published in:

Gynecological Endocrinology, 2017, v. 33, p. 22, doi. 10.1080/09513590.2017.1404236

By:

Burmenskaya, O. V.;
Bozhenko, V. K.;
Smolnikova, V. Yu.;
Kalinina, E. A.;
Korneeva, I. E.;
Donnikov, A. E.;
Beyk, Е. P.;
Naumov, V. A.;
Aleksandrova, N. V.;
Borovikov, P. I.;
Trofimov, D. Y.

Publication type:

Article

MicroRNA‑153 suppresses human laryngeal squamous cell carcinoma migration and invasion by targeting the SNAI1 gene.

Published in:

Oncology Letters, 2018, v. 16, n. 4, p. 5075, doi. 10.3892/ol.2018.9302

By:

Zhang, Binbin;
Fu, Tao;
Zhang, Lun

Publication type:

Article

Expression profile and promoter analysis of HEPIS.

Published in:

Experimental & Therapeutic Medicine, 2018, v. 15, n. 1, p. 569, doi. 10.3892/etm.2017.5374

By:

Hu, Fen;
Zhang, Yunfeng

Publication type:

Article

Control of directionality of chromatin folding for the inter- and intra-domain contacts at the Tfap2c–Bmp7 locus.

Published in:

Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0221-1

By:

Tsujimura, Taro;
Takase, Osamu;
Yoshikawa, Masahiro;
Sano, Etsuko;
Hayashi, Matsuhiko;
Takato, Tsuyoshi;
Toyoda, Atsushi;
Okano, Hideyuki;
Hishikawa, Keiichi

Publication type:

Article

Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure.

Published in:

Epigenetics & Chromatin, 2017, v. 10, p. 1, doi. 10.1186/s13072-017-0142-4

By:

Ulianov, Sergey V.;
Galitsyna, Aleksandra A.;
Flyamer, Ilya M.;
Golov, Arkadiy K.;
Khrameeva, Ekaterina E.;
Imakaev, Maxim V.;
Abdennur, Nezar A.;
Gelfand, Mikhail S.;
Gavrilov, Alexey A.;
Razin, Sergey V.

Publication type:

Article

Links between DNA methylation and nucleosome occupancy in the human genome.

Published in:

Epigenetics & Chromatin, 2017, v. 10, p. 1, doi. 10.1186/s13072-017-0125-5

By:

Collings, Clayton K.;
Anderson, John N.

Publication type:

Article

Genetic variability and functional implication of the long control region in HPV-16 variants in Southwest China.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182388

By:

Xi, Juemin;
Chen, Junying;
Xu, Miaoling;
Yang, Hongying;
Luo, Jia;
Pan, Yue;
Wang, Xiaodan;
Qiu, Lijuan;
Yang, Jiajia;
Sun, Qiangming

Publication type:

Article

PEG3 control on the mammalian MSL complex.

Published in:

PLoS ONE, 2017, v. 12, n. 6, p. 1, doi. 10.1371/journal.pone.0178363

By:

Ye, An;
Kim, Hana;
Kim, Joomyeong

Publication type:

Article

CTCF-Mediated and Pax6-Associated Gene Expression in Corneal Epithelial Cell-Specific Differentiation.

Published in:

PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162071

By:

Tsui, Shanli;
Wang, Jie;
Wang, Ling;
Dai, Wei;
Lu, Luo

Publication type:

Article

PRDM5 Expression and Essential Role After Acute Spinal Cord Injury in Adult Rat.

Published in:

Neurochemical Research, 2016, v. 41, n. 12, p. 3333, doi. 10.1007/s11064-016-2066-y

By:

Liu, Jie;
Wu, Weijie;
Hao, Jie;
Yu, Mingchen;
Liu, Jin;
Chen, Xinlei;
Qian, Rong;
Zhang, Feng

Publication type:

Article

Conformational changes in inhibitory PAS domain protein associated with binding of HIF-1α and Bcl-x<sub>L</sub> in living cells.

Published in:

Journal of Biochemistry, 2017, v. 161, n. 3, p. 291, doi. 10.1093/jb/mvw068

By:

Shuya Kasai;
Shinji Kajimoto;
Yuma Ito;
Tomo Saito;
Ken-ichi Yasumoto;
Makio Tokunaga;
Kumiko Sakata-Sogawa;
Hiroshi Fukumura;
Kazuhiro Sogawa

Publication type:

Article

A Zinc Finger Transcriptional Repressor Confers Pleiotropic Effects on Rice Growth and Drought Tolerance by Down-Regulating Stress-Responsive Genes.

Published in:

Plant & Cell Physiology, 2018, v. 59, n. 10, p. 2129, doi. 10.1093/pcp/pcy133

By:

Yuan, Xi;
Huang, Peng;
Wang, Ruqin;
Li, Haoyuan;
Lv, Xueqing;
Duan, Min;
Tang, Haijuan;
Zhang, Hongsheng;
Huang, Ji

Publication type:

Article

Assessing the Role of ETHYLENE RESPONSE FACTOR Transcriptional Repressors in Salicylic Acid-Mediated Suppression of Jasmonic Acid-Responsive Genes.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 2, p. 266, doi. 10.1093/pcp/pcw187

By:

Caarls, Lotte;
Van der Does, Dieuwertje;
Hickman, Richard;
Jansen, Wouter;
Van Verk, Marcel C.;
Proietti, Silvia;
Lorenzo, Oscar;
Solano, Roberto;
Pieterse, Corné M. J.;
Van Wees, Saskia C. M.

Publication type:

Article

Drought-Up-Regulated TaNAC69-1 is a Transcriptional Repressor of TaSHY2 and TaIAA7, and Enhances Root Length and Biomass in Wheat.

Published in:

Plant & Cell Physiology, 2016, v. 57, n. 10, p. 2076, doi. 10.1093/pcp/pcw126

By:

Dandan Chen;
Richardson, Terese;
Shoucheng Chai;
McIntyre, C. Lynne;
Rae, Anne L.;
Gang-Ping Xue

Publication type:

Article

Neurodevelopmental disorder-associated ZBTB20 gene variants affect dendritic and synaptic structure.

Published in:

PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0203760

By:

Jones, Kelly A.;
Luo, Yue;
Dukes-Rimsky, Lynn;
Srivastava, Deepak P.;
Koul-Tewari, Richa;
Russell, Theron A.;
Shapiro, Lauren P.;
Srivastava, Anand K.;
Penzes, Peter

Publication type:

Article

Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing.

Published in:

PLoS ONE, 2018, v. 13, n. 4, p. 1, doi. 10.1371/journal.pone.0192634

By:

Pokholkova, Galina V.;
Demakov, Sergei A.;
Andreenkov, Oleg V.;
Andreenkova, Natalia G.;
Volkova, Elena I.;
Belyaeva, Elena S.;
Zhimulev, Igor F.

Publication type:

Article

Ssn6-Tup1 global transcriptional co-repressor: Role of the N-terminal glutamine-rich region of Ssn6.

Published in:

PLoS ONE, 2017, v. 12, n. 10, p. 1, doi. 10.1371/journal.pone.0186363

By:

Tartas, Athanassios;
Zarkadas, Christoforos;
Palaiomylitou, Maria;
Gounalaki, Niki;
Tzamarias, Dimitris;
Vlassi, Metaxia

Publication type:

Article

The emerging roles for the chromatin structure regulators CTCF and cohesin in neurodevelopment and behavior.

Published in:

Cellular & Molecular Life Sciences, 2018, v. 75, n. 7, p. 1205, doi. 10.1007/s00018-017-2706-7

By:

Davis, Liron;
Onn, Itay;
Elliott, Evan

Publication type:

Article

Corrigendum: Transcriptional regulator PRDM12 is essential for human pain perception.

Published in:

Nature Genetics, 2015, v. 47, n. 8, p. 962, doi. 10.1038/ng0815-962b

By:

Chen, Ya-Chun;
Auer-Grumbach, Michaela;
Matsukawa, Shinya;
Zitzelsberger, Manuela;
Themistocleous, Andreas C;
Strom, Tim M;
Samara, Chrysanthi;
Moore, Adrian W;
Cho, Lily Ting-Yin;
Young, Gareth T;
Weiss, Caecilia;
Schabhüttl, Maria;
Stucka, Rolf;
Schmid, Annina B;
Parman, Yesim;
Graul-Neumann, Luitgard;
Heinritz, Wolfram;
Passarge, Eberhard;
Watson, Rosemarie M;
Hertz, Jens Michael

Publication type:

Article

Functional footprinting of regulatory DNA.

Published in:

Nature Methods, 2015, v. 12, n. 10, p. 927, doi. 10.1038/nmeth.3554

By:

Vierstra, Jeff;
Reik, Andreas;
Chang, Kai-Hsin;
Stehling-Sun, Sandra;
Zhou, Yuanyue;
Hinkley, Sarah J;
Paschon, David E;
Zhang, Lei;
Psatha, Nikoletta;
Bendana, Yuri R;
O'Neil, Colleen M;
Song, Alexander H;
Mich, Andrea K;
Liu, Pei-Qi;
Lee, Gary;
Bauer, Daniel E;
Holmes, Michael C;
Orkin, Stuart H;
Papayannopoulou, Thalia;
Stamatoyannopoulos, George

Publication type:

Article

Androgen receptor functions as transcriptional repressor of cancer-associated fibroblast activation.

Published in:

2018

By:

Clocchiatti, Andrea;
Ghosh, Soumitra;
Procopio, Maria-Giuseppina;
Mazzeo, Luigi;
Bordignon, Pino;
Ostano, Paola;
Goruppi, Sandro;
Bottoni, Giulia;
Katarkar, Atul;
Levesque, Mitchell;
Kölblinger, Peter;
Dummer, Reinhard;
Neel, Victor;
Özdemir, Berna C.;
Dotto, G. Paolo

Publication type:

journal article

ZNF143 is involved in CTCF-mediated chromatin interactions by cooperation with cohesin and other partners.

Published in:

Molecular Biology, 2016, v. 50, n. 3, p. 431, doi. 10.1134/S0026893316030031

By:

Ye, B.-Y.;
Shen, W.-L.;
Wang, D.;
Li, P.;
Zhang, Z.;
Shi, M.-L.;
Zhang, Y.;
Zhang, F.-X.;
Zhao, Z.-H.

Publication type:

Article

Early vertebrate origin of CTCFL, a CTCF paralog, revealed by proximity-guided shark genome scaffolding.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71602-w

By:

Kadota, Mitsutaka;
Yamaguchi, Kazuaki;
Hara, Yuichiro;
Kuraku, Shigehiro

Publication type:

Article

SOX9 promotes tumor progression through the axis BMI1-p21CIP.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-019-57047-w

By:

Aldaz, Paula;
Otaegi-Ugartemendia, Maddalen;
Saenz-Antoñanzas, Ander;
Garcia-Puga, Mikel;
Moreno-Valladares, Manuel;
Flores, Juana M.;
Gerovska, Daniela;
Arauzo-Bravo, Marcos J.;
Samprón, Nicolas;
Matheu, Ander;
Carrasco-Garcia, Estefania

Publication type:

Article