Works matching Chromosome structure

Results: 3277

利用改进的3DMax算法重构染色体3D结构.

Published in:

Chinese Journal of Bioinformatics, 2021, v. 19, n. 4, p. 254, doi. 10.12113/202008004

By:

刘立伟;
么会丽

Publication type:

Article

Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1944-x

By:

Lyubetsky, Vassily;
Gershgorin, Roman;
Gorbunov, Konstantin

Publication type:

Article

ParticleChromo3D: a Particle Swarm Optimization algorithm for chromosome 3D structure prediction from Hi-C data.

Published in:

BioData Mining, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13040-022-00305-x

By:

Vadnais, David;
Middleton, Michael;
Oluwadare, Oluwatosin

Publication type:

Article

The <i>Drosophila melanogaster</i> CHD1 Chromatin Remodeling Factor Modulates Global Chromosome Structure and Counteracts HP1a and H3K9me2.

Published in:

PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0059496

By:

Bugga, Lakshmi;
McDaniel, Ivy E.;
Engie, Liana;
Armstrong, Jennifer A.

Publication type:

Article

Rearrangement and inference of chromosome structures.

Published in:

Molecular Biology, 2015, v. 49, n. 3, p. 327, doi. 10.1134/S0026893315030073

By:

Gorbunov, K.;
Gershgorin, R.;
Lyubetsky, V.

Publication type:

Article

A maximum likelihood algorithm for reconstructing 3D structures of human chromosomes from chromosomal contact data.

Published in:

BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-018-4546-8

By:

Oluwadare, Oluwatosin;
Yuxiang Zhang;
Jianlin Cheng

Publication type:

Article

Irene Manton, Erwin Schrödinger and the Puzzle of Chromosome Structure.

Published in:

Journal of the History of Biology, 2016, v. 49, n. 3, p. 425, doi. 10.1007/s10739-015-9424-5

By:

Williams, Nicola

Publication type:

Article

Inferential Structure Determination of Chromosomes from Single-Cell Hi-C Data.

Published in:

PLoS Computational Biology, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.pcbi.1005292

By:

Carstens, Simeon;
Nilges, Michael;
Habeck, Michael

Publication type:

Article

Visualization of early chromosome condensation: a hierarchical folding, axial glue model of chromosome structure.

Published in:

Journal of Cell Biology, 2004, v. 166, n. 6, p. 775, doi. 10.1083/jcb.200406049

By:

Kireeva, Natashe;
Lakonishok, Margot;
Kireev, Igor;
Hirano, Tatsuya;
Belmont, Andrew S.

Publication type:

Article

The Effect of Magnesium Ions on Chromosome Structure as Observed by Helium Ion Microscopy.

Published in:

Microscopy & Microanalysis, 2014, v. 20, n. 1, p. 184, doi. 10.1017/S1431927613013792

By:

Dwiranti, Astari;
Hamano, Tohru;
Takata, Hideaki;
Nagano, Shoko;
Guo, Hongxuan;
Onishi, Keiko;
Wako, Toshiyuki;
Uchiyama, Susumu;
Fukui, Kiichi

Publication type:

Article

An Overview of Methods for Reconstructing 3-D Chromosome and Genome Structures from Hi-C Data.

Published in:

Biological Procedures Online, 2019, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12575-019-0094-0

By:

Oluwadare, Oluwatosin;
Highsmith, Max;
Cheng, Jianlin

Publication type:

Article

Chromosome inner structure investigation by electron tomography and electron diffraction in a transmission electron microscope.

Published in:

Chromosome Research, 2021, v. 29, n. 1, p. 63, doi. 10.1007/s10577-021-09661-6

By:

Phengchat, Rinyaporn;
Malac, Marek;
Hayashida, Misa

Publication type:

Article

GSDB: a database of 3D chromosome and genome structures reconstructed from Hi-C data.

Published in:

BMC Molecular & Cell Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12860-020-00304-y

By:

Oluwadare, Oluwatosin;
Highsmith, Max;
Turner, Douglass;
Lieberman-Aiden, Erez;
Cheng, Jianlin

Publication type:

Article

Semi Global Pairwise Sequence Alignment Using New Chromosome Structure Genetic Algorithm.

Published in:

Ingénierie des Systèmes d'Information, 2022, v. 27, n. 1, p. 67, doi. 10.18280/isi.270108

By:

Pujari, Jeevana Jyothi;
Kanadam, Karteeka Pavan

Publication type:

Article

Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates.

Published in:

Life (2075-1729), 2017, v. 7, n. 1, p. 9, doi. 10.3390/life7010009

By:

Gershgorin, Roman A.;
Gorbunov, Konstantin Yu.;
Zverkov, Oleg A.;
Rubanov, Lev I.;
Seliverstov, Alexandr V.;
Lyubetsky, Vassily A.

Publication type:

Article

Spaghetti Connections: Synaptonemal Complexes as a Tool to Explore Chromosome Structure, Evolution, and Meiotic Behavior in Fish.

Published in:

Cytogenetic & Genome Research, 2024, v. 164, n. 1, p. 1, doi. 10.1159/000538238

By:

Lisachov, Artem;
Dedukh, Dmitrij;
Simanovsky, Sergey;
Panthum, Thitipong;
Singchat, Worapong;
Srikulnath, Kornsorn

Publication type:

Article

Massively Parallel Sequencing Reveals the Complex Structure of an Irradiated Human Chromosome on a Mouse Background in the Tc1 Model of Down Syndrome.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060482

By:

Gribble, Susan M.;
Wiseman, Frances K.;
Clayton, Stephen;
Prigmore, Elena;
Langley, Elizabeth;
Yang, Fengtang;
Maguire, Sean;
Fu, Beiyuan;
Rajan, Diana;
Sheppard, Olivia;
Scott, Carol;
Hauser, Heidi;
Stephens, Philip J.;
Stebbings, Lucy A.;
Ng, Bee Ling;
Fitzgerald, Tomas;
Quail, Michael A.;
Banerjee, Ruby;
Rothkamm, Kai;
Tybulewicz, Victor L. J.

Publication type:

Article

A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set.

Published in:

PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0216233

By:

Pucker, Boas;
Holtgräwe, Daniela;
Stadermann, Kai Bernd;
Frey, Katharina;
Huettel, Bruno;
Reinhardt, Richard;
Weisshaar, Bernd

Publication type:

Article

Correlating the Genetic and Physical Map of Barley Chromosome 3H Revealed Limitations of the FISH-Based Mapping of Nearby Single-Copy Probes Caused by the Dynamic Structure of Metaphase Chromosomes.

Published in:

Cytogenetic & Genome Research, 2017, v. 152, n. 2, p. 90, doi. 10.1159/000478631

By:

Bustamante, Fernanda O.;
aliyeva-Schnorr, Lala;
Fuchs, Jörg;
Beier, Sebastian;
Houben, andreas

Publication type:

Article

Structure of the human chromosome interaction network.

Published in:

PLoS ONE, 2017, v. 12, n. 11, p. 1, doi. 10.1371/journal.pone.0188201

By:

Sarnataro, Sergio;
Chiariello, Andrea M.;
Esposito, Andrea;
Prisco, Antonella;
Nicodemi, Mario

Publication type:

Article

Dependence of the structure and mechanics of metaphase chromosomes on oxidized cysteines.

Published in:

Chromosome Research, 2016, v. 24, n. 3, p. 339, doi. 10.1007/s10577-016-9528-6

By:

Eastland, Adrienne;
Hornick, Jessica;
Kawamura, Ryo;
Nanavati, Dhaval;
Marko, John

Publication type:

Article

A Sir2-regulated locus control region in the recombination enhancer of Saccharomyces cerevisiae specifies chromosome III structure.

Published in:

PLoS Genetics, 2019, v. 15, n. 8, p. 1, doi. 10.1371/journal.pgen.1008339

By:

Li, Mingguang;
Fine, Ryan D.;
Dinda, Manikarna;
Bekiranov, Stefan;
Smith, Jeffrey S.

Publication type:

Article

Effect of host resistance on genetic structure of core and accessory chromosomes in Irish Zymoseptoria tritici populations.

Published in:

European Journal of Plant Pathology, 2018, v. 150, n. 1, p. 139, doi. 10.1007/s10658-017-1259-9

By:

Welch, Thomas;
Feechan, Angela;
Kildea, Steven

Publication type:

Article

Meiotic chromosome structures constrain and respond to designation of crossover sites.

Published in:

Nature, 2013, v. 502, n. 7473, p. 703, doi. 10.1038/nature12577

By:

Libuda, Diana E.;
Uzawa, Satoru;
Meyer, Barbara J.;
Villeneuve, Anne M.

Publication type:

Article

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure.

Published in:

Nature, 2013, v. 502, n. 7469, p. 59, doi. 10.1038/nature12593

By:

Nagano, Takashi;
Lubling, Yaniv;
Stevens, Tim J.;
Schoenfelder, Stefan;
Yaffe, Eitan;
Dean, Wendy;
Laue, Ernest D.;
Tanay, Amos;
Fraser, Peter

Publication type:

Article

基于Hi-c 数据的酵母染色体三维结构重构.

Published in:

Chinese Journal of Bioinformatics, 2019, v. 17, n. 3, p. 182, doi. 10.12113/j.issn.1672-5565.201812007

By:

丰继华;
牟锦;
郭亚茹

Publication type:

Article

Chromosome number and structure both are markedly stable in RER colorectal cancers and are not destabilized by mutation of p53.

Published in:

Oncogene, 1998, v. 17, n. 6, p. 719, doi. 10.1038/sj.onc.1201986

By:

Eshleman, James R;
Casey, Graham;
Kochera, Mary E;
Sedwick, W David;
Swinler, Sandra E;
Veigl, Martina L;
Willson, James KV;
Schwartz, Stuart;
Markowitz, Sanford D

Publication type:

Article

Expanding studies of chromosome structure and function in the era of T2T genomics.

Published in:

Human Molecular Genetics, 2021, v. 30, n. 20, p. R198, doi. 10.1093/hmg/ddab214

By:

Miga, Karen H;
Sullivan, Beth A

Publication type:

Article

Demonstration of the Spiral Structure of Human Chromosomes.

Published in:

Nature, 1965, v. 208, n. 5013, p. 916, doi. 10.1038/208916a0

By:

OHNUKI, YASUSHI

Publication type:

Article

Separate effects of sex hormones and sex chromosomes on brain structure and function revealed by high-resolution magnetic resonance imaging and spatial navigation assessment of the Four Core Genotype mouse model.

Published in:

Brain Structure & Function, 2016, v. 221, n. 2, p. 997, doi. 10.1007/s00429-014-0952-0

By:

Corre, Christina;
Friedel, Miriam;
Vousden, Dulcie;
Metcalf, Ariane;
Spring, Shoshana;
Qiu, Lily;
Lerch, Jason;
Palmert, Mark

Publication type:

Article

Double Structure of Chromosomes.

Published in:

Nature, 1937, v. 140, n. 3554, p. 1013, doi. 10.1038/1401013a0

By:

GATES, R. RUGGLES

Publication type:

Article

Chromosome structure modeling tools and their evaluation in bacteria.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 2, p. 1, doi. 10.1093/bib/bbae044

By:

Liu, Tong;
Qiu, Qin-Tian;
Hua, Kang-Jian;
Ma, Bin-Guang

Publication type:

Article

Surveillance of cohesin-supported chromosome structure controls meiotic progression.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18219-9

By:

Castellano-Pozo, Maikel;
Pacheco, Sarai;
Sioutas, Georgios;
Jaso-Tamame, Angel Luis;
Dore, Marian H.;
Karimi, Mohammad M.;
Martinez-Perez, Enrique

Publication type:

Article

Struktura chromosomu bakteryjnego – metody analizy oddziaływań białko-DNA in vivo.

Published in:

Advances in Hygiene & Experimental Medicine / Postepy Higieny i Medycyny Doswiadczalnej, 2017, v. 71, p. 1005, doi. 10.5604/01.3001.0010.6696

By:

Hołówka, Joanna;
Płachetka, Małgorzata

Publication type:

Article

Striking variation in chromosome structure within Musa acuminata subspecies, diploid cultivars, and F1 diploid hybrids.

Published in:

Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1387055

By:

Beránková, Denisa;
Čížková, Jana;
Majzlíková, Gabriela;
Doležalová, Alžběta;
Mduma, Hassan;
Brown, Allan;
Swennen, Rony;
Hřibová, Eva

Publication type:

Article

Characterizing the variation in chromosome structure ensembles in the context of the nuclear microenvironment.

Published in:

PLoS Computational Biology, 2022, v. 18, n. 8, p. 1, doi. 10.1371/journal.pcbi.1010392

By:

Das, Priyojit;
Shen, Tongye;
McCord, Rachel Patton

Publication type:

Article

Meiotic Chromosome Structure and Function in Plants.

Published in:

Cytogenetic & Genome Research, 2014, v. 143, n. 1-3, p. 6, doi. 10.1159/000365260

By:

Mainiero, Samantha;
Pawlowski, Wojciech P.

Publication type:

Article

A genetic algorithm with an adaptive chromosome structure for reconstruction of radome parameters using a Gaussian beam.

Published in:

Microwave & Optical Technology Letters, 2000, v. 25, n. 5, p. 323, doi. 10.1002/(SICI)1098-2760(20000605)25:5<323::AID-MOP9>3.0.CO;2-2

By:

Meng, Zhi Qi;
Takenaka, Takashi;
He, Sailing

Publication type:

Article

Chromosome structure of the wild soybean.

Published in:

Journal of Heredity, 1987, v. 78, n. 4, p. 243, doi. 10.1093/oxfordjournals.jhered.a110375

By:

Palmer, R. G.;
Newhouse, K. E.;
Graybosch, R. A.;
Delannay, X.

Publication type:

Article

Cohesin-interacting protein WAPL-1 regulates meiotic chromosome structure and cohesion by antagonizing specific cohesin complexes.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.10851

By:

Crawley, Oliver;
Barroso, Consuelo;
Testori, Sarah;
Ferrandiz, Nuria;
Silva, Nicola;
Castellano-Pozo, Maikel;
Jaso-Tamame, Angel Luis;
Martinez-Perez, Enrique

Publication type:

Article

Applications of image analysis in plant chromosome and chromatin structure study.

Published in:

Quantitative Biology, 2022, v. 10, n. 3, p. 226, doi. 10.15302/J-QB-021-0285

By:

Nobuko Ohmido;
Dwiranti, Astari;
Seiji Kato;
Kiichi Fukui

Publication type:

Article

Higher-order structure of interphase chromosomes and radiation-induced chromosomal exchange aberrations.

Published in:

International Journal of Radiation Biology, 2000, v. 76, n. 9, p. 1179, doi. 10.1080/09553000050134410

By:

Ostashevsky, J. Y.

Publication type:

Article

EVR: reconstruction of bacterial chromosome 3D structure models using error-vector resultant algorithm.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6096-0

By:

Hua, Kang-Jian;
Ma, Bin-Guang

Publication type:

Article

SCL: a lattice-based approach to infer 3D chromosome structures from single-cell Hi-C data.

Published in:

Bioinformatics, 2019, v. 35, n. 20, p. 3981, doi. 10.1093/bioinformatics/btz181

By:

Zhu, Hao;
Wang, Zheng

Publication type:

Article

Cold-induced alteration in the global structure of the male sex chromosome of In(1)B<sup>M2</sup>(reinverted) of Drosophila melanogaster is associated with increased acetylation of histone 4 at lysine 16.

Published in:

Journal of Genetics, 2008, v. 87, n. 3, p. 235, doi. 10.1007/s12041-008-0037-z

By:

KULKARNI-SHUKLA, S.;
BARGE, A. P.;
VARTAK, R. S.;
KAR, ANITA

Publication type:

Article

Inferring the global structure of chromosomes from structural variations.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/1471-2164-16-S2-S13

By:

Tomohiro Yasuda;
Satoru Miyano

Publication type:

Article

Higher-Order Structure of Human Chromosomes Observed by Electron Diffraction and Electron Tomography.

Published in:

Microscopy & Microanalysis, 2021, v. 27, n. 1, p. 149, doi. 10.1017/S1431927620024666

By:

Hayashida, Misa;
Phengchat, Rinyaporn;
Malac, Marek;
Harada, Ken;
Akashi, Tetsuya;
Ohmido, Nobuko;
Fukui, Kiichi

Publication type:

Article

Reversible Changes of Chromosome Structure upon Different Concentrations of Divalent Cations.

Published in:

Microscopy & Microanalysis, 2019, v. 25, n. 3, p. 817, doi. 10.1017/S1431927619000266

By:

Dwiranti, Astari;
Takata, Hideaki;
Fukui, Kiichi

Publication type:

Article

Combined Study of Gene Expression and Chromosome Three-Dimensional Structure in Escherichia coli During Growth Process.

Published in:

Current Microbiology, 2024, v. 81, n. 5, p. 1, doi. 10.1007/s00284-024-03640-w

By:

Zhang, Hao;
Shao, Changjun;
Wang, Jian;
Chu, Yanan;
Xiao, Jingfa;
Kang, Yu;
Zhang, Zhewen

Publication type:

Article

Maps of Constitutive-Heterochromatin Distribution for Four Martes Species (Mustelidae, Carnivora, Mammalia) Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome Structure.

Published in:

Genes, 2023, v. 14, n. 2, p. 489, doi. 10.3390/genes14020489

By:

Beklemisheva, Violetta R.;
Lemskaya, Natalya A.;
Prokopov, Dmitry Yu.;
Perelman, Polina L.;
Romanenko, Svetlana A.;
Proskuryakova, Anastasia A.;
Serdyukova, Natalya A.;
Utkin, Yaroslav A.;
Nie, Wenhui;
Ferguson-Smith, Malcolm A.;
Yang, Fentang;
Graphodatsky, Alexander S.

Publication type:

Article