Works matching DE "GENOMICS"

Results: 5000

Genomic Landscape of Advanced Solid Tumors in Middle East and North Africa Using Circulating Tumor DNA in Routine Clinical Practice.

Published in:

Oncology, 2025, v. 103, n. 6, p. 508, doi. 10.1159/000541571

By:

Dawood, Shaheenah;
Sandhir, Nippun;
Akasheh, Marwan;
El Khoury, Maroun;
Otsmane, Sonia;
Alnassar, Muath;
Abulkhair, Omalkhair;
Farhat, Fadi;
Olsen, Steve

Publication type:

Article

Whole genome sequence analysis of a novel Streptomyces sp. BG6AG reveals its lipase production potential: optimization of the process through Taguchi experimental design.

Published in:

3 Biotech, 2025, v. 15, n. 7, p. 1, doi. 10.1007/s13205-025-04369-4

By:

Parwez, Zahra;
Behera, Subhransu Sekhar;
Panda, Ananta Narayan;
Gouda, Sudhansu Kumar;
Ray, Lopamudra

Publication type:

Article

RE: Comprehensive genome profiling for treatment decisions in patients with metastatic tumors: real-world evidence meta-analysis and registry data implementation Free.

Published in:

JNCI: Journal of the National Cancer Institute, 2025, v. 117, n. 6, p. 1283, doi. 10.1093/jnci/djaf079

By:

Yuan, Jing;
Yu, Jianxiong

Publication type:

Article

Comprehensive genome profiling for treatment decisions in patients with metastatic tumors: real-world evidence meta-analysis and registry data implementation Open Access.

Published in:

JNCI: Journal of the National Cancer Institute, 2025, v. 117, n. 6, p. 1117, doi. 10.1093/jnci/djaf015

By:

Zerdes, Ioannis;
Filis, Panagiotis;
Fountoukidis, Georgios;
El-Naggar, Ali Inan;
Kalofonou, Foteini;
D'Alessio, Antonio;
Pouptsis, Athanasios;
Foukakis, Theodoros;
Pentheroudakis, George;
Ahlgren, Johan;
Smith, Daniel;
Valachis, Antonios

Publication type:

Article

Modifiable risk factors and inflammation-related proteins in polymyalgia rheumatica: genome-wide meta-analysis and Mendelian randomization Open Access.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3012, doi. 10.1093/rheumatology/keae308

By:

Zhao, Sizheng Steven;
Mackie, Sarah L;
Larsson, Susanna C;
Burgess, Stephen;
Yuan, Shuai

Publication type:

Article

Genomic analysis association of tolerance to heat stress in subtropical Egyptian goats Raised in hot dry environment.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11748-x

By:

Aboul-Naga, Adel M.;
Alsamman, Alsamman M.;
Melak, Sherif;
Nassar, Ahmed E.;
Abdelsabour, Taha H.;
Gamal, Layaly;
Adley, Monica;
Elshafie, Mohmed H.

Publication type:

Article

Comparative genomic analysis reveals the emergence and dissemination of different Salmonella enterica serovar Gallinarum biovar Gallinarum lineages in Brazil.

Published in:

Avian Pathology, 2025, v. 54, n. 4, p. 476, doi. 10.1080/03079457.2025.2458601

By:

Kipper, Diéssy;
Orsi, Renato Hohl;
de Souza Zanetti, Nathalie;
De Carli, Silvia;
Mascitti, Andrea Karoline;
Fonseca, André Salvador Kazantzi;
Ikuta, Nilo;
Wiedmann, Martin;
Lunge, Vagner Ricardo

Publication type:

Article

Navigating phylogenetic conflict and evolutionary inference in plants with target-capture data.

Published in:

Australian Systematic Botany, 2025, v. 38, n. 3, p. 1, doi. 10.1071/SB24011

By:

Joyce, E. M.;
Schmidt-Lebuhn, A. N.;
Orel, H. K.;
Nge, F. J.;
Anderson, B. M.;
Hammer, T. A.;
McLay, T. G. B.

Publication type:

Article

Whole Genome Sequencing to Identify Novel Germline Fumarate Hydratase Mutation in Child With Bilateral Renal Cell Carcinoma.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 702, doi. 10.1111/cge.14723

By:

Kershaw, Christopher;
Demain, Leigh;
Baker, Eleanor;
Burghel, George;
Durkie, Miranda;
Forde, Claire;
Makin, Guy;
Cheesman, Edmund;
Warren, Anne;
Gokhale, David;
Schlecht, Helene;
Maher, Eamonn;
Oliveira, Pedro;
Woodward, Emma

Publication type:

Article

Whole-genome resequencing reveals positive selection and introgression signatures and genetic loci associated with early puberty traits in Chinese indigenous pigs.

Published in:

Genetics Selection Evolution, 2025, v. 57, n. 1, p. 1, doi. 10.1186/s12711-025-00975-1

By:

Cao, Minghao;
Yuan, Tiantian;
Li, Dong;
Wang, Yulong;
Zhang, Lin;
Sun, Jingchun;
Lv, Guangquan;
Ding, Rongrong;
Yu, Taiyong

Publication type:

Article

Primary pulmonary malignant melanoma with H3K27Me3 loss: A case report.

Published in:

2025

By:

Li, Houqiang;
Zheng, Lanqing;
Yu, Xunbin;
Chen, Linfeng;
Lv, Shanshan;
Chen, Xin

Publication type:

Case Study

Whole Genome Assembly, Annotation, and Comparative Genomic Analysis of Pandanus amaryllifolius.

Published in:

Plant Molecular Biology Reporter, 2025, v. 43, n. 2, p. 910, doi. 10.1007/s11105-024-01522-w

By:

Sidek, Norhafizah;
Tan, Boon Chin;
Mebus, Katharina;
Kikuchi, Shinji;
Teo, Chee How

Publication type:

Article

Analysis of clonal evolution in cancer: A computational perspective.

Published in:

Journal of Bioinformatics & Computational Biology, 2025, v. 23, n. 2, p. 1, doi. 10.1142/S0219720025310018

By:

Ribeiro, Paulo Henrique;
Simao, Adenilso

Publication type:

Article

Ancient genomes reveal the genetic structure and population interaction in the Central Plains of China during the Eastern Zhou Period.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1602625

By:

Wu, Xiyan;
Liu, Pengxiang;
Yan, Fei;
Jin, RongPeng;
Zhong, Canshuo;
Wang, Lin;
Chen, Ke;
Yang, Fan;
Nie, Linyi;
Liang, Jinteng;
Zhou, Yawei;
Ding, Baoxu

Publication type:

Article

Genomic insights into Kocuria : taxonomic revision and identification of five IAA-producing extremophiles.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1547983

By:

Li, Cong-Jian;
Jiang, Zhu-Ming;
Zhi, Xiao-Yang;
Chen, Hua-Hong;
Yu, Li-Yan;
Li, Guang-Fu;
Zhang, Yu-Qin

Publication type:

Article

Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.

Published in:

AMB Express, 2025, v. 15, n. 1, p. 1, doi. 10.1186/s13568-025-01894-6

By:

Gallardo-Camarena, Marco V.;
Reverchon, Frédérique;
Méndez-Bravo, Alfonso;
Torres-Acosta, Mario A.;
Licona-Cassani, Cuauhtémoc

Publication type:

Article

Genomic Analysis Suggests That Mitonuclear Coevolution Proceeds Over Rapid Timescales in the Amazonian Pipra Manakin Complex.

Published in:

Molecular Ecology, 2025, v. 34, n. 12, p. 1, doi. 10.1111/mec.17802

By:

Nikelski, Ellen;
Weir, Jason T.

Publication type:

Article

SARS-COV-2 mutations in North Rift, Kenya.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0325133

By:

Mbogori, Elius;
Thiongo, Kelvin;
Deng, Harrison Yunying;
Gikunyu, Caroline Wangui;
Cheriro, Winfrida;
Musyoki, Stanslaus;
Biegon, Richard;
Matoke-Muhia, Damaris;
Patel, Kirtika;
Liang, Binhua;
Songok, Elijah

Publication type:

Article

Two novel polyvalent phages: a promising approach for cross-order pathogen control in aquaculture.

Published in:

Virology Journal, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12985-025-02817-4

By:

Li, Chengcheng;
Yue, Yufei;
Yin, Rui;
Zhao, Jiulong;
Wang, Zengmeng;
Nair, Shailesh;
Zhang, Yongyu

Publication type:

Article

Genomic landscape of nosocomial Acinetobacter baumannii: A comprehensive analysis of the resistome, virulome, and mobilome.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-03246-7

By:

Pearl, Sara;
Anbarasu, Anand

Publication type:

Article

Variabilidad genética, estrés oxidativo e inflamación en poblaciones colombianas.

Published in:

Biomédica: Revista del Instituto Nacional de Salud, 2025, v. 45, n. 2, p. 244, doi. 10.7705/biomedica.7220

By:

Nicole Banguera, Dayan;
Giovanna Mejía, Lizeth;
Ramírez-Montano, Diana;
Perenguez-Verdugo, Marcela;
Castillo, Andrés

Publication type:

Article

Pairing between homologous sequences on the X and chromosome 3 in Drosophila male meiosis.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf059

By:

Hylton, Christopher A;
Hansen, Katie;
Dean, John E Tomkiel

Publication type:

Article

Enhancing the discriminatory power of polygenic scores for ADHD and autism in clinical and non-clinical samples.

Published in:

Journal of Neurodevelopmental Disorders, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s11689-025-09620-w

By:

Li, James J.;
He, Quanfa;
Dorn, Stephen;
Wang, Zihang;
Lu, Qiongshi

Publication type:

Article

Transcriptional characterization of sepsis in a LPS porcine model.

Published in:

Molecular Genetics & Genomics, 2025, v. 300, n. 1, p. 1, doi. 10.1007/s00438-025-02261-7

By:

Neill, Ryan

Publication type:

Article

Intervention of machine learning in bladder cancer research using multi-omics datasets: systematic review on biomarker identification.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02734-6

By:

Kiruba, Blessy;
Narayan, P. S. Athul;
Raj, Badhari;
Raj, S. Rohieth;
Mathew, Sam George;
Lulu, Sudhakaran Sajitha;
Sundararajan, Vino

Publication type:

Article

Transcriptomic Profiles and Functional Correlates of Cancer‐Related Fatigue: A Cross‐Sectional Study in Women Undergoing Cancer Treatment.

Published in:

European Journal of Cancer Care, 2025, v. 2025, p. 1, doi. 10.1155/ecc/1092518

By:

Kleckner, Amber S.;
Mocci, Evelina;
Clingan, Carin L.;
Youngblood, Shari M.;
Rosenblatt, Paula Y.;
Tkaczuk, Katherine H. R.;
Kleckner, Ian R.;
Dorsey, Susan G.;
Sahgal, Pranshu

Publication type:

Article

Identification of a Risk Allele at SLC41A3 and a Protective Allele HLA-DPB1*02:01 Associated with Sarcopenia in Japanese.

Published in:

Gerontology, 2025, v. 71, n. 5, p. 376, doi. 10.1159/000545298

By:

Furutani, Motoki;
Kimura, Tetsuaki;
Fukunaga, Koya;
Suganuma, Mutsumi;
Takemura, Marie;
Matsui, Yasumoto;
Satake, Shosuke;
Nakano, Yukiko;
Mushiroda, Taisei;
Niida, Shumpei;
Ozaki, Kouichi;
Hosoyama, Tohru;
Shigemizu, Daichi

Publication type:

Article

Building Nucleosome Positioning Maps: Discovering Hidden Gems.

Published in:

WIREs: Computational Molecular Science, 2025, v. 15, n. 3, p. 1, doi. 10.1002/wcms.70029

By:

Masoudi‐Sobhanzadeh, Yosef;
Rahman, Anisur;
Li, Shuxiang;
Bazmi, Saman;
Kumar, Sushant;
Panchenko, Anna R.

Publication type:

Article

Investigating Determinants of Pathogenicity of Carbapenemase–Producing Enterobacterales.

Published in:

2025

By:

Temkin, Elizabeth;
Carmeli, Yehuda

Publication type:

Letter to the Editor

Genomic Epidemiology of Fluoroquinolone-Resistant Strains of Shigella sonnei and Shigella flexneri in the Iberian Peninsula From 2015 to 2022.

Published in:

Journal of Infectious Diseases, 2025, v. 231, n. 5, p. 1176, doi. 10.1093/infdis/jiae596

By:

Jacqueline, Camille;
Minetti, Corrado;
Fernandez, Sara Monzon;
Silveira, Leonor;
Plaza, Isabel Cuesta De La;
Pista, Ângela;
Herrera-Leon, Silvia

Publication type:

Article

Genomic Analysis of Global Mycobacterium abscessus Isolates Reveals Ongoing Evolution of Drug Resistance–Associated Genes.

Published in:

Journal of Infectious Diseases, 2025, v. 231, n. 5, p. 1150, doi. 10.1093/infdis/jiae580

By:

Yang, Tingting;
Beach, Kylie E;
Zhu, Chendi;
Gan, Mingyu;
Wang, Wenli;
Zhou, Hongjuan;
Peng, Lijun;
Wang, Shanshan;
Cai, Long;
Li, Weimin;
Davis, Jordan B;
Cicchetti, Nico;
Slechta, E Susan;
Barker, Adam;
Shakir, Salika M;
Carey, Allison F;
Liu, Qingyun

Publication type:

Article

The added value of metagenomic next-generation sequencing in central nervous system infections: a systematic review of case reports.

Published in:

Infection, 2025, v. 53, n. 3, p. 831, doi. 10.1007/s15010-025-02502-2

By:

Birkeland, Kira Waagner;
Mostert, Laurence;
Claas, Eric C.J.;
Aamot, Hege Vangstein;
Demuyser, Thomas

Publication type:

Article

Targeted next-generation sequencing - a promising approach in the diagnosis of Mycobacterium tuberculosis and drug resistance.

Published in:

Infection, 2025, v. 53, n. 3, p. 967, doi. 10.1007/s15010-024-02411-w

By:

Wu, Xiaocui;
Tan, Guangkun;
Sun, Chunlei;
Wang, Yang;
Yang, Jinghui;
Wu, Chunqiu;
Hu, Chaohui;
Yu, Fangyou

Publication type:

Article

Host-parasite coevolution leads to underwater respiratory adaptations in extreme diving insects, seal lice (Lepidophthirus macrorhini).

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08306-2

By:

Leonardi, María Soledad;
Latorre-Estivalis, Jose M.;
Crespo, José E.;
da Rocha Fernandes, Gabriel;
Schwaha, Thomas;
Blüml, Valentin;
Ebmer, David;
Soto, Florencia A.;
Olivera, Paula;
Lazzari, Claudio R.

Publication type:

Article

The PeachSNP170K array facilitates insights into a large-scale population relatedness and genetic impacts on citrate content and flowering time.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08144-2

By:

Xu, Yaoguang;
Yu, Yang;
Qi, Xinpeng;
Zhang, Qi;
Guan, Jiantao;
Zhang, Zhengquan;
Wei, Jianhua;
Xie, Hua

Publication type:

Article

Isolation and characterization of methicillin-resistant Staphylococcus aureus phage SPB against MRSA planktonic cells and biofilm.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1554182

By:

Ma, Lan;
Liu, Yingyu;
Zheng, Xiaofeng;
Zheng, Baili;
Cheng, Yaling;
Cai, Yuxuan;
Li, Yongchao;
Zhang, Wei

Publication type:

Article

A novel oncogene, leucine-rich repeat protein 1, mediates hypoxia-induced hepatocellular carcinoma progression.

Published in:

Functional & Integrative Genomics, 2025, v. 25, n. 1, p. 1, doi. 10.1007/s10142-025-01626-w

By:

Tao, Li;
Guo, Yixian;
Liu, Runkun;
Lv, Meng;
Wang, Yufeng

Publication type:

Article

Chromosome-level genome assembly and anticoagulant protein annotation of the buffalo leech Hirudinaria bpling (Hirudinea: Hirudinidae).

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11690-y

By:

Khan, Muhammad Salabat;
Müller, Christian;
Zhou, Baozhen

Publication type:

Article

5 个猪种 DKK2 基因结构变异 DKK2-I1-sv89 的多态性研究.

Published in:

Journal of Henan Agricultural Sciences, 2025, v. 54, n. 4, p. 129, doi. 10.15933/j.cnki.1004-3268.2025.04.013

By:

龙菊烟;
卢圣菲;
田姣;
牛熙;
陈霞;
黄世会;
冉雪琴;
王嘉福

Publication type:

Article

Genomic landscape and homologous recombination repair deficiency signature in stage I-III and de novo stage IV primary breast cancers.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf089

By:

Jeon, June E;
Chen, Kuei-Ting;
Madison, Russell;
Schrock, Alexa B;
Sokol, Ethan;
Levy, Mia A;
Rozenblit, Mariya;
Huang, Richard S P;
Pusztai, Lajos

Publication type:

Article

Decoding NATALEE and MonarchE eligibility criteria in a real-world cohort of early breast cancer patients.

Published in:

Oncologist, 2025, v. 30, n. 5, p. 1, doi. 10.1093/oncolo/oyaf061

By:

Canzian, Jacopo;
Gentile, Damiano;
Sanctis, Rita De;
Jacobs, Flavia;
Benvenuti, Chiara;
Gaudio, Mariangela;
Gerosa, Riccardo;
Saltalamacchia, Giuseppe;
Torrisi, Rosalba;
Masci, Giovanna;
Tinterri, Corrado;
Zambelli, Alberto

Publication type:

Article

The active ingredients and mechanism of Zuoqing San in the treatment of sigmoid ulcerative colitis by retention enema.

Published in:

Journal of Complementary & Integrative Medicine, 2025, v. 22, n. 2, p. 343, doi. 10.1515/jcim-2024-0435

By:

Li, Ming;
Deng, Heng;
Xu, Shuqing;
Fang, Xiaoli;
Tang, Kun;
Chen, Li;
Zha, Ansheng

Publication type:

Article

The high-quality telomere-to-telomere genome assembly of the earthworm (Amynthas aspergillum).

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05058-w

By:

Peng, Guangquan;
Qin, Yanghe;
Yan, Zhiming;
He, Mingwei;
Zhao, Yucheng;
Jiang, Neng;
Wei, Changhong

Publication type:

Article

Lingual hamartoma‐like lipoblastoma: the diagnostic value of routine whole‐genome sequencing.

Published in:

Histopathology, 2025, v. 87, n. 1, p. 153, doi. 10.1111/his.15457

By:

Kan, Sheng‐Yuan;
Ferro, Ashley;
Watkins, James A;
Behjati, Sam;
Murray, Matthew J;
Coleman, Nicholas;
Roberts, Thomas;
Cross, Justin;
Trotman, Jamie;
Tarpey, Patrick;
Hook, C Elizabeth;
Cameron, Malcolm;
Tadross, John A.

Publication type:

Article

First genomic analysis of a Clostridium perfringens strain carrying both the cpe and netB genes and the proposal of an amended toxin-based typing scheme.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1580271

By:

Mada, Takashi;
Ochi, Kenta;
Okamoto, Mariko;
Takamatsu, Daisuke

Publication type:

Article

From farm effluent to biotechnological potential: pGLS, a novel and resilient temperate bacteriophage with synergistic activity and broad antibiofilm properties against Staphylococcus and Mammaliicoccus.

Published in:

Journal of Applied Microbiology, 2025, v. 136, n. 5, p. 1, doi. 10.1093/jambio/lxaf118

By:

Viana, Vitor Emanuel Lanes;
Ahmad, Faizan;
Martuchelle, Samuel Sathler;
Estanislau, Sandy de Almada;
Rasheed, Nohman;
Laport, Marinella Silva;
Pereira, Monalessa Fábia;
Giambiagi-deMarval, Marcia;
Rossi, Ciro César

Publication type:

Article

Calendula officinalis extract enhances wound healing by promoting fibroblast activity and reducing inflammation in mice.

Published in:

Cutaneous & Ocular Toxicology, 2025, v. 44, n. 2, p. 161, doi. 10.1080/15569527.2025.2485129

By:

Ozturan, Yalcin Alper;
Akin, Ibrahim

Publication type:

Article

Blastn2dotplots: multiple dot-plot visualizer for genome comparisons.

Published in:

BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06175-4

By:

Okuno, Miki;
Yamamoto, Takeshi;
Ogura, Yoshitoshi

Publication type:

Article

Six Newly Sequenced Chloroplast Genomes From Quadriflagellate Chlamydomonadales (Chlorophyceae): Phylogeny and Comparative Genome Analyses Open Access.

Published in:

Genome Biology & Evolution, 2025, v. 17, n. 5, p. 1, doi. 10.1093/gbe/evaf074

By:

Chen, Yangliang;
Xiong, Qian;
Dai, Qingyu;
Liu, Guoxiang

Publication type:

Article

Whole Genome Duplication in the Genomics Era: The Hidden Gems in Invertebrates? Open Access.

Published in:

Genome Biology & Evolution, 2025, v. 17, n. 5, p. 1, doi. 10.1093/gbe/evaf073

By:

Au, Hing Man;
Nong, Wenyan;
Hui, Jerome Ho Lam

Publication type:

Article