Works matching AU Yokoyama, Shigeyuki
Results: 279
Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification.
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- Nature, 1988, v. 336, n. 6195, p. 179, doi. 10.1038/336179a0
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- Article
Trm5 and TrmD: Two Enzymes from Distinct Origins Catalyze the Identical tRNA Modification, m¹G37.
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- Biomolecules (2218-273X), 2017, v. 7, n. 1, p. 32, doi. 10.3390/biom7010032
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- Article
Structural insight into RNA recognition motifs: versatile molecular Lego building blocks for biological systems.
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- Wiley Interdisciplinary Reviews: RNA, 2012, v. 3, n. 2, p. 229, doi. 10.1002/wrna.1107
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Ratcheting of RNA polymerase toward structural principles of RNA polymerase operations.
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- 2015
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- Opinion
Structural insights into the similar modes of Nrf2 transcription factor recognition by the cytoplasmic repressor Keap1.
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- Journal of Synchrotron Radiation, 2008, v. 15, n. 3, p. 273, doi. 10.1107/S090904950705114X
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Towards the high-throughput expression of metalloproteins from the Mycobacterium tuberculosis genome.
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- Journal of Synchrotron Radiation, 2005, v. 12, n. 1, p. 4, doi. 10.1107/S0909049504027864
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Patent protection for protein structure analysis.
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- Nature Biotechnology, 2004, v. 22, n. 1, p. 109, doi. 10.1038/nbt0104-109
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An unnatural base pair for incorporating amino acid analogs into proteins.
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- Nature Biotechnology, 2002, v. 20, n. 2, p. 177, doi. 10.1038/nbt0202-177
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- Article
Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus
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- FEBS Letters, 2003, v. 535, n. 1-3, p. 94, doi. 10.1016/S0014-5793(02)03880-2
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- Article
Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure.
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- EMBO Journal, 2003, v. 22, n. 21, p. 5918, doi. 10.1093/emboj/cdg563
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- Article
ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding.
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- EMBO Journal, 2003, v. 22, n. 3, p. 676, doi. 10.1093/emboj/cdg053
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- Article
Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA.
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- EMBO Journal, 2001, v. 20, n. 23, p. 6612, doi. 10.1093/emboj/20.23.6612
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The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.
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- EMBO Journal, 2001, v. 20, n. 3, p. 562, doi. 10.1093/emboj/20.3.562
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Structure of the EMAPII domain of human aminoacyl-tRNA synthetase complex reveals evolutionary dimer mimicry.
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- EMBO Journal, 2001, v. 20, n. 3, p. 570, doi. 10.1093/emboj/20.3.570
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- Article
A helix-turn-helix structure unit in human centromere protein B (CENP-B).
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- EMBO Journal, 1998, v. 17, n. 3, p. 827, doi. 10.1093/emboj/17.3.827
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- Article
Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion.
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- Nature Structural Biology, 2003, v. 10, n. 6, p. 425, doi. 10.1038/nsb934
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- Article
Functional convergence of two lysyl-tRNA synthetases with unrelated topologies.
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- Nature Structural Biology, 2002, v. 9, n. 4, p. 257, doi. 10.1038/nsb777
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- Article
Structural basis for anticodon recognition by discriminating glutamyl-tRNA synthetase.
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- Nature Structural Biology, 2001, v. 8, n. 3, p. 203, doi. 10.1038/84927
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Structural genomics projects in Japan.
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- Nature Structural Biology, 2000, v. 7, p. 943, doi. 10.1038/80712
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Comprehensive bioinformatics analysis of cell-free protein synthesis: identification of multiple protein properties that correlate with successful expression.
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- FASEB Journal, 2010, v. 24, n. 4, p. 1095, doi. 10.1096/fj.09-139527
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- Article
An unnatural hydrophobic base pair system: site-specific incorporation of nucleotide analogs into DNA and RNA.
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- Nature Methods, 2006, v. 3, n. 9, p. 729, doi. 10.1038/nmeth915
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- Article
Protein photo-cross-linking in mammalian cells by site-specific incorporation of a photoreactive amino acid.
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- Nature Methods, 2005, v. 2, n. 3, p. 201, doi. 10.1038/nmeth739
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Mathematical model for empirically optimizinglarge scale production of soluble protein domains.
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- BMC Bioinformatics, 2010, v. 11, p. 113, doi. 10.1186/1471-2105-11-113
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Identification of putative domain linkers by a neural network -- application to a large sequence database.
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- BMC Bioinformatics, 2006, v. 7, p. 1, doi. 10.1186/1471-2105-7-323
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- Article
Thioether Macrocyclic Peptides Selected against TET1 Compact Catalytic Domain Inhibit TET1 Catalytic Activity.
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- ChemBioChem, 2018, v. 19, n. 9, p. 979, doi. 10.1002/cbic.201800047
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- Article
An automated system designed for large scale NMR data deposition and annotation: application to over 600 assigned chemical shift data entries to the BioMagResBank from the Riken Structural Genomics/Proteomics Initiative internal database.
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- Journal of Biomolecular NMR, 2012, v. 53, n. 4, p. 311, doi. 10.1007/s10858-012-9641-6
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Automated assignment of NMR chemical shifts using peak-particle dynamics simulation with the DYNASSIGN algorithm.
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- Journal of Biomolecular NMR, 2009, v. 43, n. 2, p. 97, doi. 10.1007/s10858-008-9291-x
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KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies.
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- Journal of Biomolecular NMR, 2007, v. 39, n. 1, p. 31, doi. 10.1007/s10858-007-9175-5
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Improving cell-free protein synthesis for stable-isotope labeling.
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- Journal of Biomolecular NMR, 2007, v. 37, n. 3, p. 225, doi. 10.1007/s10858-006-9127-5
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- Article
<sup>1</sup>H, <sup>13</sup>C and <sup>15</sup>N Resonance Assignments of the 2′-5′ RNA Ligase-like Protein from Pyrococcus furiosus.
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- Journal of Biomolecular NMR, 2006, v. 36, p. 16, doi. 10.1007/s10858-005-5581-8
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Solution Structure of the Mouse Enhancer of Rudimentary Protein Reveals a Novel Fold.
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- Journal of Biomolecular NMR, 2005, v. 32, n. 4, p. 329, doi. 10.1007/s10858-005-7959-z
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Letter to the Editor: Backbone<sup>1</sup>H,<sup>13</sup>C and<sup>15</sup>N resonance assignments for the Mg<sup>2+</sup>-bound form of the Ca<sup>2+</sup>-binding photoprotein aequorin.
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- Journal of Biomolecular NMR, 2005, v. 31, n. 4, p. 375, doi. 10.1007/s10858-005-1609-3
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Solution structure of the Src homology 2 domain from?the human feline sarcoma oncogene Fes.
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- Journal of Biomolecular NMR, 2005, v. 31, n. 4, p. 357, doi. 10.1007/s10858-005-0946-6
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Letter to the Editor: NMR assignment of the SH2 domain from the human feline sarcoma oncogene FES.
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- Journal of Biomolecular NMR, 2004, v. 30, n. 4, p. 463, doi. 10.1007/s10858-004-5432-z
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Letter to the Editor: NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
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- Journal of Biomolecular NMR, 2004, v. 29, n. 2, p. 205, doi. 10.1023/B:JNMR.0000019239.44783.66
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Letter to the Editor: NMR assignment of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana.
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- Journal of Biomolecular NMR, 2004, v. 29, n. 2, p. 207, doi. 10.1023/B:JNMR.0000019241.66789.c3
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Letter to the Editor: NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease.
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- Journal of Biomolecular NMR, 2003, v. 25, n. 2, p. 153, doi. 10.1023/A:1022254432039
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- Article
Solution structure determination of the two DNA-binding domains in the Shizosaccharomyces pombe Abp1 protein by a combination of dipolar coupling and diffusion anisotropy restraints.
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- Journal of Biomolecular NMR, 2002, v. 22, n. 4, p. 333, doi. 10.1023/A:1014977808170
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- Article
Interactions of a didomain fragment of the Drosophila Sex-lethal protein with single-stranded uridine-rich oligoribonucleotides derived from the transformer and Sex-lethal messenger RNA precursors: NMR with residue-selective [5-2H]uridine substitutions.
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- Journal of Biomolecular NMR, 2000, v. 17, n. 2, p. 153, doi. 10.1023/A:1008357028116
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- Article
Inducible protein expression in Drosophila Schneider 2 cells using the lac operator-repressor system.
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- Biotechnology Letters, 2011, v. 33, n. 12, p. 2361, doi. 10.1007/s10529-011-0721-6
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- Article
N-terminally truncated GADD34 proteins are convenient translation enhancers in a human cell-derived in vitro protein synthesis system.
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- Biotechnology Letters, 2010, v. 32, n. 7, p. 897, doi. 10.1007/s10529-010-0251-7
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A quantitative, non-radioactive single-nucleotide insertion assay for analysis of DNA replication fidelity by using an automated DNA sequencer.
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- Biotechnology Letters, 2004, v. 26, n. 12, p. 999, doi. 10.1023/B:BILE.0000030047.32578.82
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Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein.
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- Nature, 2010, v. 468, n. 7326, p. 978, doi. 10.1038/nature09573
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Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions.
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- Nature, 2010, v. 467, n. 7315, p. 612, doi. 10.1038/nature09411
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- Article
RIKEN aids international structural genomics efforts.
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- 2007
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- Letter
Synthesis Of N-Labeled Peptidyl AMP.
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- Nucleosides, Nucleotides & Nucleic Acids, 2000, v. 19, n. 10-12, p. 1993, doi. 10.1080/15257770008045473
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- Article
The zinc-binding region (ZBR) fragment of Emi2 can inhibit APC/C by targeting its association with the coactivator Cdc20 and UBE2C-mediated ubiquitylation.
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- FEBS Open Bio, 2014, v. 4, p. 689, doi. 10.1016/j.fob.2014.06.010
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- Article
The zinc‐binding region (ZBR) fragment of Emi2 can inhibit APC/C by targeting its association with the coactivator Cdc20 and UBE2C‐mediated ubiquitylation.
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- FEBS Open Bio, 2014, v. 4, n. 1, p. 689, doi. 10.1016/j.fob.2014.06.010
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- Article
Inhibition of a NEDD8 Cascade Restores Restriction of HIV by APOBEC3G.
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- PLoS Pathogens, 2012, v. 8, n. 12, p. 1, doi. 10.1371/journal.ppat.1003085
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Application of plug-plug technique to ACE experiments for discovery of peptides binding to a larger target protein: A model study of calmodulin-binding fragments selected from a digested mixture of reduced BSA.
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- Electrophoresis, 2014, v. 35, n. 6, p. 846, doi. 10.1002/elps.201300339
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- Article