Works matching DE "CANCER genes"

Results: 3784

A Pilot Study: Contrasting Genomic Profiles of Lung Adenocarcinoma Between Patients of European and Latin American Ancestry.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4865, doi. 10.3390/ijms26104865

By:

Rueda-Zarazua, Bertha;
Gutiérrez, Humberto;
García-Ortiz, Humberto;
Orozco, Lorena;
Ramírez-Martínez, Gustavo;
Jiménez-Alvarez, Luis;
Bolaños-Morales, Francina V.;
Zuñiga, Joaquín;
Ávila-Moreno, Federico;
Melendez-Zajgla, Jorge

Publication type:

Article

Germline Sequencing of Familial and Sporadic Early-Onset Colorectal Cancer: A Novel Pattern of Genes.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4672, doi. 10.3390/ijms26104672

By:

Vande Perre, Pierre;
Al Saati, Ayman;
Cabarrou, Bastien;
Plenecassagnes, Julien;
Gilhodes, Julia;
Monselet, Nils;
Lignon, Norbert;
Filleron, Thomas;
Villarzel, Carine;
Gourdain, Laure;
Selves, Janick;
Martinez, Mathilde;
Chipoulet, Edith;
Collet, Gaëlle;
Mallet, Ludovic;
Bonnet, Delphine;
Guimbaud, Rosine;
Toulas, Christine

Publication type:

Article

Analysis of Colorectal Cancer Gene Mutations and Application of Long Blocker Displacement Amplification Technology for High-Throughput Mutation Detection.

Published in:

Biosensors (2079-6374), 2025, v. 15, n. 5, p. 308, doi. 10.3390/bios15050308

By:

Lu, Ping;
Su, Xinglei;
Leong, Sirui;
Xiu, Xuehao;
Song, Ping;
Peng, Junjie;
Si, Yunpei

Publication type:

Article

Discovery and Validation of a New Biomarker Integrating Ferroptosis and Glycolysis‐Related Genes in Bladder Cancer.

Published in:

IUBMB Life, 2025, v. 77, n. 5, p. 1, doi. 10.1002/iub.70028

By:

Wang, Chenyang;
Shu, Yuncong;
Shan, Jiaqi;
Li, Kunpeng;
Wan, Shun;
Chen, Siyu;
Li, Xiaoran;
Niu, Jiping;
Yang, Li

Publication type:

Article

A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 4, p. 440, doi. 10.1038/nsmb.2516

By:

Johnsson, Per;
Ackley, Amanda;
Vidarsdottir, Linda;
Lui, Weng-Onn;
Corcoran, Martin;
Grandér, Dan;
Morris, Kevin V

Publication type:

Article

Unraveling the mechanism of BRCA2 in homologous recombination.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 7, p. 748, doi. 10.1038/nsmb.2096

By:

Holloman, William K.

Publication type:

Article

Research highlights.

Published in:

Nature Structural & Molecular Biology, 2008, v. 15, n. 6, p. 549, doi. 10.1038/nsmb0608-549

By:

Chen, Inês;
Finkelstein, Joshua M.;
Konforti, Boyana;
Lall, Sabbi

Publication type:

Article

Convergence of Mutation and Epigenetic Alterations Identifies Common Genes in Cancer That Predict for Poor Prognosis.

Published in:

PLoS Medicine, 2008, v. 5, n. 5, p. e114, doi. 10.1371/journal.pmed.0050114

By:

Chan, Timothy A.;
Glockner, Sabine;
Yi, Joo Mi;
Chen, Wei;
Neste, Leander Van;
Cope, Leslie;
Herman, James G.;
Velculescu, Victor;
Schuebel, Kornel E.;
Ahuja, Nita;
Baylin, Stephen B.

Publication type:

Article

Standing in the canine precision medicine knowledge gap: Improving annotation of canine cancer genomic biomarkers through systematic comparative analysis of human cancer mutations in COSMIC.

Published in:

Veterinary & Comparative Oncology, 2023, v. 21, n. 3, p. 482, doi. 10.1111/vco.12911

By:

Sakthikumar, Sharadha;
Facista, Salvatore;
Whitley, Derick;
Byron, Sara A.;
Ahmed, Zeeshan;
Warrier, Manisha;
Zhu, Zhanyang;
Chon, Esther;
Banovich, Kathryn;
Haworth, David;
Hendricks, William P. D.;
Wang, Guannan

Publication type:

Article

Canine Oncopanel: A capture‐based, NGS platform for evaluating the mutational landscape and detecting putative driver mutations in canine cancers.

Published in:

Veterinary & Comparative Oncology, 2022, v. 20, n. 1, p. 91, doi. 10.1111/vco.12746

By:

Wang, Guannan;
Wu, Ming;
Durham, Amy C.;
Mason, Nicola J.;
Roth, David B.

Publication type:

Article

The human and canine TERT promoters function equivalently in human and canine cells M. Arendt et al.

Published in:

Veterinary & Comparative Oncology, 2010, v. 8, n. 4, p. 310, doi. 10.1111/j.1476-5829.2010.00227.x

By:

Arendt, M. L.;
Nasir, L.;
Morgan, I. M.

Publication type:

Article

Evaluation of the gene for inducible nitric oxide synthase as a radiosensitizer under hypoxic and oxic conditions.

Published in:

Veterinary & Comparative Oncology, 2007, v. 5, n. 4, p. 250, doi. 10.1111/j.1476-5829.2007.00138.x

By:

Turek, M.;
Padilla, M.;
Argyle, David J.

Publication type:

Article

A Deeper and Wider Approach.

Published in:

Bio-IT World, 2011, v. 10, n. 1, p. 51

By:

PROFFITT, ALLISON

Publication type:

Article

Erufosine (ErPC3) Cationic Prodrugs as Dual Gene Delivery Reagents for Combined Antitumor Therapy.

Published in:

Chemistry - A European Journal, 2019, v. 25, n. 68, p. 15662, doi. 10.1002/chem.201903976

By:

Gaillard, Boris;
Seguin, Cendrine;
Remy, Jean‐Serge;
Pons, Françoise;
Lebeau, Luc

Publication type:

Article

Studying the cellular efficacy and tolerability of using CRISPR-gRNA ribonucleoprotein (RNP) complex for in-vitro knockdown of TRIB2 in acute myeloid leukaemia (AML) cells as preliminary clinical evaluations.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10487-2

By:

Tan, Josephine You Pheng;
Thevendran, Ramesh;
Quek, Yek Song;
Maheswaran, Solayappan

Publication type:

Article

The functional correlation between mir-16-5p and BIRC5 gene in colorectal cancer: integrated analysis of transcriptomics and in vitro validation.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10355-z

By:

Aslan, Elif Sibel;
Yavas, Cuneyd;
Akcali, Nermin;
Eslamkhah, Sajjad;
Meral, Gulsen;
Batur, Lutfiye Karcioglu

Publication type:

Article

Linking CDH1 SNPs to gastric cancer risk: a comprehensive analysis of rs16260, rs13689, and rs9929218.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-10094-7

By:

Aslan, Fırat;
Almalı, Necat;
Kaya, Zehra;
Güven, Mustafa;
Şahin, Elif Sena;
Özdemir, Abdulselam;
Duran, Seren;
Binici, Serhat;
Karan, Burak Muğdat;
Uygur, Serhat

Publication type:

Article

Exploring the role of interleukin 11 in cancer progression, patient survival, and therapeutic insights.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09358-z

By:

Hassani, Mahsa;
Mahdevar, Mohammad;
Peymani, Maryam

Publication type:

Article

A Japanese patient with Li-Fraumeni syndrome who had nine primary malignancies associated with a germline mutation of the p53 tumor-suppressor gene.

Published in:

International Journal of Clinical Oncology, 2008, v. 13, n. 1, p. 78, doi. 10.1007/s10147-007-0692-8

By:

Izawa, Naohiro;
Matsumoto, Seiichi;
Manabe, Jun;
Tanizawa, Taisuke;
Hoshi, Manabu;
Shigemitsu, Toshio;
Machinami, Rikuo;
Kanda, Hiroaki;
Takeuchi, Kengo;
Miki, Yoshio;
Arai, Masami;
Shirahama, Shuya;
Kawaguchi, Noriyoshi

Publication type:

Article

Detection of hotspot mutations and polymorphisms using an enhanced PCR-RFLP approach (Communicated by Graham Taylor).

Published in:

Human Mutation, 2003, v. 21, n. 5, p. 535, doi. 10.1002/humu.10184

By:

W.H. Liu;
M. Kaur;
G.M. Makrigiorgos

Publication type:

Article

Detection of hotspot mutations and polymorphisms using an enhanced PCR‐RFLP approachCommunicated by Graham Taylor.

Published in:

Human Mutation, 2003, v. 21, n. 5, p. 535, doi. 10.1002/humu.10184

By:

W.H. Liu;
M. Kaur;
G.M. Makrigiorgos

Publication type:

Article

Genetic analysis of familial colorectal cancer in Israeli ArabsCommunicated by Mark H. PaalmanOnline Citation: Human Mutation, Mutation in Brief #594 (2002) Onlinehttp://www.interscience.wiley.com/humanmutation/pdf/mutation/594.pdf.

Published in:

Human Mutation, 2003, v. 21, n. 4, p. 446, doi. 10.1002/humu.9123

By:

Rakefet Chen?Shtoyerman;
Livia Theodor;
Ester Harmati;
Eitan Friedman;
Samir Dacka;
Yael Kopelman;
Amos Sternberg;
Raz Zarivach;
Simon Bar?Meir;
Zvi Fireman

Publication type:

Article

The safety and efficacy of dabrafenib and trametinib in patients with glioma: A systematic review and meta-analysis.

Published in:

European Journal of Clinical Pharmacology, 2024, v. 80, n. 5, p. 639, doi. 10.1007/s00228-024-03635-3

By:

Habibi, Mohammad Amin;
Mirjani, Mohammad Sina;
Ahmadvand, Muhammad Hussain;
Delbari, Pouria;
Alasti, Omid

Publication type:

Article

CRISPR screening and cell line IC50 data reveal novel key genes for trametinib resistance.

Published in:

Clinical & Experimental Medicine, 2024, v. 25, n. 1, p. 1, doi. 10.1007/s10238-024-01538-2

By:

Liu, Hengrui;
Wang, Panpan

Publication type:

Article

Involvement of non-coding RNAs and transcription factors in the induction of Transglutaminase isoforms by ATRA.

Published in:

Amino Acids, 2019, v. 51, n. 9, p. 1273, doi. 10.1007/s00726-019-02766-7

By:

Franzese, Ornella;
Minotti, Linda;
Aguiari, Gianluca;
Corrà, Fabio;
Cervellati, Carlo;
Ferrari, Carlo;
Volinia, Stefano;
Bergamini, Carlo M.;
Bianchi, Nicoletta

Publication type:

Article

Recognition of Cancer Mediating Genes using the Novel Restricted Boltzmann Machines.

Published in:

Wireless Personal Communications, 2024, v. 138, n. 4, p. 2275, doi. 10.1007/s11277-024-11600-7

By:

Sheet, Sougata;
Ghosh, Anupam;
Ghosh, Ranjan;
Chakrabarti, Amlan

Publication type:

Article

DM-BLD: differential methylation detection using a hierarchical Bayesian model exploiting local dependency.

Published in:

Bioinformatics, 2017, v. 33, n. 2, p. 161, doi. 10.1093/bioinformatics/btw596

By:

Xiao Wang;
Jinghua Gu;
Hilakivi-Clarke, Leena;
Clarke, Robert;
Jianhua Xuan

Publication type:

Article

Large-scale inference of conjunctive Bayesian networks.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i727, doi. 10.1093/bioinformatics/btw459

By:

Montazeri, Hesam;
Kuipers, Jack;
Kouyos, Roger;
Böni, Jürg;
Yerly, Sabine;
Klimkait, Thomas;
Aubert, Vincent;
Günthard, Huldrych F.;
Beerenwinkel, Niko

Publication type:

Article

A weighted exact test for mutually exclusive mutations in cancer.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i736, doi. 10.1093/bioinformatics/btw462

By:

Leiserson, Mark D. M.;
Reyna, Matthew A.;
Raphael, Benjamin J.

Publication type:

Article

lnCaNet: pan-cancer co-expression network for human lncRNA and cancer genes.

Published in:

Bioinformatics, 2016, v. 32, n. 10, p. 1595, doi. 10.1093/bioinformatics/btw017

By:

Yining Liu;
Min Zhao

Publication type:

Article

SV-Bay: structural variant detection in cancer genomes using a Bayesian approach with correction for GC-content and read mappability.

Published in:

Bioinformatics, 2016, v. 32, n. 7, p. 984, doi. 10.1093/bioinformatics/btv751

By:

Iakovishina, Daria;
Janoueix-Lerosey, Isabelle;
Barillot, Emmanuel;
Regnier, Mireille;
Boeva, Valentina

Publication type:

Article

Statistically identifying tumor suppressors and oncogenes from pan-cancer genome-sequencing data.

Published in:

Bioinformatics, 2015, v. 31, n. 22, p. 3561, doi. 10.1093/bioinformatics/btv430

By:

Kumar, Runjun D.;
Searleman, Adam C.;
Swamidass, S. Joshua;
Griffith, Obi L.;
Bose, Ron

Publication type:

Article

Snowball: resampling combined with distance-based regression to discover transcriptional consequences of a driver mutation.

Published in:

Bioinformatics, 2015, v. 31, n. 1, p. 84, doi. 10.1093/bioinformatics/btu603

By:

Xu, Yaomin;
Guo, Xingyi;
Sun, Jiayang;
Zhao, Zhongming

Publication type:

Article

Genomon ITDetector: a tool for somatic internal tandem duplication detection from cancer genome sequencing data.

Published in:

Bioinformatics, 2015, v. 31, n. 1, p. 116, doi. 10.1093/bioinformatics/btu593

By:

Chiba, Kenichi;
Shiraishi, Yuichi;
Nagata, Yasunobu;
Yoshida, Kenichi;
Imoto, Seiya;
Ogawa, Seishi;
Miyano, Satoru

Publication type:

Article

Fast randomization of large genomic datasets while preserving alteration counts.

Published in:

Bioinformatics, 2014, v. 30, n. 17, p. i617, doi. 10.1093/bioinformatics/btu474

By:

Gobbi, Andrea;
Iorio, Francesco;
Dawson, Kevin J.;
Wedge, David C.;
Tamborero, David;
Alexandrov, Ludmil B.;
Lopez-Bigas, Nuria;
Garnett, Mathew J.;
Jurman, Giuseppe;
Saez-Rodriguez, Julio

Publication type:

Article

ContrastRank: a new method for ranking putative cancer driver genes and classification of tumor samples.

Published in:

2014

By:

Tian, Rui;
Basu, Malay K.;
Capriotti, Emidio

Publication type:

Product Review

OncodriveROLE classifies cancer driver genes in loss of function and activating mode of action.

Published in:

Bioinformatics, 2014, v. 30, n. 17, p. i549, doi. 10.1093/bioinformatics/btu467

By:

Schroeder, Michael P.;
Rubio-Perez, Carlota;
Tamborero, David;
Gonzalez-Perez, Abel;
Lopez-Bigas, Nuria

Publication type:

Article

CGARS: cancer genome analysis by rank sums.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1295, doi. 10.1093/bioinformatics/btu011

By:

Lu, Xin;
Thomas, Roman K.;
Peifer, Martin

Publication type:

Article

Subclonal variant calling with multiple samples and prior knowledge.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1198, doi. 10.1093/bioinformatics/btt750

By:

Gerstung, Moritz;
Papaemmanuil, Elli;
Campbell, Peter J.

Publication type:

Article

OncodriveCLUST: exploiting the positional clustering of somatic mutations to identify cancer genes.

Published in:

Bioinformatics, 2013, v. 29, n. 18, p. 2238, doi. 10.1093/bioinformatics/btt395

By:

Tamborero, David;
Gonzalez-Perez, Abel;
Lopez-Bigas, Nuria

Publication type:

Article

In silico identification of oncogenic potential of fyn-related kinase in hepatocellular carcinoma.

Published in:

Bioinformatics, 2013, v. 29, n. 4, p. 420, doi. 10.1093/bioinformatics/bts715

By:

Chen, Jia-Shing;
Hung, Wei-Shiang;
Chan, Hsiang-Han;
Tsai, Shaw-Jenq;
Sun, H. Sunny

Publication type:

Article

integIRTy: a method to identify genes altered in cancer by accounting for multiple mechanisms of regulation using item response theory.

Published in:

Bioinformatics, 2012, v. 28, n. 22, p. 2861, doi. 10.1093/bioinformatics/bts561

By:

Tong, Pan;
Coombes, Kevin R.

Publication type:

Article

Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data.

Published in:

Bioinformatics, 2012, v. 28, n. 1, p. 40, doi. 10.1093/bioinformatics/btr593

By:

Gusnanto, Arief;
Wood, Henry M.;
Pawitan, Yudi;
Rabbitts, Pamela;
Berri, Stefano

Publication type:

Article

PathScan: a tool for discerning mutational significance in groups of putative cancer genes.

Published in:

Bioinformatics, 2011, v. 27, n. 12, p. 1595, doi. 10.1093/bioinformatics/btr193

By:

Wendl, Michael C.;
Wallis, John W.;
Lin, Ling;
Kandoth, Cyriac;
Mardis, Elaine R.;
Wilson, Richard K.;
Ding, Li

Publication type:

Article

Identifying viral integration sites using SeqMap 2.0.

Published in:

Bioinformatics, 2011, v. 27, n. 5, p. 720, doi. 10.1093/bioinformatics/btq722

By:

Hawkins, Troy B.;
Dantzer, Jessica;
Peters, Brandon;
Dinauer, Mary;
Mockaitis, Keithanne;
Mooney, Sean;
Cornetta, Kenneth

Publication type:

Article

CNAnova: a new approach for finding recurrent copy number abnormalities in cancer SNP microarray data.

Published in:

Bioinformatics, 2010, v. 26, n. 11, p. 1395, doi. 10.1093/bioinformatics/btq145

By:

Ivakhno, Sergii;
Tavaré, Simon

Publication type:

Article

CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms.

Published in:

Bioinformatics, 2008, v. 24, n. 7, p. 1014, doi. 10.1093/bioinformatics/btn067

By:

Weil Lai;
Vidhu Choudhary;
Peter J. Park

Publication type:

Article

Co-occurrence analysis of insertional mutagenesis data reveals cooperating oncogenes.

Published in:

Bioinformatics, 2007, v. 23, n. 13, p. i133, doi. 10.1093/bioinformatics/btm202

By:

Jeroen de Ridder;
Jaap Kool;
Anthony Uren;
Jan Bot;
Lodewyk Wessels;
Marcel Reinders

Publication type:

Article

The Act of Diminishing the RTRAF Expression in Benign Thyroid Tissues Represents a Potential Method for Impeding the Progression of Malignancy in Cells.

Published in:

Jentashapir Journal of Cellular & Molecular Biology, 2023, v. 14, n. 3, p. 1, doi. 10.5812/jjcmb-138094

By:

Esfandiarpour, Ghazal;
Javadirad, Seyed-Morteza;
Kolahduzan, Mohsen

Publication type:

Article

胰腺癌吉西他滨化疗耐药生物标志物— INPP4B的探索性研究.

Published in:

China Oncology, 2024, v. 34, n. 12, p. 1090, doi. 10.19401/j.cnki.1007-3639.2024.12.003

By:

任加强;
武帅;
苏童;
李杰;
韩亮;
仵正

Publication type:

Article