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Regulation of Human Endogenous Metabolites by Drug Transporters and Drug Metabolizing Enzymes: An Analysis of Targeted SNP-Metabolite Associations.
Published in:
Metabolites (2218-1989), 2023, v. 13, n. 2, p. 171, doi. 10.3390/metabo13020171
By:
- Granados, Jeffry C.;
- Watrous, Jeramie D.;
- Long, Tao;
- Rosenthal, Sara Brin;
- Cheng, Susan;
- Jain, Mohit;
- Nigam, Sanjay K.
Publication type:
Article
Substantial Fat Loss in Physique Competitors Is Characterized by Increased Levels of Bile Acids, Very-Long Chain Fatty Acids, and Oxylipins.
Published in:
Metabolites (2218-1989), 2022, v. 12, n. 10, p. 928, doi. 10.3390/metabo12100928
By:
- Sarin, Heikki V.;
- Hulmi, Juha J.;
- Qin, Youwen;
- Inouye, Michael;
- Ritchie, Scott C.;
- Cheng, Susan;
- Watrous, Jeramie D.;
- Nguyen, Thien-Tu C.;
- Lee, Joseph H.;
- Jin, Zhezhen;
- Terwilliger, Joseph D.;
- Niiranen, Teemu;
- Havulinna, Aki;
- Salomaa, Veikko;
- Pietiläinen, Kirsi H.;
- Isola, Ville;
- Ahtiainen, Juha P.;
- Häkkinen, Keijo;
- Jain, Mohit;
- Perola, Markus
Publication type:
Article
Quantitative Comparison of Statistical Methods for Analyzing Human Metabolomics Data.
Published in:
Metabolites (2218-1989), 2022, v. 12, n. 6, p. 519, doi. 10.3390/metabo12060519
By:
- Henglin, Mir;
- Claggett, Brian L.;
- Antonelli, Joseph;
- Alotaibi, Mona;
- Magalang, Gino Alberto;
- Watrous, Jeramie D.;
- Lagerborg, Kim A.;
- Ovsak, Gavin;
- Musso, Gabriel;
- Demler, Olga V.;
- Vasan, Ramachandran S.;
- Larson, Martin G.;
- Jain, Mohit;
- Cheng, Susan
Publication type:
Article
One-Year Effects of Omega-3 Treatment on Fatty Acids, Oxylipins, and Related Bioactive Lipids and Their Associations with Clinical Lipid and Inflammatory Biomarkers: Findings from a Substudy of the Vitamin D and Omega-3 Trial (VITAL).
Published in:
Metabolites (2218-1989), 2020, v. 10, n. 11, p. 431, doi. 10.3390/metabo10110431
By:
- Demler, Olga V.;
- Liu, Yanyan;
- Luttmann-Gibson, Heike;
- Watrous, Jeramie D.;
- Lagerborg, Kim A.;
- Dashti, Hesam;
- Giulianini, Franco;
- Heath, Mallory;
- Camargo Jr., Carlos A.;
- Harris, William S.;
- Wohlgemuth, Jay G.;
- Andres, Allen M.;
- Tivari, Saumya;
- Long, Tao;
- Najhawan, Mahan;
- Dao, Khoi;
- Prentice, James G.;
- Larsen, Julia A.;
- Okereke, Olivia I.;
- Costenbader, Karen H.
Publication type:
Article
Statistical Workflow for Feature Selection in Human Metabolomics Data.
Published in:
Metabolites (2218-1989), 2019, v. 9, n. 7, p. 143, doi. 10.3390/metabo9070143
By:
- Antonelli, Joseph;
- Claggett, Brian L.;
- Henglin, Mir;
- Kim, Andy;
- Ovsak, Gavin;
- Kim, Nicole;
- Deng, Katherine;
- Rao, Kevin;
- Tyagi, Octavia;
- Watrous, Jeramie D.;
- Lagerborg, Kim A.;
- Hushcha, Pavel V.;
- Demler, Olga V.;
- Mora, Samia;
- Niiranen, Teemu J.;
- Pereira, Alexandre C.;
- Jain, Mohit;
- Cheng, Susan
Publication type:
Article
A Single Visualization Technique for Displaying Multiple Metabolite–Phenotype Associations.
Published in:
Metabolites (2218-1989), 2019, v. 9, n. 7, p. 128, doi. 10.3390/metabo9070128
By:
- Henglin, Mir;
- Niiranen, Teemu;
- Watrous, Jeramie D.;
- Lagerborg, Kim A.;
- Antonelli, Joseph;
- Claggett, Brian L.;
- Demosthenes, Emmanuella J.;
- von Jeinsen, Beatrice;
- Demler, Olga;
- Vasan, Ramachandran S.;
- Larson, Martin G.;
- Jain, Mohit;
- Cheng, Susan
Publication type:
Article
Integration of metabolomics, genomics, and immune phenotypes reveals the causal roles of metabolites in disease.
Published in:
Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02413-z
By:
- Chu, Xiaojing;
- Jaeger, Martin;
- Beumer, Joep;
- Bakker, Olivier B.;
- Aguirre-Gamboa, Raul;
- Oosting, Marije;
- Smeekens, Sanne P.;
- Moorlag, Simone;
- Mourits, Vera P.;
- Koeken, Valerie A. C. M.;
- de Bree, Charlotte;
- Jansen, Trees;
- Mathews, Ian T.;
- Dao, Khoi;
- Najhawan, Mahan;
- Watrous, Jeramie D.;
- Joosten, Irma;
- Sharma, Sonia;
- Koenen, Hans J. P. M.;
- Withoff, Sebo
Publication type:
Article
Nontargeted mass spectrometry of dried blood spots for interrogation of the human circulating metabolome.
Published in:
Journal of Mass Spectrometry, 2021, v. 56, n. 8, p. 1, doi. 10.1002/jms.4772
By:
- Ward, Casey;
- Nallamshetty, Shriram;
- Watrous, Jeramie D.;
- Acres, Eowyn;
- Tao Long;
- Mathews, Ian T.;
- Sharma, Sonia;
- Cheng, Susan;
- Imam, Farhad;
- Jain, Mohit
Publication type:
Article
Sex-related Differences in Eicosanoid Levels in Chronic Thromboembolic Pulmonary Hypertension.
Published in:
2023
By:
- Alotaibi, Mona;
- Fernandes, Timothy;
- Tang, Amber B.;
- Magalang, Gino Alberto;
- Watrous, Jeramie D.;
- Tao Long;
- Pretorius, Victor;
- Madani, Michael;
- Kim, Nick H.;
- Jain, Mohit;
- Cheng, Susan
Publication type:
Letter to the Editor
Comparative genomics and metabolic profiling of the genus Lysobacter.
Published in:
BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2191-z
By:
- de Bruijn, Irene;
- Xu Cheng;
- de Jager, Victor;
- Gómez Expósito, Ruth;
- Watrous, Jeramie;
- Patel, Nrupali;
- Postma, Joeke;
- Dorrestein, Pieter C.;
- Kobayashi, Donald;
- Raaijmakers, Jos M.
Publication type:
Article
Yeast homologs of human MCUR1 regulate mitochondrial proline metabolism.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18704-1
By:
- Zulkifli, Mohammad;
- Neff, John K.;
- Timbalia, Shrishiv A.;
- Garza, Natalie M.;
- Chen, Yingqi;
- Watrous, Jeramie D.;
- Murgia, Marta;
- Trivedi, Prachi P.;
- Anderson, Steven K.;
- Tomar, Dhanendra;
- Nilsson, Roland;
- Madesh, Muniswamy;
- Jain, Mohit;
- Gohil, Vishal M.
Publication type:
Article
Quantitative molecular networking to profile marine cyanobacterial metabolomes.
Published in:
Journal of Antibiotics, 2014, v. 67, n. 1, p. 105, doi. 10.1038/ja.2013.120
By:
- Winnikoff, Jacob R;
- Glukhov, Evgenia;
- Watrous, Jeramie;
- Dorrestein, Pieter C;
- Gerwick, William H
Publication type:
Article
Validation-based model selection for <sup>13</sup>C metabolic flux analysis with uncertain measurement errors.
Published in:
PLoS Computational Biology, 2022, v. 18, n. 4, p. 1, doi. 10.1371/journal.pcbi.1009999
By:
- Sundqvist, Nicolas;
- Grankvist, Nina;
- Watrous, Jeramie;
- Mohit, Jain;
- Nilsson, Roland;
- Cedersund, Gunnar
Publication type:
Article
Lactational delivery of Triclosan promotes non-alcoholic fatty liver disease in newborn mice.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31947-4
By:
- Weber, André A.;
- Yang, Xiaojing;
- Mennillo, Elvira;
- Ding, Jeffrey;
- Watrous, Jeramie D.;
- Jain, Mohit;
- Chen, Shujuan;
- Karin, Michael;
- Tukey, Robert H.
Publication type:
Article
Eicosanoid Inflammatory Mediators Are Robustly Associated With Blood Pressure in the General Population.
Published in:
2020
By:
- Palmu, Joonatan;
- Watrous, Jeramie D;
- Mercader, Kysha;
- Havulinna, Aki S;
- Lagerborg, Kim A;
- Salosensaari, Aaro;
- Inouye, Mike;
- Larson, Martin G;
- Rong, Jian;
- Vasan, Ramachandran S;
- Lahti, Leo;
- Andres, Allen;
- Cheng, Susan;
- Jousilahti, Pekka;
- Salomaa, Veikko;
- Jain, Mohit;
- Niiranen, Teemu J
Publication type:
journal article
The evolving field of imaging mass spectrometry and its impact on future biological research.
Published in:
Journal of Mass Spectrometry, 2011, v. 46, n. 2, p. 209, doi. 10.1002/jms.1876
By:
- Watrous, Jeramie D.;
- Alexandrov, Theodore;
- Dorrestein, Pieter C.
Publication type:
Article
The association between eicosanoids and incident atrial fibrillation in the Framingham Heart Study.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-21786-0
By:
- Kornej, Jelena;
- Qadan, Maha A.;
- Alotaibi, Mona;
- Van Wagoner, David R.;
- Watrous, Jeramie D.;
- Trinquart, Ludovic;
- Preis, Sarah R.;
- Ko, Darae;
- Jain, Mohit;
- Benjamin, Emelia J.;
- Cheng, Susan;
- Lin, Honghuang
Publication type:
Article
Taxonomic signatures of cause-specific mortality risk in human gut microbiome.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22962-y
By:
- Salosensaari, Aaro;
- Laitinen, Ville;
- Havulinna, Aki S.;
- Meric, Guillaume;
- Cheng, Susan;
- Perola, Markus;
- Valsta, Liisa;
- Alfthan, Georg;
- Inouye, Michael;
- Watrous, Jeramie D.;
- Long, Tao;
- Salido, Rodolfo A.;
- Sanders, Karenina;
- Brennan, Caitriona;
- Humphrey, Gregory C.;
- Sanders, Jon G.;
- Jain, Mohit;
- Jousilahti, Pekka;
- Salomaa, Veikko;
- Knight, Rob
Publication type:
Article
Mapping choline metabolites in normal and transformed cells.
Published in:
Metabolomics, 2020, v. 16, n. 12, p. 1, doi. 10.1007/s11306-020-01749-0
By:
- Roci, Irena;
- Watrous, Jeramie D.;
- Lagerborg, Kim A.;
- Jain, Mohit;
- Nilsson, Roland
Publication type:
Article
Microbiota-Produced -Formyl Peptide fMLF Promotes Obesity-Induced Glucose Intolerance.
Published in:
2019
By:
- Wollam, Joshua;
- Riopel, Matthew;
- Yong-Jiang Xu;
- Johnson, Andrew M. F.;
- Ofrecio, Jachelle M.;
- Wei Ying;
- El Ouarrat, Dalila;
- Chan, Luisa S.;
- Han, Andrew W.;
- Mahmood, Nadir A.;
- Ryan, Caitlin N.;
- Yun Sok Lee;
- Watrous, Jeramie D.;
- Chordia, Mahendra D.;
- Pan, Dongfeng;
- Jain, Mohit;
- Olefsky, Jerrold M.;
- Xu, Yong-Jiang;
- Ying, Wei;
- Lee, Yun Sok
Publication type:
journal article
Imaging mass spectrometry in microbiology.
Published in:
Nature Reviews Microbiology, 2011, v. 9, n. 9, p. 683, doi. 10.1038/nrmicro2634
By:
- Watrous, Jeramie D.;
- Dorrestein, Pieter C.
Publication type:
Article
Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometry.
Published in:
GigaScience, 2015, v. 4, n. 20-24, p. 1, doi. 10.1186/s13742-015-0059-4
By:
- Oetjen, Janina;
- Veselkov, Kirill;
- Watrous, Jeramie;
- McKenzie, James S.;
- Becker, Michael;
- Hauberg-Lotte, Lena;
- Kobarg, Jan Hendrik;
- Strittmatter, Nicole;
- Mróz, Anna K.;
- Hoffmann, Franziska;
- Trede, Dennis;
- Palmer, Andrew;
- Schiffler, Stefan;
- Steinhorst, Klaus;
- Aichler, Michaela;
- Goldin, Robert;
- Guntinas-Lichius, Orlando;
- von Eggeling, Ferdinand;
- Thiele, Herbert;
- Maedler, Kathrin
Publication type:
Article
The glutamate/cystine xCT antiporter antagonizes glutamine metabolism and reduces nutrient flexibility.
Published in:
Nature Communications, 2017, v. 8, n. 4, p. 15074, doi. 10.1038/ncomms15074
By:
- Shin, Chun-Shik;
- Mishra, Prashant;
- Watrous, Jeramie D.;
- Carelli, Valerio;
- D'Aurelio, Marilena;
- Jain, Mohit;
- Chan, David C.
Publication type:
Article
Ether lipid biosynthesis promotes lifespan extension and enables diverse pro-longevity paradigms in Caenorhabditis elegans.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.82210
By:
- Cedillo, Lucydalila;
- Ahsan, Fasih M.;
- Sainan Li;
- Stuhr, Nicole L.;
- Yifei Zhou;
- Yuyao Zhang;
- Adedoja, Adebanjo;
- Murphy, Luke M.;
- Yerevanian, Armen;
- Emans, Sinclair;
- Khoi Dao;
- Zhaozhi Li;
- Peterson, Nicholas D.;
- Watrous, Jeramie;
- Jain, Mohit;
- Das, Sudeshna;
- Pukkila-Worley, Read;
- Curran, Sean P.;
- Soukas, Alexander A.
Publication type:
Article
Microbial metabolic exchange in 3D.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 770, doi. 10.1038/ismej.2012.155
By:
- Watrous, Jeramie D;
- Phelan, Vanessa V;
- Hsu, Cheng-Chih;
- Moree, Wilna J;
- Duggan, Brendan M;
- Alexandrov, Theodore;
- Dorrestein, Pieter C
Publication type:
Article
Genome mining and metabolic profiling of the rhizosphere bacterium Pseudomonas sp. SH-C52 for antimicrobial compounds.
Published in:
Frontiers in Microbiology, 2015, p. 1, doi. 10.3389/fmicb.2015.00693
By:
- Van Der Voort, Menno;
- Meijer, Harold J. G.;
- Schmidt, Yvonne;
- Watrous, Jeramie;
- Dekkers, Ester;
- Mendes, Rodrigo;
- Dorrestein, Pieter C.;
- Gross, Harald;
- Raaijmakers, Jos M.;
- Martín, Marta;
- Sattely, Elizabeth;
- Matthijs, Sandra
Publication type:
Article
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking.
Published in:
Nature Biotechnology, 2016, v. 34, n. 8, p. 828, doi. 10.1038/nbt.3597
By:
- Wang, Mingxun;
- Carver, Jeremy J;
- Phelan, Vanessa V;
- Sanchez, Laura M;
- Garg, Neha;
- Peng, Yao;
- Nguyen, Don Duy;
- Watrous, Jeramie;
- Kapono, Clifford A;
- Luzzatto-Knaan, Tal;
- Porto, Carla;
- Bouslimani, Amina;
- Melnik, Alexey V;
- Meehan, Michael J;
- Liu, Wei-Ting;
- Crüsemann, Max;
- Boudreau, Paul D;
- Esquenazi, Eduardo;
- Sandoval-Calderón, Mario;
- Kersten, Roland D
Publication type:
Article
Decreased adipose tissue oxygenation associates with insulin resistance in individuals with obesity.
Published in:
2020
By:
- Cifarelli, Vincenza;
- Beeman, Scott C.;
- Smith, Gordon I.;
- Jun Yoshino;
- Morozov, Darya;
- Beals, Joseph W.;
- Kayser, Brandon D.;
- Watrous, Jeramie D.;
- Jain, Mohit;
- Patterson, Bruce W.;
- Klein, Samuel;
- Yoshino, Jun
Publication type:
journal article
Arteriovenous Blood Metabolomics: A Readout of Intra-Tissue Metabostasis.
Published in:
Scientific Reports, 2015, p. 12757, doi. 10.1038/srep12757
By:
- Ivanisevic, Julijana;
- Elias, Darlene;
- Deguchi, Hiroshi;
- Averell, Patricia M.;
- Kurczy, Michael;
- Johnson, Caroline H.;
- Tautenhahn, Ralf;
- Zhu, Zhengjiang;
- Watrous, Jeramie;
- Jain, Mohit;
- Griffin, John;
- Patti, Gary J.;
- Siuzdak, Gary
Publication type:
Article
Molecular and chemical dialogues in bacteria-protozoa interactions.
Published in:
Scientific Reports, 2015, p. 12837, doi. 10.1038/srep12837
By:
- Song, Chunxu;
- Mazzola, Mark;
- Cheng, Xu;
- Oetjen, Janina;
- Alexandrov, Theodore;
- Dorrestein, Pieter;
- Watrous, Jeramie;
- van der Voort, Menno;
- Raaijmakers, Jos M.
Publication type:
Article

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