Works matching DE "GENETIC transcription"

Results: 5000

Optimism and the conserved transcriptional response to adversity.

Published in:

2018

By:

Uchida, Yukiko;
Kitayama, Shinobu;
Akutsu, Satoshi;
Park, Jiyoung;
Cole, Steve W.

Publication type:

Journal Article

High Bendability of Short RNA-DNA Hybrid Duplex Revealed by Single-Molecule Cyclization and Molecular Dynamics Simulations.

Published in:

Biomolecules (2218-273X), 2025, v. 15, n. 5, p. 724, doi. 10.3390/biom15050724

By:

Wu, Bin;
Tian, Fujia;
Yang, Yajun;
Dai, Liang;
Zhang, Xinghua

Publication type:

Article

Regulation of Protein Synthesis at the Translational Level: Novel Findings in Cardiovascular Biology.

Published in:

Biomolecules (2218-273X), 2025, v. 15, n. 5, p. 692, doi. 10.3390/biom15050692

By:

Tsoy, Sergey;
Liu, Jiandong

Publication type:

Article

MECP2 mRNA Profile in Brain Tissues from a Rett Syndrome Patient and Three Human Controls: Mutated Allele Preferential Transcription and In Situ RNA Mapping.

Published in:

Biomolecules (2218-273X), 2025, v. 15, n. 5, p. 687, doi. 10.3390/biom15050687

By:

Mietto, Martina;
Montanari, Silvia;
Falzarano, Maria Sofia;
Manzati, Elisa;
Rimessi, Paola;
Fabris, Marina;
Selvatici, Rita;
Gualandi, Francesca;
Neri, Marcella;
Fortunato, Fernanda;
Foti, Miryam Rosa Stella;
Bigoni, Stefania;
Gessi, Marco;
Vacca, Marcella;
Torelli, Silvia;
Hayek, Joussef;
Ferlini, Alessandra

Publication type:

Article

Interaction Between PHF8 and a Segment of KDM2A, Which Is Controlled by the Phosphorylation Status at a Specific Serine in an Intrinsically Disordered Region of KDM2A, Regulates rRNA Transcription and Cell Proliferation in a Breast Cancer Cell Line.

Published in:

Biomolecules (2218-273X), 2025, v. 15, n. 5, p. 661, doi. 10.3390/biom15050661

By:

Okamoto, Kengo;
Mihara, Yutaro;
Ogasawara, Sachiko;
Murakami, Takashi;
Ohmori, Sinya;
Mori, Tetsuya;
Umata, Toshiyuki;
Kawasaki, Yuki;
Hirano, Kazuya;
Yano, Hirohisa;
Tsuneoka, Makoto

Publication type:

Article

Expression and functional analysis of the novel c-Mpl splice variant c-Mpl-D in acute myeloid leukemia.

Published in:

Acta Scientiarum Naturalium Universitatis Sunyatseni / Zhongshan Daxue Xuebao, 2025, v. 64, n. 3, p. 47, doi. 10.13471/j.cnki.acta.snus.ZR20240274

By:

WANG Jiasheng;
LI Fei;
HE Yue;
WU Leyan;
LI Chunmou;
ZENG Maozhen;
CHEN Junru;
CHEN Haisheng;
GUO Qiqi;
FAN Jiaxi;
WANG Qi;
HUANG Xuan;
CHEN Weiting;
ZHANG Qing

Publication type:

Article

Visual detection of Coxsackievirus A6 using a reverse transcription polymerase spiral reaction method.

Published in:

Frontiers in Cellular & Infection Microbiology, 2025, p. 1, doi. 10.3389/fcimb.2025.1563495

By:

Wang, Kun;
Ai, Yuanhang;
Luo, Juan;
Liang, Longying;
Zhang, Weiwei;
Cao, Guojun;
Zha, He;
Wu, Jie;
Lei, Kun;
Yao, Shifei;
Wu, Kaifeng

Publication type:

Article

Development of a Pentacistronic Ebola Virus Minigenome System.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 5, p. 688, doi. 10.3390/v17050688

By:

Zell, Brady N.;
Swenson, Vaille A.;
Lu, Shao-Chia;
Wang, Lin;
Barry, Michael A.;
Ebihara, Hideki;
Yamaoka, Satoko

Publication type:

Article

KRT6A Restricts Influenza A Virus Replication by Inhibiting the Nuclear Import and Assembly of Viral Ribonucleoprotein Complex.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 5, p. 671, doi. 10.3390/v17050671

By:

Chang, Yu;
Shan, Zhibo;
Shi, Wenjun;
Li, Qibing;
Wang, Yihan;
Wang, Bo;
Wang, Guangwen;
Chen, Hualan;
Jiang, Li;
Li, Chengjun

Publication type:

Article

NAC1/ACOX2 Axis as a Novel Therapeutic Target for Endometriosis-Related Ovarian Neoplasms.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4938, doi. 10.3390/ijms26104938

By:

Sonia, Shahataj Begum;
Nakayama, Kentaro;
Razia, Sultana;
Nakayama, Naomi;
Ishikawa, Masako;
Yamashita, Hitomi;
Kanno, Kosuke;
Takeshita, Haruo;
Zahan, Umme Farzana;
Sohel, Hasibul Islam;
Kyo, Satoru

Publication type:

Article

NDF/GLYR1 Promotes RNA Polymerase II Processivity via Pol II Binding and Nucleosome Destabilization.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4874, doi. 10.3390/ijms26104874

By:

Li, Ziwei;
Fei, Jia

Publication type:

Article

DNA Methylation and Alternative Splicing Safeguard Genome and Transcriptome After a Retrotransposition Burst in Arabidopsis thaliana.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4816, doi. 10.3390/ijms26104816

By:

Merkulov, Pavel;
Latypova, Anastasiia;
Tiurin, Kirill;
Serganova, Melania;
Kirov, Ilya

Publication type:

Article

Effect of Warfarin on Lifespan and Oxidative Stress Tolerance of Drosophila melanogaster.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4808, doi. 10.3390/ijms26104808

By:

Lavrenova, Anna;
Klychnikov, Oleg;
Ioutsi, Vitaliy;
Rodin, Igor;
Luneva, Oksana;
Nefedova, Lidia

Publication type:

Article

The RNA Chaperone Hfq and Small Non-Coding RNAs Modulate the Biofilm Formation of the Fish Pathogen Yersinia ruckeri.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4733, doi. 10.3390/ijms26104733

By:

Barros, María J.;
Acuña, Lillian G.;
Hernández-Vera, Felipe;
Vásquez-Arriagada, Pía;
Peñaloza, Diego;
Moya-Beltrán, Ana;
Cabezas-Mera, Fausto;
Parra, Francisco;
Gil, Fernando;
Fuentes, Juan A.;
Calderón, Iván L.

Publication type:

Article

DNAJC9 Binds to and Enhances the Transcription of Hepatitis B Virus cccDNA by Recruiting Histone H3.3.

Published in:

Journal of Medical Virology, 2025, v. 97, n. 5, p. 1, doi. 10.1002/jmv.70390

By:

Mao, Tianhao;
Du, Xinyu;
Li, Yukun;
Zhou, Zhao;
Li, Deyao;
Zheng, Liwei;
Zhang, Ting;
Li, Guixin;
Yang, Danli;
Chen, Xiangmei;
Lu, Fengmin

Publication type:

Article

Molecular Characterization and Expression of the Ecdysone Receptor and Ultraspiracle Genes in the Wheat Blossom Midge, Sitodiplosis mosellana.

Published in:

Insects (2075-4450), 2025, v. 16, n. 5, p. 537, doi. 10.3390/insects16050537

By:

Huang, Qitong;
Meng, Linqing;
Liu, Yuhan;
Zhu-Salzman, Keyan;
Cheng, Weining

Publication type:

Article

miR-128 represses L1 retrotransposition by binding directly to L1 RNA.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 10, p. 824, doi. 10.1038/nsmb.3090

By:

Hamdorf, Matthias;
Idica, Adam;
Zisoulis, Dimitrios G;
Gamelin, Lindsay;
Martin, Charles;
Sanders, Katie J;
Pedersen, Irene M

Publication type:

Article

Grab the wiggly tail: new insights into the dynamics of circadian clocks.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 6, p. 435, doi. 10.1038/nsmb.3039

By:

Hui, Ka Yi;
Ripperger, Jürgen A

Publication type:

Article

A dynamic DNA-repair complex observed by correlative single-molecule nanomanipulation and fluorescence.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 6, p. 452, doi. 10.1038/nsmb.3019

By:

Graves, Evan T;
Duboc, Camille;
Fan, Jun;
Stransky, François;
Leroux-Coyau, Mathieu;
Strick, Terence R

Publication type:

Article

Microprocessor mediates transcriptional termination of long noncoding RNA transcripts hosting microRNAs.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 4, p. 319, doi. 10.1038/nsmb.2982

By:

Dhir, Ashish;
Dhir, Somdutta;
Proudfoot, Nick J;
Jopling, Catherine L

Publication type:

Article

Micro-terminator: 'Hasta la vista, lncRNA!'.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 4, p. 279, doi. 10.1038/nsmb.3001

By:

Diederichs, Sven

Publication type:

Article

DNA methylation: old dog, new tricks?

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 11, p. 949, doi. 10.1038/nsmb.2910

By:

Spruijt, Cornelia G;
Vermeulen, Michiel

Publication type:

Article

Closed for business: exit-channel coupling to active site conformation in bacterial RNA polymerase.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 9, p. 741, doi. 10.1038/nsmb.2883

By:

Martin, Craig T;
Theis, Karsten

Publication type:

Article

RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 8, p. 686, doi. 10.1038/nsmb.2853

By:

Ni, Zuyao;
Xu, Chao;
Guo, Xinghua;
Hunter, Gerald O;
Kuznetsova, Olga V;
Tempel, Wolfram;
Marcon, Edyta;
Zhong, Guoqing;
Guo, Hongbo;
Kuo, Wei-Hung William;
Li, Joyce;
Young, Peter;
Olsen, Jonathan B;
Wan, Cuihong;
Loppnau, Peter;
El Bakkouri, Majida;
Senisterra, Guillermo A;
He, Hao;
Huang, Haiming;
Sidhu, Sachdev S

Publication type:

Article

A protein-RNA specificity code enables targeted activation of an endogenous human transcript.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 8, p. 732, doi. 10.1038/nsmb.2847

By:

Campbell, Zachary T;
Valley, Cary T;
Wickens, Marvin

Publication type:

Article

Transcription-generated torsional stress destabilizes nucleosomes.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 88, doi. 10.1038/nsmb.2723

By:

Teves, Sheila S;
Henikoff, Steven

Publication type:

Article

Gathering around Firre.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 3, p. 207, doi. 10.1038/nsmb.2782

By:

Nakagawa, Shinichi;
Hirano, Tatsuya

Publication type:

Article

RNA polymerase II termination involves C-terminal-domain tyrosine dephosphorylation by CPF subunit Glc7.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 2, p. 175, doi. 10.1038/nsmb.2753

By:

Schreieck, Amelie;
Easter, Ashley D;
Etzold, Stefanie;
Wiederhold, Katrin;
Lidschreiber, Michael;
Cramer, Patrick;
Passmore, Lori A

Publication type:

Article

Dynamics of yeast histone H2A and H2B phosphorylation in response to a double-strand break.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 103, doi. 10.1038/nsmb.2737

By:

Lee, Cheng-Sheng;
Lee, Kihoon;
Legube, Gaëlle;
Haber, James E

Publication type:

Article

Good cap/bad cap: how the cap-binding complex determines RNA fate.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 9, doi. 10.1038/nsmb.2751

By:

Müller-McNicoll, Michaela;
Neugebauer, Karla M

Publication type:

Article

Staufen1 senses overall transcript secondary structure to regulate translation.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 26, doi. 10.1038/nsmb.2739

By:

Ricci, Emiliano P;
Kucukural, Alper;
Cenik, Can;
Mercier, Blandine C;
Singh, Guramrit;
Heyer, Erin E;
Ashar-Patel, Ami;
Peng, Lingtao;
Moore, Melissa J

Publication type:

Article

CBC-ARS2 stimulates 3′-end maturation of multiple RNA families and favors cap-proximal processing.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1358, doi. 10.1038/nsmb.2720

By:

Hallais, Marie;
Pontvianne, Frédéric;
Andersen, Peter Refsing;
Clerici, Marcello;
Lener, Daniela;
Benbahouche, Nour El Houda;
Gostan, Thierry;
Vandermoere, Franck;
Robert, Marie-Cécile;
Cusack, Stephen;
Verheggen, Céline;
Jensen, Torben Heick;
Bertrand, Edouard

Publication type:

Article

Poly-combing the genome for RNA.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1344, doi. 10.1038/nsmb.2728

By:

Goff, Loyal A;
Rinn, John L

Publication type:

Article

TALEN-based knockout library for human microRNAs.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1458, doi. 10.1038/nsmb.2701

By:

Kim, Young-Kook;
Wee, Gabbine;
Park, Joha;
Kim, Jongkyu;
Baek, Daehyun;
Kim, Jin-Soo;
Kim, V Narry

Publication type:

Article

The human cap-binding complex is functionally connected to the nuclear RNA exosome.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1367, doi. 10.1038/nsmb.2703

By:

Andersen, Peter Refsing;
Domanski, Michal;
Kristiansen, Maiken S;
Storvall, Helena;
Ntini, Evgenia;
Verheggen, Celine;
Schein, Aleks;
Bunkenborg, Jakob;
Poser, Ina;
Hallais, Marie;
Sandberg, Rickard;
Hyman, Anthony;
LaCava, John;
Rout, Michael P;
Andersen, Jens S;
Bertrand, Edouard;
Jensen, Torben Heick

Publication type:

Article

Live visualization of chromatin dynamics with fluorescent TALEs.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 11, p. 1321, doi. 10.1038/nsmb.2680

By:

Miyanari, Yusuke;
Ziegler-Birling, Céline;
Torres-Padilla, Maria-Elena

Publication type:

Article

Transcriptional regulation by Polycomb group proteins.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1147, doi. 10.1038/nsmb.2669

By:

Di Croce, Luciano;
Helin, Kristian

Publication type:

Article

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1199, doi. 10.1038/nsmb.2662

By:

Balk, Bettina;
Maicher, André;
Dees, Martina;
Klermund, Julia;
Luke-Glaser, Sarah;
Bender, Katharina;
Luke, Brian

Publication type:

Article

Regulation of transcription by the MLL2 complex and MLL complex-associated AKAP95.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1156, doi. 10.1038/nsmb.2656

By:

Jiang, Hao;
Lu, Xiangdong;
Shimada, Miho;
Dou, Yali;
Tang, Zhanyun;
Roeder, Robert G

Publication type:

Article

The Microprocessor controls the activity of mammalian retrotransposons.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1173, doi. 10.1038/nsmb.2658

By:

Heras, Sara R;
Macias, Sara;
Plass, Mireya;
Fernandez, Noemí;
Cano, David;
Eyras, Eduardo;
Garcia-Perez, José L;
Cáceres, Javier F

Publication type:

Article

A bacterial-like mechanism for transcription termination by the Sen1p helicase in budding yeast.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 884, doi. 10.1038/nsmb.2592

By:

Porrua, Odil;
Libri, Domenico

Publication type:

Article

Structural mimicry in transcription regulation of human RNA polymerase II by the DNA helicase RECQL5.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 892, doi. 10.1038/nsmb.2596

By:

Kassube, Susanne A;
Jinek, Martin;
Fang, Jie;
Tsutakawa, Susan;
Nogales, Eva

Publication type:

Article

Transcription-dependent dynamic supercoiling is a short-range genomic force.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 3, p. 396, doi. 10.1038/nsmb.2517

By:

Kouzine, Fedor;
Gupta, Ashutosh;
Baranello, Laura;
Wojtowicz, Damian;
Ben-Aissa, Khadija;
Liu, Juhong;
Przytycka, Teresa M;
Levens, David

Publication type:

Article

Histone H2A.Z inheritance during the cell cycle and its impact on promoter organization and dynamics.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 11, p. 1076, doi. 10.1038/nsmb.2424

By:

Nekrasov, Maxim;
Amrichova, Jana;
Parker, Brian J;
Soboleva, Tatiana A;
Jack, Cameron;
Williams, Rohan;
Huttley, Gavin A;
Tremethick, David J

Publication type:

Article

Intimate liaison with SR proteins brings exon junction complexes to unexpected places.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 12, p. 1209, doi. 10.1038/nsmb.2454

By:

Mühlemann, Oliver

Publication type:

Article

Pause-itively engaged.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 11, p. 1067, doi. 10.1038/nsmb.2444

By:

Larochelle, Stéphane

Publication type:

Article

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1?

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 9, p. 948, doi. 10.1038/nsmb.2364

By:

Arnoult, Nausica;
Van Beneden, Amandine;
Decottignies, Anabelle

Publication type:

Article

Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 9, p. 884, doi. 10.1038/nsmb.2312

By:

Smolle, Michaela;
Venkatesh, Swaminathan;
Gogol, Madelaine M;
Li, Hua;
Zhang, Ying;
Florens, Laurence;
Washburn, Michael P;
Workman, Jerry L

Publication type:

Article

Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 7, p. 719, doi. 10.1038/nsmb.2327

By:

Taggart, Allison J;
DeSimone, Alec M;
Shih, Janice S;
Filloux, Madeleine E;
Fairbrother, William G

Publication type:

Article

Structural basis for the assembly and nucleic acid binding of the TREX-2 transcription-export complex.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 3, p. 328, doi. 10.1038/nsmb.2235

By:

Ellisdon, Andrew M;
Dimitrova, Lyudmila;
Hurt, Ed;
Stewart, Murray

Publication type:

Article