Works matching DE "DNA-binding proteins"

Results: 5000

Temporal course of neurodegenerative effects on cognition in old age.

Published in:

2016, isbn. 978-1-4338-2662-7

By:

Wilson, Robert S.;
Capuano, Ana W.;
Bennett, David A.;
Schneider, Julie A.;
Boyle, Patricia A.

Publication type:

Journal Article

ROCK inhibition prevents tau hyperphosphorylation and p25/CDK5 increase after global cerebral ischemia.

Published in:

2011

By:

Castro-Alvarez, John Fredy;
Gutierrez-Vargas, Johanna;
Darnaudéry, Muriel;
Cardona-Gómez, Gloria Patricia

Publication type:

Journal Article

Molecular Mechanisms of Protein Aggregation in ALS-FTD: Focus on TDP-43 and Cellular Protective Responses.

Published in:

Cells (2073-4409), 2025, v. 14, n. 10, p. 680, doi. 10.3390/cells14100680

By:

Verde, Enza Maria;
Secco, Valentina;
Ghezzi, Andrea;
Mandrioli, Jessica;
Carra, Serena

Publication type:

Article

Investigating the Associations Between Hmga2 Overexpression, R-Loop Reduction, and Bone Loss in Aging Mice.

Published in:

Medicina (1010660X), 2025, v. 61, n. 5, p. 820, doi. 10.3390/medicina61050820

By:

Cao, Yangyang;
Wang, Yantong;
Xia, Dengsheng

Publication type:

Article

An ancient protein-DNA interaction underlying metazoan sex determination.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 6, p. 442, doi. 10.1038/nsmb.3032

By:

Murphy, Mark W;
Lee, John K;
Rojo, Sandra;
Gearhart, Micah D;
Kurahashi, Kayo;
Banerjee, Surajit;
Loeuille, Guy-André;
Bashamboo, Anu;
McElreavey, Kenneth;
Zarkower, David;
Aihara, Hideki;
Bardwell, Vivian J

Publication type:

Article

Tetrameric Ctp1 coordinates DNA binding and DNA bridging in DNA double-strand-break repair.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 2, p. 158, doi. 10.1038/nsmb.2945

By:

Andres, Sara N;
Appel, C Denise;
Westmoreland, James W;
Williams, Jessica S;
Nguyen, Yvonne;
Robertson, Patrick D;
Resnick, Michael A;
Williams, R Scott

Publication type:

Article

The DNA-binding domain mediates both nuclear and cytosolic functions of p53.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 6, p. 535, doi. 10.1038/nsmb.2829

By:

Follis, Ariele Viacava;
Llambi, Fabien;
Ou, Li;
Baran, Katherine;
Green, Douglas R;
Kriwacki, Richard W

Publication type:

Article

Association of condensin with chromosomes depends on DNA binding by its HEAT-repeat subunits.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 6, p. 560, doi. 10.1038/nsmb.2831

By:

Piazza, Ilaria;
Rutkowska, Anna;
Ori, Alessandro;
Walczak, Marta;
Metz, Jutta;
Pelechano, Vicent;
Beck, Martin;
Haering, Christian H

Publication type:

Article

Sustained active site rigidity during synthesis by human DNA polymerase μ.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 3, p. 253, doi. 10.1038/nsmb.2766

By:

Moon, Andrea F;
Pryor, John M;
Ramsden, Dale A;
Kunkel, Thomas A;
Bebenek, Katarzyna;
Pedersen, Lars C

Publication type:

Article

Prereplication-complex formation: a molecular double take?

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 20, doi. 10.1038/nsmb.2738

By:

Yardimci, Hasan;
Walter, Johannes C

Publication type:

Article

Staufen1 senses overall transcript secondary structure to regulate translation.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 26, doi. 10.1038/nsmb.2739

By:

Ricci, Emiliano P;
Kucukural, Alper;
Cenik, Can;
Mercier, Blandine C;
Singh, Guramrit;
Heyer, Erin E;
Ashar-Patel, Ami;
Peng, Lingtao;
Moore, Melissa J

Publication type:

Article

Structural basis for RNA recognition by a dimeric PPR-protein complex.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1377, doi. 10.1038/nsmb.2710

By:

Ke, Jiyuan;
Chen, Run-Ze;
Ban, Ting;
Zhou, X Edward;
Gu, Xin;
Tan, M H Eileen;
Chen, Chen;
Kang, Yanyong;
Brunzelle, Joseph S;
Zhu, Jian-Kang;
Melcher, Karsten;
Xu, H Eric

Publication type:

Article

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1434, doi. 10.1038/nsmb.2699

By:

Lovci, Michael T;
Ghanem, Dana;
Marr, Henry;
Arnold, Justin;
Gee, Sherry;
Parra, Marilyn;
Liang, Tiffany Y;
Stark, Thomas J;
Gehman, Lauren T;
Hoon, Shawn;
Massirer, Katlin B;
Pratt, Gabriel A;
Black, Douglas L;
Gray, Joe W;
Conboy, John G;
Yeo, Gene W

Publication type:

Article

High-resolution structure of TBP with TAF1 reveals anchoring patterns in transcriptional regulation.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 8, p. 1008, doi. 10.1038/nsmb.2611

By:

Anandapadamanaban, Madhanagopal;
Andresen, Cecilia;
Helander, Sara;
Ohyama, Yoshifumi;
Siponen, Marina I;
Lundström, Patrik;
Kokubo, Tetsuro;
Ikura, Mitsuhiko;
Moche, Martin;
Sunnerhagen, Maria

Publication type:

Article

A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 859, doi. 10.1038/nsmb.2597

By:

Winkler, Andreas;
Heintz, Udo;
Lindner, Robert;
Reinstein, Jochen;
Shoeman, Robert L;
Schlichting, Ilme

Publication type:

Article

Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 6, p. 740, doi. 10.1038/nsmb.2568

By:

Rajagopalan, Senapathy;
Teter, Sarah J;
Zwart, Petrus H;
Brennan, Richard G;
Phillips, Kevin J;
Kiley, Patricia J

Publication type:

Article

Structure-function analyses of the human SIX1-EYA2 complex reveal insights into metastasis and BOR syndrome.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 4, p. 447, doi. 10.1038/nsmb.2505

By:

Patrick, Aaron N;
Cabrera, Joshua H;
Smith, Anna L;
Chen, Xiaojiang S;
Ford, Heide L;
Zhao, Rui

Publication type:

Article

Entropy controls activity.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 8, p. 743, doi. 10.1038/nsmb.2361

By:

Montoya, Michelle

Publication type:

Article

ATP binding controls distinct structural transitions of Escherichia coli DNA gyrase in complex with DNA.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 5, p. 538, doi. 10.1038/nsmb.2278

By:

Basu, Aakash;
Schoeffler, Allyn J;
Berger, James M;
Bryant, Zev

Publication type:

Article

An ALS-associated mutation affecting TDP-43 enhances protein aggregation, fibril formation and neurotoxicity.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 7, p. 822, doi. 10.1038/nsmb.2053

By:

Weirui Guo;
Yanbo Chen;
Xiaohong Zhou;
Kar, Amar;
Ray, Payal;
Xiaoping Chen;
Rao, Elizabeth J.;
Mengxue Yang;
Haihong Ye;
Li Zhu;
Jianghong Liu;
Meng Xu;
Yanlian Yang;
Chen Wang;
David Zhang;
Bigio, Eileen H.;
Mesulam, Marsel;
Yan Shen;
Qi Xu;
Kazuo Fushimi

Publication type:

Article

The prospects for designer single-stranded RNA-binding proteins.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 3, p. 256, doi. 10.1038/nsmb.2005

By:

Mackay, Joel P.;
Font, Josep;
Segal, David J.

Publication type:

Article

Mre11-Rad50-Xrs2 and Sae2 promote 5′ strand resection of DNA double-strand breaks.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 12, p. 1478, doi. 10.1038/nsmb.1957

By:

Nicolette, Matthew L.;
Kihoon Lee;
Zhi Guo;
Rani, Mridula;
Chow, Julia M.;
Sang Eun Lee;
Paull, Tanya T.

Publication type:

Article

Visualizing one-dimensional diffusion of eukaryotic DNA repair factors along a chromatin lattice.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 8, p. 932, doi. 10.1038/nsmb.1858

By:

Gorman, Jason;
Plys, Aaron J.;
Visnapuu, Mari-Liis;
Alani, Eric;
Greene, Eric C.

Publication type:

Article

Molecular basis of FIR-mediated c-myc transcriptional control.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 9, p. 1058, doi. 10.1038/nsmb.1883

By:

Cukier, Cyprian D;
Hollingworth, David;
Martin, Stephen R;
Kelly, Geoff;
Díaz-Moreno, Irene;
Ramos, Andres

Publication type:

Article

Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 8, p. 1027, doi. 10.1038/nsmb.1856

By:

Daesung Kim;
Blus, Bartlomiej J.;
Chandra, Vikas;
Pengxiang Huang;
Rastinejad, Fraydoon;
Khorasanizadeh, Sepideh

Publication type:

Article

Kick-sTARting HIV-1 transcription elongation by 7SK snRNP deporTATion.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 8, p. 928, doi. 10.1038/nsmb0810-928

By:

Barboric, Matjaz;
Lenasi, Tina

Publication type:

Article

Loqs and R2D2 act sequentially in the siRNA pathway in Drosophila.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 1, p. 24, doi. 10.1038/nsmb.1735

By:

Marques, João Trindade;
Kim, Kevin;
Pei-Hsuan Wu;
Alleyne, Trevis M.;
Jafari, Nadereh;
Carthew, Richard W.

Publication type:

Article

Structure of the MLL CXXC domain–DNA complex and its functional role in MLL-AF9 leukemia.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 1, p. 62, doi. 10.1038/nsmb.1714

By:

Cierpicki, Tomasz;
Risner, Laurie E.;
Grembecka, Jolanta;
Lukasik, Stephen M.;
Popovic, Relja;
Omonkowska, Monika;
Shultis, David D.;
Zeleznik-Le, Nancy J.;
Bushweller, John H.

Publication type:

Article

A conserved activation element in BMP signaling during Drosophila development.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 1, p. 69, doi. 10.1038/nsmb.1715

By:

Weiss, Alexander;
Charbonnier, Enrica;
Ellertsdóttir, Elín;
Tsirigos, Aristotelis;
Wolf, Christian;
Schuh, Reinhard;
Pyrowolakis, George;
Affolter, Markus

Publication type:

Article

A promiscuous α-helical motif anchors viral hijackers and substrate receptors to the CUL4–DDB1 ubiquitin ligase machinery.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 1, p. 105, doi. 10.1038/nsmb.1719

By:

Ti Li;
Robert, Eva I.;
van Breugel, Pieter C.;
Strubin, Michel;
Ning Zheng

Publication type:

Article

THAP proteins target specific DNA sites through bipartite recognition of adjacent major and minor grooves.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 1, p. 117, doi. 10.1038/nsmb.1742

By:

Sabogal, Alex;
Lyubimov, Artem Y.;
Corn, Jacob E.;
Berger, James M.;
Rio, Donald C.

Publication type:

Article

Nonspecifically bound proteins spin while diffusing along DNA.

Published in:

Nature Structural & Molecular Biology, 2009, v. 16, n. 12, p. 1224, doi. 10.1038/nsmb.1716

By:

Blainey, Paul C.;
Guobin Luo;
Kou, S. C.;
Mangel, Walter F.;
Verdine, Gregory L.;
Biman Bagchi;
X. Sunney Xie

Publication type:

Article

Ubiquitin linkages make a difference.

Published in:

Nature Structural & Molecular Biology, 2009, v. 16, n. 12, p. 1209, doi. 10.1038/nsmb1209-1209

By:

Dikic, Ivan;
Dötsch, Volker

Publication type:

Article

Three-dimensional intricacies in protein-DNA recognition and transcriptional control.

Published in:

Nature Structural & Molecular Biology, 2007, v. 14, n. 12, p. 1118, doi. 10.1038/nsmb1207-1118

By:

Harrison, Stephen C.

Publication type:

Article

A common means to an end.

Published in:

Nature Structural & Molecular Biology, 2007, v. 14, n. 3, p. 176, doi. 10.1038/nsmb0307-176

By:

Haring, Stuart J.;
Wold, Marc S.

Publication type:

Article

RPA-like proteins mediate yeast telomere function.

Published in:

Nature Structural & Molecular Biology, 2007, v. 14, n. 3, p. 208, doi. 10.1038/nsmb1205

By:

Gao, Hua;
Cervantes, Rachel B.;
Mandell, Edward K.;
Otero, Joel H.;
Lundblad, Victoria

Publication type:

Article

The FtsK γ domain directs oriented DNA translocation by interacting with KOPS.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 11, p. 965, doi. 10.1038/nsmb1158

By:

Sivanathan, Viknesh;
Allen, Mark D.;
de Bekker, Charissa;
Baker, Rachel;
Arciszewska, Lidia K.;
Freund, Stefan M.;
Bycroft, Mark;
Löwe, Jan;
Sherratt, David J.

Publication type:

Article

Rad4–Rad23 interaction with SWI/SNF links ATP-dependent chromatin remodeling with nucleotide excision repair.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 10, p. 902, doi. 10.1038/nsmb1152

By:

Gong, Feng;
Fahy, Deirdre;
Smerdon, Michael J.

Publication type:

Article

The Swi5–Sfr1 complex stimulates Rhp51/Rad51 - and Dmc1-mediated DNA strand exchange in vitro.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 9, p. 823, doi. 10.1038/nsmb1136

By:

Haruta, Nami;
Kurokawa, Yumiko;
Murayama, Yasuto;
Akamatsu, Yufuko;
Unzai, Satoru;
Tsutsui, Yasuhiro;
Iwasaki, Hiroshi

Publication type:

Article

Research Highlights.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 5, p. 391, doi. 10.1038/nsmb0506-391

By:

Hwa-ping Feng;
Finkelstein, Joshua M.;
Lall, Sabbi;
Montoya, Michelle

Publication type:

Article

Mapping the interaction surface of linker histone H1<sup>0</sup> with the nucleosome of native chromatin in vivo.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 3, p. 250, doi. 10.1038/nsmb1050

By:

Brown, David T.;
Izard, Tina;
Misteli, Tom

Publication type:

Article

A conserved processing mechanism regulates the activity of transcription factors Cubitus interruptus and NF-κB.

Published in:

Nature Structural & Molecular Biology, 2005, v. 12, n. 12, p. 1045, doi. 10.1038/nsmb1018

By:

Lin Tian;
Holmgren, Robert A.;
Matouschek, Andreas

Publication type:

Article

Bacterial genetics: Hitting the CRISPR target.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 6, p. 376, doi. 10.1038/nrmicro2812

By:

Molloy, Sheilagh

Publication type:

Article

Function, structure and mechanism of bacterial photosensory LOV proteins.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 10, p. 713, doi. 10.1038/nrmicro2622

By:

Herrou, Julien;
Crosson, Sean

Publication type:

Article

The DNA-packaging nanomotor of tailed bacteriophages.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 9, p. 647, doi. 10.1038/nrmicro2632

By:

Casjens, Sherwood R.

Publication type:

Article

Bacterial DNA repair by non-homologous end joining.

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 11, p. 852, doi. 10.1038/nrmicro1768

By:

Shuman, Stewart;
Glickman, Michael S.

Publication type:

Article

Par(ting) the chromosomes.

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 2, p. 86, doi. 10.1038/nrmicro1609

By:

Jones, Susan

Publication type:

Article

The bacterial segrosome: a dynamic nucleoprotein machine for DNA trafficking and segregation.

Published in:

Nature Reviews Microbiology, 2006, v. 4, n. 2, p. 133, doi. 10.1038/nrmicro1342

By:

Hayes, Finbarr;
Barillà, Daniela

Publication type:

Article

TXNIP regulates peripheral glucose metabolism in humans.

Published in:

2007

By:

Parikh, Hemang;
Carlsson, Emma;
Chutkow, William A.;
Johansson, Lovisa E.;
Storgaard, Heidi;
Poulsen, Pernille;
Saxena, Richa;
Ladd, Christine;
Schulze, P. Christian;
Mazzini, Michael J.;
Jensen, Christine Bjørn;
Krook, Anna;
Björnholm, Marie;
Tornqvist, Hans;
Zierath, Juleen R.;
Ridderstråle, Martin;
Altshuler, David;
Lee, Richard T.;
Vaag, Allan;
Groop, Leif C.

Publication type:

journal article

Host Heterogeneous Ribonucleoprotein K (hnRNP K) as a Potential Target to Suppress Hepatitis B Virus Replication.

Published in:

PLoS Medicine, 2005, v. 2, n. 7, p. 673, doi. 10.1371/journal.pmed.0020163

By:

Ng, Lisa F. P.;
Chan, Marieta;
Soh-Ha Chan;
Cheng, Paul Chung-Pui;
Leung, Eastwood Hon-Chiu;
Wei-Ning Chen;
Ee-Chee Ren

Publication type:

Article