Works matching DE "CHROMATIN"

Results: 5000

Dissecting the Emerging Regulatory and Mechanistic Paradigms of Transcribed Conserved Non-Coding Elements in Breast Cancer.

Published in:

Biomolecules (2218-273X), 2025, v. 15, n. 5, p. 627, doi. 10.3390/biom15050627

By:

Zhu, Wenyong;
Huang, Hao;
Li, Qiong;
Gu, Yu;
Zhang, Rongxin;
Shu, Huiling;
Zhao, Yunqi;
Liu, Hongde;
Sun, Xiao

Publication type:

Article

The COPII Transport Complex Participates in HPV16 Infection.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 5, p. 616, doi. 10.3390/v17050616

By:

Day, Patricia M.;
Thompson, Cynthia D.;
Weisberg, Andrea S.;
Schiller, John T.

Publication type:

Article

NDF/GLYR1 Promotes RNA Polymerase II Processivity via Pol II Binding and Nucleosome Destabilization.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4874, doi. 10.3390/ijms26104874

By:

Li, Ziwei;
Fei, Jia

Publication type:

Article

DDM1 Maintains Heterochromatin by Regulating Histone Variants.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4845, doi. 10.3390/ijms26104845

By:

Sun, Yuanyi;
Xie, Qijun;
Chu, Huaixue;
Lv, Bin;
Xie, Linan;
Zhang, Qingzhu

Publication type:

Article

Modeling the Copy Number of HSATII Repeats in Human Pericentromere.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4751, doi. 10.3390/ijms26104751

By:

Ghimire, Puranjan;
Joh, Richard I.

Publication type:

Article

ARID1A and Its Impact Across the Hallmarks of Cancer.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4644, doi. 10.3390/ijms26104644

By:

Kearns, Bridger;
McKell, Andralyn;
Steveson, Isaac;
Worley, Peyton;
Barton, Braeden;
Bennett, Jordan;
Anderson, DeLaney;
Harris, Jacob;
Christensen, James;
Barrott, Jared J.

Publication type:

Article

Cutaneous T-Cell Lymphoma: Molecular and Cytogenetic Findings.

Published in:

Oncology (08909091), 2007, v. 21, p. 13

By:

Sterry, Wolfram

Publication type:

Article

Rif1 binds to G quadruplexes and suppresses replication over long distances.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 11, p. 889, doi. 10.1038/nsmb.3102

By:

Kanoh, Yutaka;
Matsumoto, Seiji;
Fukatsu, Rino;
Kakusho, Naoko;
Kono, Nobuaki;
Renard-Guillet, Claire;
Masuda, Koji;
Iida, Keisuke;
Nagasawa, Kazuo;
Shirahige, Katsuhiko;
Masai, Hisao

Publication type:

Article

Want reprogramming? Cut back on the chromatin assembly!

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 9, p. 648, doi. 10.1038/nsmb.3081

By:

Kaufman, Paul D

Publication type:

Article

An ancient protein-DNA interaction underlying metazoan sex determination.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 6, p. 442, doi. 10.1038/nsmb.3032

By:

Murphy, Mark W;
Lee, John K;
Rojo, Sandra;
Gearhart, Micah D;
Kurahashi, Kayo;
Banerjee, Surajit;
Loeuille, Guy-André;
Bashamboo, Anu;
McElreavey, Kenneth;
Zarkower, David;
Aihara, Hideki;
Bardwell, Vivian J

Publication type:

Article

A lncRNA regulates alternative splicing via establishment of a splicing-specific chromatin signature.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 5, p. 370, doi. 10.1038/nsmb.3005

By:

Gonzalez, Inma;
Munita, Roberto;
Agirre, Eneritz;
Dittmer, Travis A;
Gysling, Katia;
Misteli, Tom;
Luco, Reini F

Publication type:

Article

A bumpy road for RNA polymerase II.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 5, p. 353, doi. 10.1038/nsmb.3020

By:

Giono, Luciana E;
Kornblihtt, Alberto R

Publication type:

Article

NAD<sup>+</sup>-SIRT1 control of H3K4 trimethylation through circadian deacetylation of MLL1.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 4, p. 312, doi. 10.1038/nsmb.2990

By:

Aguilar-Arnal, Lorena;
Katada, Sayako;
Orozco-Solis, Ricardo;
Sassone-Corsi, Paolo

Publication type:

Article

MacroH2A1.1 and PARP-1 cooperate to regulate transcription by promoting CBP-mediated H2B acetylation.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 11, p. 981, doi. 10.1038/nsmb.2903

By:

Chen, Hongshan;
Ruiz, Penelope D;
Novikov, Leonid;
Casill, Alyssa D;
Park, Jong Woo;
Gamble, Matthew J

Publication type:

Article

BRD4 assists elongation of both coding and enhancer RNAs by interacting with acetylated histones.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 12, p. 1047, doi. 10.1038/nsmb.2912

By:

Kanno, Tomohiko;
Kanno, Yuka;
LeRoy, Gary;
Campos, Eric;
Sun, Hong-Wei;
Brooks, Stephen R;
Vahedi, Golnaz;
Heightman, Tom D;
Garcia, Benjamin A;
Reinberg, Danny;
Siebenlist, Ulrich;
O'Shea, John J;
Ozato, Keiko

Publication type:

Article

The timing is right.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 10, p. 846, doi. 10.1038/nsmb.2898

By:

Friis, R Magnus N;
Schultz, Michael C

Publication type:

Article

High-temporal-resolution view of transcription and chromatin states across distinct metabolic states in budding yeast.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 10, p. 854, doi. 10.1038/nsmb.2881

By:

Kuang, Zheng;
Cai, Ling;
Zhang, Xuekui;
Ji, Hongkai;
Tu, Benjamin P;
Boeke, Jef D

Publication type:

Article

NuRD-ZNF827 recruitment to telomeres creates a molecular scaffold for homologous recombination.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 9, p. 760, doi. 10.1038/nsmb.2877

By:

Conomos, Dimitri;
Reddel, Roger R;
Pickett, Hilda A

Publication type:

Article

RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 8, p. 686, doi. 10.1038/nsmb.2853

By:

Ni, Zuyao;
Xu, Chao;
Guo, Xinghua;
Hunter, Gerald O;
Kuznetsova, Olga V;
Tempel, Wolfram;
Marcon, Edyta;
Zhong, Guoqing;
Guo, Hongbo;
Kuo, Wei-Hung William;
Li, Joyce;
Young, Peter;
Olsen, Jonathan B;
Wan, Cuihong;
Loppnau, Peter;
El Bakkouri, Majida;
Senisterra, Guillermo A;
He, Hao;
Huang, Haiming;
Sidhu, Sachdev S

Publication type:

Article

Nucleosomal regulation of chromatin composition and nuclear assembly revealed by histone depletion.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 617, doi. 10.1038/nsmb.2845

By:

Zierhut, Christian;
Jenness, Christopher;
Kimura, Hiroshi;
Funabiki, Hironori

Publication type:

Article

Revolution in the Polycomb hierarchy.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 573, doi. 10.1038/nsmb.2848

By:

Comet, Itys;
Helin, Kristian

Publication type:

Article

Nucleosome assembly is required for nuclear pore complex assembly in mouse zygotes.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 609, doi. 10.1038/nsmb.2839

By:

Inoue, Azusa;
Zhang, Yi

Publication type:

Article

Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 6, p. 569, doi. 10.1038/nsmb.2833

By:

Kalb, Reinhard;
Latwiel, Sebastian;
Baymaz, H Irem;
Jansen, Pascal W T C;
Müller, Christoph W;
Vermeulen, Michiel;
Müller, Jürg

Publication type:

Article

Transcription-generated torsional stress destabilizes nucleosomes.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 88, doi. 10.1038/nsmb.2723

By:

Teves, Sheila S;
Henikoff, Steven

Publication type:

Article

Centromeric histone H2B monoubiquitination promotes noncoding transcription and chromatin integrity.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 3, p. 236, doi. 10.1038/nsmb.2776

By:

Sadeghi, Laia;
Siggens, Lee;
Svensson, J Peter;
Ekwall, Karl

Publication type:

Article

Chromatin remodeling: a collaborative effort.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 14, doi. 10.1038/nsmb.2748

By:

Varga-Weisz, Patrick D

Publication type:

Article

Temporal orchestration of repressive chromatin modifiers by circadian clock Period complexes.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 2, p. 126, doi. 10.1038/nsmb.2746

By:

Duong, Hao A;
Weitz, Charles J

Publication type:

Article

CENP-A octamers do not confer a reduction in nucleosome height by AFM.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 4, doi. 10.1038/nsmb.2743

By:

Codomo, Christine A;
Furuyama, Takehito;
Henikoff, Steven

Publication type:

Article

Dynamics of yeast histone H2A and H2B phosphorylation in response to a double-strand break.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 103, doi. 10.1038/nsmb.2737

By:

Lee, Cheng-Sheng;
Lee, Kihoon;
Legube, Gaëlle;
Haber, James E

Publication type:

Article

Centromere chromatin: a loose grip on the nucleosome?

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 8, doi. 10.1038/nsmb.2745

By:

Lyubchenko, Yuri L

Publication type:

Article

CENP-A octamers do not confer a reduction in nucleosome height by AFM.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 2, doi. 10.1038/nsmb.2742

By:

Walkiewicz, Marcin P;
Dimitriadis, Emilios K;
Dalal, Yamini

Publication type:

Article

Reply to 'CENP-A octamers do not confer a reduction in nucleosome height by AFM'.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 5, doi. 10.1038/nsmb.2744

By:

Miell, Matthew D D;
Straight, Aaron F;
Allshire, Robin C

Publication type:

Article

Overlapping chromatin-remodeling systems collaborate genome wide at dynamic chromatin transitions.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 73, doi. 10.1038/nsmb.2718

By:

Morris, Stephanie A;
Baek, Songjoon;
Sung, Myong-Hee;
John, Sam;
Wiench, Malgorzata;
Johnson, Thomas A;
Schiltz, R Louis;
Hager, Gordon L

Publication type:

Article

JMJD1C demethylates MDC1 to regulate the RNF8 and BRCA1-mediated chromatin response to DNA breaks.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1425, doi. 10.1038/nsmb.2702

By:

Watanabe, Sugiko;
Watanabe, Kenji;
Akimov, Vyacheslav;
Bartkova, Jirina;
Blagoev, Blagoy;
Lukas, Jiri;
Bartek, Jiri

Publication type:

Article

Live visualization of chromatin dynamics with fluorescent TALEs.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 11, p. 1321, doi. 10.1038/nsmb.2680

By:

Miyanari, Yusuke;
Ziegler-Birling, Céline;
Torres-Padilla, Maria-Elena

Publication type:

Article

Cycles in spatial and temporal chromosomal organization driven by the circadian clock.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1206, doi. 10.1038/nsmb.2667

By:

Aguilar-Arnal, Lorena;
Hakim, Ofir;
Patel, Vishal R;
Baldi, Pierre;
Hager, Gordon L;
Sassone-Corsi, Paolo

Publication type:

Article

Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1236, doi. 10.1038/nsmb1013-1236b

By:

Erkek, Serap;
Hisano, Mizue;
Liang, Ching-Yeu;
Gill, Mark;
Murr, Rabih;
Dieker, Jürgen;
Schübeler, Dirk;
van der Vlag, Johan;
Stadler, Michael B;
Peters, Antoine H F M

Publication type:

Article

Chromatin affects copy gain.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 9, p. 1025, doi. 10.1038/nsmb.2671

By:

Heinrichs, Arianne

Publication type:

Article

Nucleosome sliding mechanisms: new twists in a looped history.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 9, p. 1026, doi. 10.1038/nsmb.2648

By:

Mueller-Planitz, Felix;
Klinker, Henrike;
Becker, Peter B

Publication type:

Article

Nucleosome dynamics regulates DNA processing.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 836, doi. 10.1038/nsmb.2585

By:

Adkins, Nicholas L;
Niu, Hengyao;
Sung, Patrick;
Peterson, Craig L

Publication type:

Article

Scratching the (lateral) surface of chromatin regulation by histone modifications.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 6, p. 657, doi. 10.1038/nsmb.2581

By:

Tropberger, Philipp;
Schneider, Robert

Publication type:

Article

Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 868, doi. 10.1038/nsmb.2599

By:

Erkek, Serap;
Hisano, Mizue;
Liang, Ching-Yeu;
Gill, Mark;
Murr, Rabih;
Dieker, Jürgen;
Schübeler, Dirk;
Vlag, Johan van der;
Stadler, Michael B;
Peters, Antoine H F M

Publication type:

Article

Solo or doppio: how many CENP-As make a centromeric nucleosome?

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 6, p. 648, doi. 10.1038/nsmb.2602

By:

Dunleavy, Elaine M;
Zhang, Weiguo;
Karpen, Gary H

Publication type:

Article

Evidence for monomeric actin function in INO80 chromatin remodeling.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 4, p. 426, doi. 10.1038/nsmb.2529

By:

Kapoor, Prabodh;
Chen, Mingming;
Winkler, Duane David;
Luger, Karolin;
Shen, Xuetong

Publication type:

Article

Monomeric actin required for INO80 remodeling.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 4, p. 405, doi. 10.1038/nsmb.2553

By:

Bartholomew, Blaine

Publication type:

Article

Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 3, p. 317, doi. 10.1038/nsmb.2499

By:

Tang, Jiangbo;
Cho, Nam Woo;
Cui, Gaofeng;
Manion, Erica M;
Shanbhag, Niraj M;
Botuyan, Maria Victoria;
Mer, Georges;
Greenberg, Roger A

Publication type:

Article

Determinants of nucleosome positioning.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 3, p. 267, doi. 10.1038/nsmb.2506

By:

Struhl, Kevin;
Segal, Eran

Publication type:

Article

Nucleosome mobilization by ISW2 requires the concerted action of the ATPase and SLIDE domains.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 2, p. 222, doi. 10.1038/nsmb.2486

By:

Hota, Swetansu K;
Bhardwaj, Saurabh K;
Deindl, Sebastian;
Lin, Yuan-chi;
Zhuang, Xiaowei;
Bartholomew, Blaine

Publication type:

Article

Chromatin proteins captured by ChIP-mass spectrometry are linked to dosage compensation in Drosophila.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 2, p. 202, doi. 10.1038/nsmb.2477

By:

Wang, Charlotte I;
Alekseyenko, Artyom A;
LeRoy, Gary;
Elia, Andrew EH;
Gorchakov, Andrey A;
Britton, Laura-Mae P;
Elledge, Stephen J;
Kharchenko, Peter V;
Garcia, Benjamin A;
Kuroda, Mitzi I

Publication type:

Article

Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 12, p. 1273, doi. 10.1038/nsmb.2449

By:

Brien, Gerard L;
Gambero, Guillermo;
O'Connell, David J;
Jerman, Emilia;
Turner, Siobhán A;
Egan, Chris M;
Dunne, Eiseart J;
Jurgens, Maike C;
Wynne, Kieran;
Piao, Lianhua;
Lohan, Amanda J;
Ferguson, Neil;
Shi, Xiaobing;
Sinha, Krishna M;
Loftus, Brendan J;
Cagney, Gerard;
Bracken, Adrian P

Publication type:

Article