Works matching Shotgun sequencing

Results: 3211
    1

    Gut microbiome dynamics and predictive value in hospitalized COVID-19 patients: a comparative analysis of shallow and deep shotgun sequencing.

    Published in:
    Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1342749
    By:
    • Kopera, Katarzyna;
    • Gromowski, Tomasz;
    • Wydmański, Witold;
    • Skonieczna-Żydecka, Karolina;
    • Muszyńska, Agata;
    • Zielińska, Kinga;
    • Wierzbicka-Woś, Anna;
    • Kaczmarczyk, Mariusz;
    • Kadaj-Lipka, Roland;
    • Cembrowska-Lech, Danuta;
    • Januszkiewicz, Kornelia;
    • Kotfis, Katarzyna;
    • Witkiewicz, Wojciech;
    • Nalewajska, Magdalena;
    • Feret, Wiktoria;
    • Marlicz, Wojciech;
    • Łoniewski, Igor;
    • Łabaj, Paweł P.;
    • Rydzewska, Grażyna;
    • Kosciolek, Tomasz
    Publication type:
    Article
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    Correlation between Targeted qPCR Assays and Untargeted DNA Shotgun Metagenomic Sequencing for Assessing the Fecal Microbiota in Dogs.

    Published in:
    Animals (2076-2615), 2023, v. 13, n. 16, p. 2597, doi. 10.3390/ani13162597
    By:
    • Sung, Chi-Hsuan;
    • Pilla, Rachel;
    • Chen, Chih-Chun;
    • Ishii, Patricia Eri;
    • Toresson, Linda;
    • Allenspach-Jorn, Karin;
    • Jergens, Albert E.;
    • Summers, Stacie;
    • Swanson, Kelly S.;
    • Volk, Holger;
    • Schmidt, Teresa;
    • Stuebing, Helene;
    • Rieder, Johanna;
    • Busch, Kathrin;
    • Werner, Melanie;
    • Lisjak, Anja;
    • Gaschen, Frederic P.;
    • Belchik, Sara E.;
    • Tolbert, M. Katherine;
    • Lidbury, Jonathan A.
    Publication type:
    Article
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    Comparison between 16S rRNA and shotgun sequencing in colorectal cancer, advanced colorectal lesions, and healthy human gut microbiota.

    Published in:
    BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10621-7
    By:
    • Bars-Cortina, David;
    • Ramon, Elies;
    • Rius-Sansalvador, Blanca;
    • Guinó, Elisabet;
    • Garcia-Serrano, Ainhoa;
    • Mach, Núria;
    • Khannous-Lleiffe, Olfat;
    • Saus, Ester;
    • Gabaldón, Toni;
    • Ibáñez-Sanz, Gemma;
    • Rodríguez-Alonso, Lorena;
    • Mata, Alfredo;
    • García-Rodríguez, Ana;
    • Obón-Santacana, Mireia;
    • Moreno, Victor
    Publication type:
    Article
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    Shotgun sequencing of the faecal microbiome to predict response to steroids in patients with lower gastrointestinal acute graft‐versus‐host disease: An exploratory analysis.

    Published in:
    British Journal of Haematology, 2021, v. 192, n. 3, p. e69, doi. 10.1111/bjh.17238
    By:
    • Turner, Gavin;
    • Smith, Madeline;
    • Hoeschen, Andrea L.;
    • Wilson, Jessica A.;
    • Kennedy, Jessica;
    • Abramson, Max;
    • Cao, Qing;
    • El Jurdi, Najla;
    • MacMillan, Margaret L.;
    • Weisdorf, Daniel J.;
    • Blazar, Bruce R.;
    • Khoruts, Alexander;
    • Shields‐Cutler, Robin R.;
    • Knights, Dan;
    • Holtan, Shernan G.;
    • Rashidi, Armin
    Publication type:
    Article
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    Metagenomic shotgun sequencing of blood to identify bacteria and viruses in leukemic febrile neutropenia.

    Published in:
    PLoS ONE, 2022, v. 17, n. 6, p. 1, doi. 10.1371/journal.pone.0269405
    By:
    • Vijayvargiya, Prakhar;
    • Feri, Adeline;
    • Mairey, Mathilde;
    • Rouillon, Cécile;
    • Jeraldo, Patricio R.;
    • Esquer Garrigos, Zerelda;
    • Thoendel, Matthew J.;
    • Greenwood-Quaintance, Kerryl E.;
    • Sohail, M. Rizwan;
    • Sampathkumar, Priya;
    • Spychalla, Megan T.;
    • Stewart, A. K.;
    • Patnaik, Mrinal M.;
    • Tande, Aaron J.;
    • Cruveiller, Stéphane;
    • Hannet, Irene;
    • Beurdeley, Pascale;
    • Patel, Robin
    Publication type:
    Article
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    Meta-analysis of shotgun sequencing of gut microbiota in Parkinson's disease.

    Published in:
    NPJ Parkinson's Disease, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41531-024-00724-z
    By:
    • Nishiwaki, Hiroshi;
    • Ueyama, Jun;
    • Ito, Mikako;
    • Hamaguchi, Tomonari;
    • Takimoto, Keiichi;
    • Maeda, Tetsuya;
    • Kashihara, Kenichi;
    • Tsuboi, Yoshio;
    • Mori, Hiroshi;
    • Kurokawa, Ken;
    • Katsuno, Masahisa;
    • Hirayama, Masaaki;
    • Ohno, Kinji
    Publication type:
    Article
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