Works matching AU Ha, Taekjip

Results: 123

Cover Picture: Single-Molecule Quantum-Dot Fluorescence Resonance Energy Transfer (ChemPhysChem 5/2005).

Published in:

ChemPhysChem, 2005, v. 6, n. 5, p. 753, doi. 10.1002/cphc.200590006

By:

Sungchul Hohng;
Taekjip Ha

Publication type:

Article

Single-Molecule Quantum-Dot Fluorescence Resonance Energy Transfer.

Published in:

ChemPhysChem, 2005, v. 6, n. 5, p. 956, doi. 10.1002/cphc.200400557

By:

Sungchul Hohng;
Taekjip Ha

Publication type:

Article

Single-Molecule Four-Color FRET.

Published in:

Angewandte Chemie, 2010, v. 122, n. 51, p. 10118, doi. 10.1002/ange.201005402

By:

Lee, Jinwoo;
Lee, Sanghwa;
Ragunathan, Kaushik;
Joo, Chirlmin;
Ha, Taekjip;
Hohng, Sungchul

Publication type:

Article

Forcing a connection: Impacts of single-molecule force spectroscopy on in vivo tension sensing.

Published in:

Biopolymers, 2011, v. 95, n. 5, p. 332, doi. 10.1002/bip.21587

By:

Brenner, Michael D.;
Zhou, Ruobo;
Ha, Taekjip

Publication type:

Article

Cover Picture: Single-Molecule Studies of HIV-1 Protease Catalysis Enabled by Chemical Protein Synthesis (Isr. J. Chem. 8-9/2011).

Published in:

Israel Journal of Chemistry, 2011, v. 51, n. 8/9, p. 845, doi. 10.1002/ijch.201190011

By:

Torbeev, Vladimir Yu.;
Myong, Su-A;
Ha, Taekjip;
Kent, Stephen B. H.

Publication type:

Article

Single-Molecule Studies of HIV-1 Protease Catalysis Enabled by Chemical Protein Synthesis.

Published in:

Israel Journal of Chemistry, 2011, v. 51, n. 8/9, p. 960, doi. 10.1002/ijch.201100102

By:

Torbeev, Vladimir Yu.;
Myong, Su-A;
Ha, Taekjip;
Kent, Stephen B. H.

Publication type:

Article

Dependence of nucleosome mechanical stability on DNA mismatches.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95514

By:

Ngo, Thuy T. M.;
Liu, Bailey;
Feng Wang;
Basu, Aakash;
Wu, Carl;
Taekjip Ha

Publication type:

Article

Dynamic 1D search and processive nucleosome translocations by RSC and ISW2 chromatin remodelers.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.91433

By:

Jee Min Kim;
Carcamo, Claudia C.;
Jazani, Sina;
Zepei Xie;
Feng, Xinyu A.;
Yamadi, Maryam;
Poyton, Matthew;
Holland, Katie L.;
Grimm, Jonathan B.;
Lavis, Luke D.;
Ha, Taekjip;
Wu, Carl

Publication type:

Article

Human Rad52 binds and wraps single-stranded DNA and mediates annealing via two hRad52–ssDNA complexes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 9, p. 2917, doi. 10.1093/nar/gkp1249

By:

Grimme, Jill M.;
Honda, Masayoshi;
Wright, Rebecca;
Okuno, Yusuke;
Rothenberg, Eli;
Mazin, Alexander V.;
Ha, Taekjip;
Spies, Maria

Publication type:

Article

Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 3, p. 999, doi. 10.1093/nar/gkl1124

By:

Arluison, Véronique;
Hohng, Sungchul;
Roy, Rahul;
Pellegrini, Olivier;
Régnier, Philippe;
Ha, Taekjip

Publication type:

Article

Unraveling helicase mechanisms one molecule at a time.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 15, p. 4225, doi. 10.1093/nar/gkl452

By:

Rasnik, Ivan;
Myong, Sua;
Ha, Taekjip

Publication type:

Article

Conformational model of the Holliday junction transition deduced from molecular dynamics simulations.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 22, p. 6683

By:

Yu, Jin;
Ha, Taekjip;
Schulten, Klaus

Publication type:

Article

Genome-wide analysis of DNA-PK-bound MRN cleavage products supports a sequential model of DSB repair pathway choice.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41544-8

By:

Deshpande, Rajashree A.;
Marin-Gonzalez, Alberto;
Barnes, Hannah K.;
Woolley, Phillip R.;
Ha, Taekjip;
Paull, Tanya T.

Publication type:

Article

Membrane compression by synaptic vesicle exocytosis triggers ultrafast endocytosis.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38595-2

By:

Ogunmowo, Tyler H.;
Jing, Haoyuan;
Raychaudhuri, Sumana;
Kusick, Grant F.;
Imoto, Yuuta;
Li, Shuo;
Itoh, Kie;
Ma, Ye;
Jafri, Haani;
Dalva, Matthew B.;
Chapman, Edwin R.;
Ha, Taekjip;
Watanabe, Shigeki;
Liu, Jian

Publication type:

Article

Catalytic DNA Polymerization Can Be Expedited by Active Product Release**.

Published in:

Angewandte Chemie International Edition, 2022, v. 61, n. 24, p. 1, doi. 10.1002/anie.202114581

By:

Moerman, Pepijn G.;
Gavrilov, Momcilo;
Ha, Taekjip;
Schulman, Rebecca

Publication type:

Article

Single-molecule imaging reveals the translocation and DNA looping dynamics of hepatitis C virus NS3 helicase.

Published in:

Protein Science: A Publication of the Protein Society, 2017, v. 26, n. 7, p. 1391, doi. 10.1002/pro.3136

By:

Lin, Chang‐Ting;
Tritschler, Felix;
Lee, Kyung Suk;
Gu, Meigang;
Rice, Charles M.;
Ha, Taekjip

Publication type:

Article

The SOSS1 single-stranded DNA binding complex promotes DNA end resection in concert with Exo1.

Published in:

EMBO Journal, 2013, v. 32, n. 1, p. 126, doi. 10.1038/emboj.2012.314

By:

Yang, Soo‐Hyun;
Zhou, Ruobo;
Campbell, Judith;
Chen, Junjie;
Ha, Taekjip;
Paull, Tanya T

Publication type:

Article

Tyrosine phosphorylation enhances RAD52-mediated annealing by modulating its DNA binding.

Published in:

EMBO Journal, 2011, v. 30, n. 16, p. 3368, doi. 10.1038/emboj.2011.238

By:

Honda, Masayoshi;
Okuno, Yusuke;
Yoo, Jungmin;
Ha, Taekjip;
Spies, Maria

Publication type:

Article

5′-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase.

Published in:

EMBO Journal, 2010, v. 29, n. 22, p. 3826, doi. 10.1038/emboj.2010.242

By:

Tomko, Eric J;
Jia, Haifeng;
Park, Jeehae;
Maluf, Nasib K;
Ha, Taekjip;
Lohman, Timothy M

Publication type:

Article

BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation.

Published in:

EMBO Journal, 2009, v. 28, n. 4, p. 405, doi. 10.1038/emboj.2008.298

By:

Yodh, Jaya G.;
Stevens, Benjamin C.;
Kanagaraj, Radhakrishnan;
Janscak, Pavel;
Ha, Taekjip

Publication type:

Article

Branch migration enzyme as a Brownian ratchet.

Published in:

EMBO Journal, 2008, v. 27, n. 12, p. 1727, doi. 10.1038/emboj.2008.106

By:

Rasnik, Ivan;
Yong-Joo Jeong;
McKinney, Sean A.;
Rajagopal, Vaishnavi;
Patel, Smita S;
Ha, Taekjip

Publication type:

Article

A rule of seven in Watson-Crick base-pairing of mismatched sequences.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 6, p. 623, doi. 10.1038/nsmb.2294

By:

Cisse, Ibrahim I;
Kim, Hajin;
Ha, Taekjip

Publication type:

Article

Complexin and Ca<sup>2+</sup> stimulate SNARE-mediated membrane fusion.

Published in:

Nature Structural & Molecular Biology, 2008, v. 15, n. 7, p. 707, doi. 10.1038/nsmb.1446

By:

Yoon, Tae-Young;
Lu, Xiaobing;
Diao, Jiajie;
Lee, Soo-Min;
Ha, Taekjip;
Shin, Yeon-Kyun

Publication type:

Article

Erratum: Observation of internal cleavage and ligation reactions of a ribozyme.

Published in:

2004

By:

Nahas, Michelle;
Wilson, Timothy J;
Hohng, Sungchul;
Jarvie, Kaera;
Lilley, David M J;
Ha, Taekjip

Publication type:

Correction Notice

Observation of internal cleavage and ligation reactions of a ribozyme.

Published in:

Nature Structural & Molecular Biology, 2004, v. 11, n. 11, p. 1107, doi. 10.1038/nsmb842

By:

Nahas, Michelle K.;
Wilson, Timothy J.;
Hohng, Sungchul;
Jarvie, Kaera;
Lilley, David M. J.;
Ha, Taekjip

Publication type:

Article

COL2A1 Is a Novel Biomarker of Melanoma Tumor Repopulating Cells.

Published in:

Biomedicines, 2020, v. 8, n. 9, p. 360, doi. 10.3390/biomedicines8090360

By:

Talluri, Bhavana;
Amar, Kshitij;
Saul, Michael;
Shireen, Tasnim;
Konjufca, Vjollca;
Ma, Jian;
Ha, Taekjip;
Chowdhury, Farhan

Publication type:

Article

FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.60416

By:

Lerner, Eitan;
Barth, Anders;
Hendrix, Jelle;
Ambrose, Benjamin;
Birkedal, Victoria;
Blanchard, Scott C.;
Börner, Richard;
Hoi Sung Chung;
Cordes, Thorben;
Craggs, Timothy D.;
Deniz, Ashok A.;
Diao, Jiajie;
Fei, Jingyi;
Gonzalez, Ruben L.;
Gopich, Irina V.;
Ha, Taekjip;
Hanke, Christian A.;
Haran, Gilad;
Hatzakis, Nikos S.;
Sungchul Hohng

Publication type:

Article

Voltage-gated sodium channels assemble and gate as dimers.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-02262-0

By:

Clatot, Jérôme;
Hoshi, Malcolm;
Xiaoping Wan;
Haiyan Liu;
Jain, Ankur;
Shinlapawittayatorn, Krekwit;
Marionneau, Céline;
Ficker, Eckhard;
Ha, Taekjip;
Deschênes, Isabelle

Publication type:

Article

Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00536-1

By:

Abeysirigunawardena, Sanjaya C.;
Hajin Kim;
Lai, Jonathan;
Ragunathan, Kaushik;
Rappé, Mollie C.;
Luthey-Schulten, Zaida;
Ha, Taekjip;
Woodson, Sarah A.

Publication type:

Article

Engineering Functional Membrane–Membrane Interfaces by InterSpy.

Published in:

Small, 2023, v. 19, n. 13, p. 1, doi. 10.1002/smll.202202104

By:

Moghimianavval, Hossein;
Patel, Chintan;
Mohapatra, Sonisilpa;
Hwang, Sung‐Won;
Kayikcioglu, Tunc;
Bashirzadeh, Yashar;
Liu, Allen P.;
Ha, Taekjip

Publication type:

Article

Dynamin 1xA interacts with Endophilin A1 via its spliced long C-terminus for ultrafast endocytosis.

Published in:

EMBO Journal, 2024, v. 43, n. 16, p. 3327, doi. 10.1038/s44318-024-00145-x

By:

Imoto, Yuuta;
Xue, Jing;
Luo, Lin;
Raychaudhuri, Sumana;
Itoh, Kie;
Ma, Ye;
Craft, George E;
Kwan, Ann H;
Ogunmowo, Tyler H;
Ho, Annie;
Mackay, Joel P;
Ha, Taekjip;
Watanabe, Shigeki;
Robinson, Phillip J

Publication type:

Article

Targeting DNA G-Quadruplexes with Helical Small Molecules.

Published in:

ChemBioChem, 2014, v. 15, n. 17, p. 2563, doi. 10.1002/cbic.201402439

By:

Müller, Sebastian;
Laxmi‐Reddy, Katta;
Jena, Prakrit V.;
Baptiste, Benoit;
Dong, Zeyuan;
Godde, Frédéric;
Ha, Taekjip;
Rodriguez, Raphaël;
Balasubramanian, Shankar;
Huc, Ivan

Publication type:

Article

Activated GTPase movement on an RNA scaffold drives co-translational protein targeting.

Published in:

Nature, 2012, v. 492, n. 7428, p. 271, doi. 10.1038/nature11726

By:

Shen, Kuang;
Arslan, Sinan;
Akopian, David;
Ha, Taekjip;
Shan, Shu-ou

Publication type:

Article

Antiparallel EmrE exports drugs by exchanging between asymmetric structures.

Published in:

Nature, 2012, v. 481, n. 7379, p. 45, doi. 10.1038/nature10703

By:

Morrison, Emma A.;
DeKoster, Gregory T.;
Dutta, Supratik;
Vafabakhsh, Reza;
Clarkson, Michael W.;
Bahl, Arjun;
Kern, Dorothee;
Ha, Taekjip;
Henzler-Wildman, Katherine A.

Publication type:

Article

Probing cellular protein complexes using single-molecule pull-down.

Published in:

Nature, 2011, v. 473, n. 7348, p. 484, doi. 10.1038/nature10016

By:

Jain, Ankur;
Ruijie Liu;
Ramani, Biswarathan;
Arauz, Edwin;
Ishitsuka, Yuji;
Ragunathan, Kaushik;
Jeehae Park;
Jie Chen;
Xiang, Yang K.;
Ha, Taekjip

Publication type:

Article

Measuring mechanical tension across vinculin reveals regulation of focal adhesion dynamics.

Published in:

Nature, 2010, v. 466, n. 7303, p. 263, doi. 10.1038/nature09198

By:

Grashoff, Carsten;
Hoffman, Brenton D.;
Brenner, Michael D.;
Zhou, Ruobo;
Parsons, Maddy;
Yang, Michael T.;
McLean, Mark A.;
Sligar, Stephen G.;
Chen, Christopher S.;
Ha, Taekjip;
Schwartz, Martin A.

Publication type:

Article

Coordinating DNA replication by means of priming loop and differential synthesis rate.

Published in:

Nature, 2009, v. 462, n. 7275, p. 940, doi. 10.1038/nature08611

By:

Pandey, Manjula;
Syed, Salman;
Donmez, Ilker;
Patel, Gayatri;
Ha, Taekjip;
Patel, Smita S.

Publication type:

Article

SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

Published in:

2009

By:

Roy, Rahul;
Kozlov, Alexander G.;
Lohman, Timothy M.;
Ha, Taekjip

Publication type:

Correction Notice

SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

Published in:

Nature, 2009, v. 461, n. 7267, p. 1092, doi. 10.1038/nature08442

By:

Roy, Rahul;
Kozlov, Alexander G.;
Lohman, Timothy M.;
Ha, Taekjip

Publication type:

Article

Photonics: How nanocrystals lost their blink.

Published in:

Nature, 2009, v. 459, n. 7247, p. 649, doi. 10.1038/459649a

By:

Ha, Taekjip

Publication type:

Article

ATPase-driven oligomerization of RIG-I on RNA allows optimal activation of type-I interferon.

Published in:

EMBO Reports, 2013, v. 14, n. 9, p. 780, doi. 10.1038/embor.2013.102

By:

Patel, Jenish R;
Jain, Ankur;
Chou, Yi‐ying;
Baum, Alina;
Ha, Taekjip;
García‐Sastre, Adolfo

Publication type:

Article

In Planta Single-Molecule Pull-Down Reveals Tetrameric Stoichiometry of HD-ZIPIII:LITTLE ZIPPER Complexes.

Published in:

Plant Cell, 2016, v. 28, n. 8, p. 1783, doi. 10.1105/tpc.16.00289

By:

Husbands, Aman Y.;
Aggarwal, Vasudha;
Ha, Taekjip;
Timmermans, Marja C.P.

Publication type:

Article

HLTF disrupts Cas9-DNA post-cleavage complexes to allow DNA break processing.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-50080-y

By:

Reginato, Giordano;
Dello Stritto, Maria Rosaria;
Wang, Yanbo;
Hao, Jingzhou;
Pavani, Raphael;
Schmitz, Michael;
Halder, Swagata;
Morin, Vincent;
Cannavo, Elda;
Ceppi, Ilaria;
Braunshier, Stefan;
Acharya, Ananya;
Ropars, Virginie;
Charbonnier, Jean-Baptiste;
Jinek, Martin;
Nussenzweig, Andrè;
Ha, Taekjip;
Cejka, Petr

Publication type:

Article

Structural basis for DNA unwinding at forked dsDNA by two coordinating Pif1 helicases.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-13414-9

By:

Nannan Su;
Byrd, Alicia K.;
Bharath, Sakshibeedu R.;
Olivia Yang;
Yu Jia;
Xuhua Tang;
Ha, Taekjip;
Raney, Kevin D.;
Haiwei Song

Publication type:

Article

Nanomechanics and co-transcriptional folding of Spinach and Mango.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-12299-y

By:

Mitra, Jaba;
Ha, Taekjip

Publication type:

Article

Single-molecule pull-down (SiMPull) for new-age biochemistry.

Published in:

BioEssays, 2014, v. 36, n. 11, p. 1109, doi. 10.1002/bies.201400090

By:

Aggarwal, Vasudha;
Ha, Taekjip

Publication type:

Article

A dendritic single-molecule fluorescent probe that is monovalent, photostable and minimally blinking.

Published in:

Nature Chemistry, 2013, v. 5, n. 8, p. 692, doi. 10.1038/nchem.1706

By:

Yang, Si Kyung;
Shi, Xinghua;
Park, Seongjin;
Ha, Taekjip;
Zimmerman, Steven C.

Publication type:

Article

DNA Damage-Induced, S-Phase Specific Phosphorylation of Orc6 is Critical for the Maintenance of Genome Stability.

Published in:

Molecular & Cellular Biology, 2023, v. 43, n. 4, p. 143, doi. 10.1080/10985549.2023.2196204

By:

Lin, Yo-Chuen;
Liu, Dazhen;
Chakraborty, Arindam;
Macias, Virgilia;
Brister, Eileen;
Sonalkar, Jay;
Shen, Linyuan;
Mitra, Jaba;
Ha, Taekjip;
Kajdacsy-Balla, Andre;
Prasanth, Kannanganattu V.;
Prasanth, Supriya G.

Publication type:

Article

Protein-guided RNA dynamics during early ribosome assembly.

Published in:

Nature, 2014, v. 506, n. 7488, p. 334, doi. 10.1038/nature13039

By:

Kim, Hajin;
Abeysirigunawarden, Sanjaya C.;
Chen, Ke;
Mayerle, Megan;
Ragunathan, Kaushik;
Luthey-Schulten, Zaida;
Ha, Taekjip;
Woodson, Sarah A.

Publication type:

Article

Determinants of target prioritization and regulatory hierarchy for the bacterial small RNA SgrS.

Published in:

Molecular Microbiology, 2019, v. 112, n. 4, p. 1199, doi. 10.1111/mmi.14355

By:

Bobrovskyy, Maksym;
Azam, Muhammad S.;
Frandsen, Jane K.;
Zhang, Jichuan;
Poddar, Anustup;
Ma, Xiangqian;
Henkin, Tina M.;
Ha, Taekjip;
Vanderpool, Carin K.

Publication type:

Article