Works matching DE "MICROBIAL genes"

Results: 613

Dietary fiber content in clinical ketogenic diets modifies the gut microbiome and seizure resistance in mice.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56091-7

By:

Özcan, Ezgi;
Yu, Kristie B.;
Dinh, Lyna;
Lum, Gregory R.;
Lau, Katie;
Hsu, Jessie;
Arino, Mariana;
Paramo, Jorge;
Lopez-Romero, Arlene;
Hsiao, Elaine Y.

Publication type:

Article

Click chemistry と HCR-FISH 法を組み合わせた機能遺伝子の視覚的検出技術の開発.

Published in:

Japanese Journal of JSCE / Doboku Gakkai Ronbunshu, 2024, v. 80, n. 25, p. 1

By:

永妻志問;
幡本将史;
山口隆司;
山口剛士

Publication type:

Article

DHS リアクターと ichip 法を用いたバイオセメンテーションに有効な尿素分解菌の培養.

Published in:

Japanese Journal of JSCE / Doboku Gakkai Ronbunshu, 2024, v. 80, n. 25, p. 1

By:

飯野愛未;
藤原莉久;
武邊勝道;
山田光陽;
幡本将史;
山口隆司;
山口剛士

Publication type:

Article

Microbial and Functional Gene Dynamics in Long-Term Fermented Mariculture Sediment.

Published in:

Journal of Marine Science & Engineering, 2025, v. 13, n. 5, p. 975, doi. 10.3390/jmse13050975

By:

Zhang, Guochao;
Luo, Mengyuan;
Xu, Cuilian;
Pan, Xinru;
Yi, Guoqiang;
Xiao, Wei;
Wang, Chenghao;
Zhao, Zhen;
Li, Ruilong

Publication type:

Article

Effects of Human Activities on Antibiotic Resistance Genes and Microbial Diversity in Lake Sediments.

Published in:

Water (20734441), 2025, v. 17, n. 10, p. 1523, doi. 10.3390/w17101523

By:

Wang, Rui;
Li, Min;
Li, Haiying;
Yin, Xianyu;
Zhang, Hanlu;
Wang, Hongmei;
Ding, Chengshi;
Chen, Qing

Publication type:

Article

The influence of Chinese tallow (Triadica sebifera) leaf litter on water quality and microbial community composition.

Published in:

Aquatic Ecology, 2021, v. 55, n. 1, p. 265, doi. 10.1007/s10452-020-09828-z

By:

Montez, Raymond D.;
Saenz, Daniel;
Martynova-Van Kley, Alexandra;
Van Kley, James;
Nalian, Armen;
Farrish, Kenneth

Publication type:

Article

Deciphering pH-dependent microbial taxa and functional gene co-occurrence in the coral Galaxea fascicularis.

Published in:

Microbial Ecology, 2023, v. 86, n. 3, p. 1856, doi. 10.1007/s00248-023-02183-0

By:

Lin, Zhenyue;
Zheng, Xinqing;
Chen, Jianming

Publication type:

Article

Mechanisms Driving the Distribution and Activity of Mineralization and Nitrification in the Reservoir Riparian Zone.

Published in:

Microbial Ecology, 2023, v. 86, n. 3, p. 1829, doi. 10.1007/s00248-023-02180-3

By:

Li, Tingting;
Wang, Xiaoyan;
Wang, Xia;
Huang, Jingyu;
Shen, Lei

Publication type:

Article

Diversity of Microbial Functional Genes Should Be Considered During the Interpretation of the qPCR Melting Curves.

Published in:

Microbial Ecology, 2022, v. 84, n. 3, p. 935, doi. 10.1007/s00248-021-01883-9

By:

Almendras, Katerin;
Iannuzzi, Stefania;
Carú, Margarita;
Orlando, Julieta

Publication type:

Article

The Diversity of Nitrogen-Cycling Microbial Genes in a Waste Stabilization Pond Reveals Changes over Space and Time that Is Uncoupled to Changing Nitrogen Chemistry.

Published in:

Microbial Ecology, 2021, v. 81, n. 4, p. 1029, doi. 10.1007/s00248-020-01639-x

By:

Rose, A.;
Padovan, A.;
Christian, K.;
van de Kamp, J.;
Kaestli, M.;
Tsoukalis, S.;
Bodrossy, L.;
Gibb, K.

Publication type:

Article

Analysis of Extensive [FeFe] Hydrogenase Gene Diversity Within the Gut Microbiota of Insects Representing Five Families of Dictyoptera.

Published in:

Microbial Ecology, 2012, v. 63, n. 3, p. 586, doi. 10.1007/s00248-011-9941-5

By:

Ballor, Nicholas;
Leadbetter, Jared

Publication type:

Article

基于16S rRNA高通量测序技术分析梅花鹿瘤胃微生物多样性和功能预测的研究.

Published in:

Feed Research, 2025, v. 48, n. 5, p. 102, doi. 10.13557/j.cnki.issn1002-2813.2025.05.018

By:

曲磊;
关诗宇;
谷兴亮;
秦立红

Publication type:

Article

Bovine host genome acts on rumen microbiome function linked to methane emissions.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03293-0

By:

Martínez-Álvaro, Marina;
Auffret, Marc D.;
Duthie, Carol-Anne;
Dewhurst, Richard J.;
Cleveland, Matthew A.;
Watson, Mick;
Roehe, Rainer

Publication type:

Article

Comprehensive functional core microbiome comparison in genetically obese and lean hosts under the same environment.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02784-w

By:

Martínez-Álvaro, Marina;
Zubiri-Gaitán, Agostina;
Hernández, Pilar;
Greenacre, Michael;
Ferrer, Alberto;
Blasco, Agustín

Publication type:

Article

PATHOGEN DETECTION USING THE DPCR MICROBIAL DNA DETECTION ASSAYS ON THE QIACUITY.

Published in:

Genetics & Applications, 2023, p. 18

By:

Kamil, Matulka

Publication type:

Article

Shotgun Metagenomic Sequencing of Extremophilic Community from Soda Lake, Ga’ar Lake, in Wadi Al-Natrun, Egypt.

Published in:

Egyptian Journal of Experimental Biology (Botany), 2021, v. 17, n. 1, p. 21, doi. 10.5455/egyjebb.20210309063625

By:

Hagagy, Nashwa I.;
Elshafi, Naglaa F.;
Selim, Samy A.;
Hamedo, Hend A.

Publication type:

Article

Enhancing the Anaerobic Biodegradation of Petroleum Hydrocarbons in Soils with Electrically Conductive Materials.

Published in:

Bioengineering (Basel), 2023, v. 10, n. 4, p. 441, doi. 10.3390/bioengineering10040441

By:

Cruz Viggi, Carolina;
Tucci, Matteo;
Resitano, Marco;
Palushi, Valentina;
Crognale, Simona;
Matturro, Bruna;
Petrangeli Papini, Marco;
Rossetti, Simona;
Aulenta, Federico

Publication type:

Article

β-Ionone: Its Occurrence and Biological Function and Metabolic Engineering.

Published in:

Plants (2223-7747), 2021, v. 10, n. 4, p. 754, doi. 10.3390/plants10040754

By:

Paparella, Antonello;
Shaltiel-Harpaza, Liora;
Ibdah, Mwafaq

Publication type:

Article

MIGRENE: The Toolbox for Microbial and Individualized GEMs, Reactobiome and Community Network Modelling.

Published in:

Metabolites (2218-1989), 2024, v. 14, n. 3, p. 132, doi. 10.3390/metabo14030132

By:

Bidkhori, Gholamreza;
Shoaie, Saeed

Publication type:

Article

The Importance of Objective Stool Classification in Fecal 1H-NMR Metabolomics: Exponential Increase in Stool Crosslinking Is Mirrored in Systemic Inflammation and Associated to Fecal Acetate and Methionine.

Published in:

Metabolites (2218-1989), 2021, v. 11, n. 3, p. 172, doi. 10.3390/metabo11030172

By:

Deutsch, Leon;
Stres, Blaz;
Cordaro, Marika;
Siracusa, Rosalba

Publication type:

Article

Gut Microbial Composition and Antibiotic Resistance Profiles in Dairy Calves with Diarrhea.

Published in:

Life (2075-1729), 2025, v. 15, n. 1, p. 10, doi. 10.3390/life15010010

By:

Zhang, Lu;
Bai, Jun;
Guo, Qian;
Li, Long;
Jia, Yanqing;
Qiu, Xinxin;
Zhou, Dong;
Zhang, Zhencang;
Niu, Huafeng

Publication type:

Article

Biochar Enhances Soil Resource Availability and Suppresses Microbial Metabolism Genes in the Rhizosphere of Wheat.

Published in:

Life (2075-1729), 2023, v. 13, n. 9, p. 1843, doi. 10.3390/life13091843

By:

Gong, Xin;
Li, Sixian;
Wu, Zelu;
Alhaj Hamoud, Yousef;
Shaghaleh, Hiba;
Kalkhajeh, Yusef Kianpoor;
Si, Chenxiao;
Zhu, Lin;
Ma, Chao

Publication type:

Article

N Addition Overwhelmed the Effects of P Addition on the Soil C, N, and P Cycling Genes in Alpine Meadow of the Qinghai-Tibetan Plateau.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.860590

By:

Xiao, Jiannan;
Dong, Shikui;
Shen, Hao;
Li, Shuai;
Wessell, Kelly;
Liu, Shiliang;
Li, Wei;
Zhi, Yangliu;
Mu, Zhiyuan;
Li, Hongbo

Publication type:

Article

Unraveling potential enzymes and their functional role in fine cocoa beans fermentation using temporal shotgun metagenomics.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.994524

By:

Lima, Carolina O. de C.;
De Castro, Giovanni M.;
Solar, Ricardo;
Vaz, Aline B. M.;
Lobo, Francisco;
Pereira, Gilberto;
Rodrigues, Cristine;
Vandenberghe, Luciana;
Martins Pinto, Luiz Roberto;
Miura da Costa, Andréa;
Bello Koblitz, Maria Gabriela;
Guimarães Benevides, Raquel;
Azevedo, Vasco;
Trovatti Uetanabaro, Ana Paula;
Ricardo Soccol, Carlos;
Góes-Neto, Aristóteles

Publication type:

Article

AadA36, a novel chromosomal aminoglycoside nucleotidyltransferase from a clinical isolate of Providencia stuartii.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1035651

By:

Mengdi Gao;
Chunlin Feng;
Yongan Ji;
Yaokai Shi;
Weina Shi;
Lei Zhang;
Shuang Liu;
Anqi Li;
Xueya Zhang;
Qiaoling Li;
Junwan Lu;
Qiyu Bao;
Hailin Zhang

Publication type:

Article

Change in composition and potential functional genes of microbial communities on carbonatite rinds with different weathering times.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1024672

By:

Jin Chen;
Fangbing Li;
Xiangwei Zhao;
Yang Wang;
Limin Zhang;
Lingbin Yan;
Lifei Yu

Publication type:

Article

Long-term mercury contamination does not affect the microbial gene potential for C and N cycling in soils but enhances detoxification gene abundance.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1034138

By:

Frey, Beat;
Rast, Basil M.;
Weihong Qi;
Stierli, Beat;
Brunner, Ivano

Publication type:

Article

Effects of high concentrate rations on ruminal fermentation and microbiota of yaks.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 01, doi. 10.3389/fmicb.2022.957152

By:

Kaiyue Pang;
Dongwen Dai;
Yingkui Yang;
Xun Wang;
Shujie Liu;
Weihua Huang;
Bin Xue;
Shatuo Chai;
ShuXiang Wang

Publication type:

Article

Precision targeting of food biofilm-forming genes by microbial scissors: CRISPR-Cas as an effective modulator.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.964848

By:

Ghosh, Sreejita;
Lahiri, Dibyajit;
Nag, Moupriya;
Sarkar, Tanmay;
Pati, Siddhartha;
Edinur, Hisham Atan;
Kumar, Manoj;
Mohd Zain, Muhammad R. A.;
Ray, Rina Rani

Publication type:

Article

An amateur gut microbial configuration formed in giant panda for striving to digest cellulose in bamboo: Systematic evidence from intestinal digestive enzymes, functional genes and microbial structures.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 01, doi. 10.3389/fmicb.2022.926515

By:

Mingye Zhan;
Aishan Wang;
Yong Yao;
Yingmin Zhou;
Shu Zhang;
Xiaohua Fu;
Jun Zhou;
Enle Pei;
Lei Wang

Publication type:

Article

Spatial Patterns and Composition Traits of Soil Microbial Nitrogen-Metabolism Genes in the Robinia pseudoacacia Forests at a Regional Scale.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.918134

By:

Ku, Yongli;
Lei, Yuting;
Han, Xiaoting;
Peng, Jieying;
Zhu, Ying;
Zhao, Zhong

Publication type:

Article

Fungi and Archaea Control Soil N<sub>2</sub>O Production Potential in Chinese Grasslands Rather Than Bacteria.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.844663

By:

Zhong, Lei;
Qing, Jinwu;
Liu, Min;
Cai, Xiaoxian;
Li, Gaoyuan;
Li, Frank yonghong;
Chen, Guanyi;
Xu, Xingliang;
Xue, Kai;
Wang, Yanfen

Publication type:

Article

Diet and Host Genetics Drive the Bacterial and Fungal Intestinal Metatranscriptome of Gilthead Sea Bream.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.883738

By:

Naya-Català, Fernando;
Piazzon, M. Carla;
Calduch-Giner, Josep A.;
Sitjà-Bobadilla, Ariadna;
Pérez-Sánchez, Jaume

Publication type:

Article

Characterizing Natural Organic Matter Transformations by Microbial Communities in Terrestrial Subsurface Ecosystems: A Critical Review of Analytical Techniques and Challenges.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.864895

By:

Cabugao, Kristine Grace M.;
Gushgari-Doyle, Sara;
Chacon, Stephany S.;
Wu, Xiaoqin;
Bhattacharyya, Amrita;
Bouskill, Nicholas;
Chakraborty, Romy

Publication type:

Article

Metabolic Alternations During Gestation in Dezhou Donkeys and the Link to the Gut Microbiota.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.801976

By:

Li, Yan;
Ma, Qingshan;
Liu, Guiqin;
Zhang, Zhenwei;
Zhan, Yandong;
Zhu, Mingxia;
Wang, Changfa

Publication type:

Article

Multi-Omics Association Reveals the Effects of Intestinal Microbiome–Host Interactions on Fat Deposition in Broilers.

Published in:

Frontiers in Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fmicb.2021.815538

By:

Jing, Yang;
Yuan, Yuqi;
Monson, Melissa;
Wang, Peng;
Mu, Fang;
Zhang, Qi;
Na, Wei;
Zhang, Ke;
Wang, Yuxiang;
Leng, Li;
Li, Yumao;
Luan, Peng;
Wang, Ning;
Guo, Rongjun;
Lamont, Susan J.;
Li, Hui;
Yuan, Hui

Publication type:

Article

Regulatory Effects of Combined Dietary Supplementation With Essential Oils and Organic Acids on Microbial Communities of Cobb Broilers.

Published in:

Frontiers in Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fmicb.2021.814626

By:

Qiao, Jiayun;
Shang, Zhiyuan;
Liu, Xuejiao;
Wang, Kewei;
Wu, Zhiwei;
Wei, Qing;
Li, Haihua

Publication type:

Article

Advances in Metagenomics and Its Application in Environmental Microorganisms.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.766364

By:

Zhang, Lu;
Chen, FengXin;
Zeng, Zhan;
Xu, Mengjiao;
Sun, Fangfang;
Yang, Liu;
Bi, Xiaoyue;
Lin, Yanjie;
Gao, YuanJiao;
Hao, HongXiao;
Yi, Wei;
Li, Minghui;
Xie, Yao

Publication type:

Article

Taxonomy and Functional Diversity in the Fecal Microbiome of Beef Cattle Reared in Brazilian Traditional and Semi-Intensive Production Systems.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.768480

By:

Corrêa, Patricia Spoto;
Jimenez, Carolina Rodriguez;
Mendes, Lucas William;
Rymer, Caroline;
Ray, Partha;
Gerdes, Luciana;
da Silva, Vagner Ovani;
De Nadai Fernandes, Elisabete Aparecida;
Abdalla, Adibe Luiz;
Louvandini, Helder

Publication type:

Article

Metagenomic Analysis Reveals New Microbiota Related to Fiber Digestion in Pigs.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.746717

By:

Liu, Gensheng;
Li, Pinghua;
Hou, Liming;
Niu, Qing;
Pu, Guang;
Wang, Binbin;
Du, Taoran;
Kim, Sung Woo;
Niu, Peipei;
Li, Qiang;
Huang, Ruihua

Publication type:

Article

Niche Differentiation of Arsenic-Transforming Microbial Groups in the Rice Rhizosphere Compartments as Impacted by Water Management and Soil-Arsenic Concentrations.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.736751

By:

Somenahally, Anil C.;
Loeppert, Richard H.;
Zhou, Jizhong;
Gentry, Terry J.

Publication type:

Article

Drought Stress Triggers Shifts in the Root Microbial Community and Alters Functional Categories in the Microbial Gene Pool.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.744897

By:

Xie, Jianbo;
Dawwam, Ghada E.;
Sehim, Amira E.;
Li, Xian;
Wu, Jiadong;
Chen, Sisi;
Zhang, Deqiang

Publication type:

Article

Microbiome of diseased and healthy implants—a comprehensive microbial data analysis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2024.1445751

By:

Pingyi Jia;
Xinran Guo;
Jinchen Ye;
Hongye Lu;
Jingwen Yang;
Jianxia Hou

Publication type:

Article

Ecological Restoration Project's Contribution to Improving the Water Quality of Reclaimed Water Replenishing Urban Rivers.

Published in:

Polish Journal of Environmental Studies, 2024, v. 33, n. 6, p. 6069, doi. 10.15244/pjoes/184149

By:

Fan Cheng;
Xianbo Zhong;
Yumeng Wang;
Naicheng Wu;
Shuai Zhi;
Juncheng Han;
Kan Wang;
Xiao Wang

Publication type:

Article

Natural variation in root exudation of GABA and DIMBOA impacts the maize root endosphere and rhizosphere microbiomes.

Published in:

Journal of Experimental Botany, 2022, v. 73, n. 14, p. 5052, doi. 10.1093/jxb/erac202

By:

Wang, Peng;
Lopes, Lucas Dantas;
Lopez-Guerrero, Martha G;
Dijk, Karin van;
Alvarez, Sophie;
Riethoven, Jean-Jack;
Schachtman, Daniel P

Publication type:

Article

Methodological Considerations in Longitudinal Analyses of Microbiome Data: A Comprehensive Review.

Published in:

Genes, 2024, v. 15, n. 1, p. 51, doi. 10.3390/genes15010051

By:

Lyu, Ruiqi;
Qu, Yixiang;
Divaris, Kimon;
Wu, Di

Publication type:

Article

Detection of Genes Encoding Microbial Surface Component Recognizing Adhesive Matrix Molecules in Methicillin-Resistant Staphylococcus aureus Isolated from Pyoderma Patients.

Published in:

Genes, 2023, v. 14, n. 4, p. 783, doi. 10.3390/genes14040783

By:

Alorabi, Mohammed;
Ejaz, Uroosa;
Khoso, Bahram Khan;
Uddin, Fakhur;
Mahmoud, Samy F.;
Sohail, Muhammad;
Youssef, Mona

Publication type:

Article

MicrobiomeGWAS: A Tool for Identifying Host Genetic Variants Associated with Microbiome Composition.

Published in:

Genes, 2022, v. 13, n. 7, p. 1224, doi. 10.3390/genes13071224

By:

Hua, Xing;
Song, Lei;
Yu, Guoqin;
Vogtmann, Emily;
Goedert, James J.;
Abnet, Christian C.;
Landi, Maria Teresa;
Shi, Jianxin

Publication type:

Article

Successful Silencing of the Mycotoxin Synthesis Gene TRI5 in Fusarium culmorum and Observation of Reduced Virulence in VIGS and SIGS Experiments.

Published in:

Genes, 2022, v. 13, n. 3, p. 395, doi. 10.3390/genes13030395

By:

Tretiakova, Polina;
Voegele, Ralf Thomas;
Soloviev, Alexander;
Link, Tobias Immanuel

Publication type:

Article

Microbial Genes for a Circular and Sustainable Bio-PET Economy.

Published in:

Genes, 2019, v. 10, n. 5, p. 373, doi. 10.3390/genes10050373

By:

Salvador, Manuel;
Abdulmutalib, Umar;
Gonzalez, Jaime;
Kim, Juhyun;
Smith, Alex A.;
Faulon, Jean-Loup;
Wei, Ren;
Zimmermann, Wolfgang;
Jimenez, Jose I.

Publication type:

Article