Works matching DE "GENETIC barcoding"

Results: 5000

Extending monitoring with sediment archive approaches: Comparison of biomonitoring, metabarcoding, and biomarkers to assess past phytoplankton dynamics.

Published in:

Limnology & Oceanography, Methods, 2025, v. 23, n. 8, p. 578, doi. 10.1002/lom3.10694

By:

Romahn, Juliane;
Schmidt, Alexandra;
Kaiser, Jérôme;
Baranski, Damian;
Arz, Helge W.;
Epp, Laura S.;
Kremp, Anke;
Bálint, Miklós

Publication type:

Article

DNA metabarcoding of biocrust lichen-forming fungi detects responses to disturbance and invasion.

Published in:

Bryologist, 2025, v. 128, n. 1, p. 1, doi. 10.1639/0007-2745-128.1.001

By:

Root, Heather T.;
McCune, Bruce;
Pyke, David A.;
Leavitt, Steven D.

Publication type:

Article

The phylogeny and systematics of the Costellariidae (Caenogastropoda: Turbinelloidea) revisited.

Published in:

Invertebrate Systematics, 2025, v. 39, n. 7, p. 1, doi. 10.1071/IS24101

By:

Fedosov, Alexander;
Bouchet, Philippe;
Dekkers, Aart;
Gori, Sandro;
Huang, Shih-I;
Kantor, Yuri;
Lemarcis, Thomas;
Marrow, Maxwell;
Ratti, Claudia;
Rosenberg, Gary;
Salisbury, Richard;
Zvonareva, Sofia;
Puillandre, Nicolas

Publication type:

Article

Calycina lobariae , a new combination incorporating Chalara lobariae and Calycina alstrupii.

Published in:

Lichenologist, 2025, v. 57, n. 3/4, p. 187, doi. 10.1017/S0024282925101047

By:

Suija, Ave;
Jonsson, Fredrik

Publication type:

Article

Editorial: Expanding insights into structure, function, and disorder of genome by the power of artificial intelligence in bioinformatics.

Published in:

2025

By:

Lyu, Hongqiang;
Li, Yao;
Wu, Sijia;
Fu, Laiyi;
Liang, Xiaoping;
Liu, Erhu

Publication type:

Editorial

DNA Barcoding of Galápagos macroalgae from marine iguana foraging grounds: updated species checklist with new occurrences of Rhodophyta for the archipelago.

Published in:

Marine Biology, 2025, v. 172, n. 8, p. 1, doi. 10.1007/s00227-025-04688-3

By:

Dalgo, Denisse;
Anslan, Sten;
Eccarius, Anna;
Guayasamin, Juan M.;
Steinfartz, Sebastian

Publication type:

Article

Desmodium molliculum (Kunth) DC., an Andean medicinal plant: DNA barcoding and HPLC fingerprint for species discrimination and evaluation of its pharmacological potential.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1612556

By:

Peñaherrera, Eugenia;
Sarmiento-Pacurucu, Josue;
Santos-Ordóñez, Efrén;
Kachatryan, Alexandr;
Cuzco, Nancy;
Vanegas, David;
Calle-López, Jessica;
Villao-Uzho, Liliana;
Heyden, Yvan Vander;
Wilches, Isabel;
León-Tamariz, Fabián

Publication type:

Article

Unravelling Artemisia species genetic variation via DNA barcoding, ISSR and RAPD with the development of eco-specific SCAR markers.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-07058-9

By:

Mahgoub, Yasmin A.;
Mahmoud, Hebaalla A.;
El-Sebakhy, Nadia A.;
Abdallah, Ingy I.

Publication type:

Article

Development of DNA Barcoding Signatures for Pink Bollworm in Cotton Ecosystem Based on the Mitochondrial COI Gene.

Published in:

Agricultural Science Digest, 2025, v. 45, n. 3, p. 460, doi. 10.18805/ag.D-5765

By:

Shree, Padma;
Muthuswami, M.;
Boopathi, N. Manikanda;
Senguttuvan, K.;
Rajeswar, S.

Publication type:

Article

Molecular Characterization of Water Rattan Palm (Calamus angustifolius Griff.) from Kampar River, Riau Province, Indonesia Using matK and trnL-trnL-trnF Intergenic Spacer.

Published in:

Jordan Journal of Biological Sciences, 2025, v. 18, n. 2, p. 253, doi. 10.54319/jjbs/180206

By:

Al Khairi, Hapiz;
Roslim, Dewi Indriyani;
Vitovang, Aristyanti Devie;
Hariani, Meisita;
Herman;
Lestari, Wahyu;
Adiwirman;
Wansyah Hasibuan, Aldy Riau;
Novita, Linda;
Zulaeha, Siti;
Hindaningrum, Irni Furnawanthi

Publication type:

Article

Re-description of Clubiona huaban (Araneae, Clubionidae), with the first description of the female.

Published in:

Biodiversity Data Journal, 2025, p. 1, doi. 10.3897/BDJ.13.e157384

By:

Zhang, Jianshuang;
Du, Qiwen;
Dai, Yingchen;
Yu, Hao

Publication type:

Article

Dataset of Grey plover (Pluvialis squatarola) diet composition on the SW Black Sea coast using DNA metabarcoding.

Published in:

Biodiversity Data Journal, 2025, p. 1, doi. 10.3897/BDJ.13.e150802

By:

Vassileva, Liliana V.;
Lozanova, Lyudmila;
Marinov, Martin;
Morinière, Jérôme;
Neov, Boyko;
Nikolov, Boris;
Simov, Nikolay;
Klayn, Stefania

Publication type:

Article

Sources of uncertainty in DNA metabarcoding of whole communities: Implications for its use in biomonitoring.

Published in:

Methods in Ecology & Evolution, 2025, v. 16, n. 8, p. 1658, doi. 10.1111/2041-210X.70093

By:

Jones, J. Iwan;
Arnold, Amanda;
Buchner, Dominik;
Murphy, John F.;
Childress, Jasmine N.;
Beja, Pedro;
Altermatt, Florian;
Meissner, Kristian;
Adams, Ian;
Anderson, Meri;
Borrell, Yaisel J.;
Briscoe, Andrew G.;
Bruce, Kat;
Chaves, Cátia;
Conyers, Chris;
Deiner, Kristy;
Elbrecht, Vasco;
Fueyo, Álvaro;
Goodall, Tim;
Granero‐Castro, Javier

Publication type:

Article

Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databases.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11917-y

By:

Winand, Raf;
D'hooge, Elizabet;
Van Uffelen, Alexander;
Bogaerts, Bert;
Van Braekel, Julien;
Hoffman, Stefan;
Roosens, Nancy H. C. J.;
Becker, Pierre;
De Keersmaecker, Sigrid C. J.;
Vanneste, Kevin

Publication type:

Article

Cataloguing biodiversity of freshwater communities in two lakes of Gadchiroli area of central India using environmental DNA analysis.

Published in:

Journal of Threatened Taxa, 2025, v. 17, n. 7, p. 27195, doi. 10.11609/jott.9540.17.7.27195-27206

By:

Seelamwar, Maheshkumar;
Chavan, Pankaj;
Paingankar, Mandar S.

Publication type:

Article

Nationwide investigation of eukaryotic pathogens in ticks from cattle and sheep in Kyrgyzstan using metabarcoding.

Published in:

PLoS ONE, 2025, v. 20, n. 8, p. 1, doi. 10.1371/journal.pone.0327953

By:

Oh, Singeun;
Amvongo-Adjia, Nathalie;
Kim, Hyun Jung;
Choi, Jun Ho;
Chavarria, Xavier;
Yi, Myung-hee;
Shatta, Arwa;
Aknazarov, Bekbolsun;
Kim, Ju Yeong;
Ju, Jung-Won

Publication type:

Article

The Fall of Icarus: X-ray μCT assisted dissection of the rarely collected, montane genus Nipponosphadasmus (Curculionidae: Conoderitae) reveals highly atypical flightlessness in the supertribe Free.

Published in:

Insect Systematics & Diversity, 2025, v. 9, n. 3, p. 1, doi. 10.1093/isd/ixaf012

By:

Lewis, Jake H;
Kojima, Hiroaki;
Anzaldo, Salvatore S;
Fujisawa, Yusuke

Publication type:

Article

Do morphologically defined groups correspond to reproductively isolated species? A case study in Myrmica ants from Switzerland Open Access.

Published in:

Insect Systematics & Diversity, 2025, v. 9, n. 3, p. 1, doi. 10.1093/isd/ixaf021

By:

Lavanchy, Guillaume;
Galkowski, Christophe;
Jecha, Kristine;
Freitag, Anne;
Avril, Amaury;
Dépraz, Aline;
Schwander, Tanja

Publication type:

Article

Expanded phylogeny of Nomadinae (Hymenoptera: Apidae) with integration of UCE and DNA barcode sequence data Open Access.

Published in:

Insect Systematics & Diversity, 2025, v. 9, n. 3, p. 1, doi. 10.1093/isd/ixaf011

By:

Sless, Trevor J L;
Odanaka, Katherine A;
Alva-Caballero, L Ximena;
Searle, Jeremy B;
Danforth, Bryan N;
Rehan, Sandra M

Publication type:

Article

Exploring Ant (Hymenoptera, Formicidae) Species Diversity in the Gongga Mountain, China.

Published in:

Transactions of the American Entomological Society, 2025, v. 151, n. 1, p. 61, doi. 10.3157/061.151.0105

By:

Wu, Yanping;
Chen, Zhilin;
Li, Ying;
Wang, Yu;
Du, Congcong

Publication type:

Article

Changes in Microbial Community Assemblages Due To Urban Pollution, Detected via rRNA Gene Amplicon Sequencing in the Magdalena River, Mexico City.

Published in:

Microbial Ecology, 2025, v. 88, n. 1, p. 1, doi. 10.1007/s00248-025-02580-7

By:

Cruz-Cano, R.;
Bretón-Deval, L.;
Martínez-García, M.;
Díaz-Jaimes, P.;
Kolb, M.

Publication type:

Article

Harnessing eDNA technology to identify fish diversity and distribution in the Kashi River, a tributary of the Ili River, Xinjiang, China.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-14079-9

By:

Niu, Jiangong;
Jia, Hui;
Zhang, Tao;
Hu, Jiangwei;
Huang, Liuyi;
Zhang, Hui

Publication type:

Article

Comparative chloroplast genome analysis reveals powerful barcodes for combatting illegal logging of CITES-listed threatened Asian rosewoods (Dalbergia, Leguminosae, Papilionoideae) Open Access.

Published in:

Botanical Journal of the Linnean Society, 2025, v. 208, n. 4, p. 347, doi. 10.1093/botlinnean/boae086

By:

Rather, Shabir A;
Wang, Kaikai;
Wang, Ting;
Liu, Hongmei;
Schneider, Harald

Publication type:

Article

Organic farming fosters arthropod diversity of specific insect guilds – evidence from metabarcoding.

Published in:

Conservation Genetics, 2025, v. 26, n. 4, p. 847, doi. 10.1007/s10592-025-01707-0

By:

Habel, Jan Christian;
Ulrich, Werner;
Segerer, Andreas H.;
Greifenstein, Thomas;
Knubben, Johannes;
Morinière, Jerôme;
Günter, Armin;
Schmitt, Thomas;
Hausmann, Axel

Publication type:

Article

Thrips fauna on mountainous regions in Taiwan Island, with description of a new species from montane areas, Thrips hehuanshanensis sp. nov. (Thysanoptera, Thripidae).

Published in:

Taiwania, 2025, v. 70, n. 3, p. 389, doi. 10.6165/tai.2025.70.389

By:

BOONMEE, Watchalawalee;
Wen-Bin YEH

Publication type:

Article

Modular DNA barcoding of nanobodies enables multiplexed in situ protein imaging and high-throughput biomolecule detection.

Published in:

eLife, 2025, p. 1, doi. 10.7554/eLife.105225

By:

Shilin Zhong;
Ruiyu Wang;
Xinwei Gao;
Qingchun Guo;
Rui Lin;
Minmin Luo

Publication type:

Article

Concurrent DNA meta‐barcoding and plankton imaging reveal novel parasitic infection and competition in a diatom.

Published in:

Limnology & Oceanography, 2025, v. 70, p. S86, doi. 10.1002/lno.12629

By:

Catlett, Dylan;
Peacock, Emily E.;
Fontaine, Diana N.;
Taylor Crockford, E.;
McKenzie, Mary J.;
Rynearson, Tatiana A.;
Sosik, Heidi M.

Publication type:

Article

SEQUENCING ANALYSIS OF SIX INTERGENIC SPACER SEQUENCES OF IRAQI TAMARIX L. GENUS (TAMARICACEAE).

Published in:

SABRAO Journal of Breeding & Genetics, 2025, v. 57, n. 3, p. 1081, doi. 10.54910/sabrao2025.57.3.20

By:

ALANBARI, A. K.;
AL-TAIE, A. T.;
AL-RAWI, A. A.;
AL-HADEETHI, M. A.

Publication type:

Article

EVALUATION OF THE MAMAN PLANT FROM RIAU WITH RBCL, ITS, AND THEIR COMBINATION AS DNA BARCODES.

Published in:

SABRAO Journal of Breeding & Genetics, 2025, v. 57, n. 3, p. 1070, doi. 10.54910/sabrao2025.57.3.19

By:

ROSLIM, D. I.;
FAUZAN, M.;
TAUFIK, M. E.;
AL KHAIRI, H.;
HERMAN;
SAFARRIDA, A.;
LESTARI, W.;
SOFIYANTI, N.;
EFFENDI, A.;
NOVITA, L.;
RENINTA, R.;
ALTUHAISH, A. A. F.

Publication type:

Article

Exploration of Multi-Gene DNA Barcode Markers to Reveal the Broad Genetic Diversity of Field Ticks (Acari: Ixodidae) in a Tropical Environment of Hainan Island, China.

Published in:

Cytogenetic & Genome Research, 2023, v. 163, n. 1/2, p. 59, doi. 10.1159/000531734

By:

Lu, Yajun;
Zhao, Yae;
Hu, Li;
Zhang, Wanyu;
Xie, Yunyun;
Cheng, Shi;
Zheng, Bin;
Xia, Qianfeng

Publication type:

Article

New Comparative Cytogenetic Data on Three Genera of Armored Catfishes of Ancistrini (Loricariidae: Hypostominae).

Published in:

Cytogenetic & Genome Research, 2019, v. 159, n. 4, p. 208, doi. 10.1159/000504723

By:

Mariotto, Sandra;
Centofante, Liano;
Venere, Paulo C.;
Ferreira, Daniela C.;
artoni, Roberto F.

Publication type:

Article

Pinibarreniales, a new order of Sordariomycetes from pine barrens ecosystem.

Published in:

Mycologia, 2024, v. 116, n. 5, p. 835, doi. 10.1080/00275514.2024.2363084

By:

Luo, Jing;
Walsh, Emily;
Faulborn, Alexis;
Gao, Kevin;
White, James;
Zhang, Ning

Publication type:

Article

Larger presence of ectomycorrhizae detected from pygmy pine ecotype in the fire-frequent pine barrens ecosystem.

Published in:

Mycologia, 2023, v. 115, n. 5, p. 602, doi. 10.1080/00275514.2023.2234269

By:

Luo, Jing;
Walsh, Emily;
Groben, Glen;
Justiniano, Brandon;
Zhang, Ning

Publication type:

Article

Inclusion of database outgroups reduces false positives in fungal metabarcoding taxonomic assignments.

Published in:

Mycologia, 2023, v. 115, n. 4, p. 571, doi. 10.1080/00275514.2023.2206931

By:

Rawson, Clayton;
Zahn, Geoffrey

Publication type:

Article

Along the footpath of Penicillium discovery: Six new species from the Woodville Big Tree Forest Trail.

Published in:

Mycologia, 2023, v. 115, n. 1, p. 87, doi. 10.1080/00275514.2022.2135915

By:

Visagie, Cobus M.;
Yilmaz, Neriman

Publication type:

Article

Delimitation and phylogeny of Dictyochaeta, and introduction of Achrochaeta and Tubulicolla, genera nova.

Published in:

Mycologia, 2021, v. 113, n. 2, p. 390, doi. 10.1080/00275514.2020.1822095

By:

Réblová, Martina;
Nekvindová, Jana;
Kolařík, Miroslav;
Hernández-Restrepo, Margarita

Publication type:

Article

New species of Cortinarius sect. Austroamericani, sect. nov., from South American Nothofagaceae forests.

Published in:

Mycologia, 2018, v. 110, n. 6, p. 1127, doi. 10.1080/00275514.2018.1515449

By:

San-Fabian, Beatriz;
Niskanen, Tuula;
Liimatainen, Kare;
Kooij, Pepijn W.;
Mujic, Alija B.;
Truong, Camille;
Peintner, Ursula;
Dresch, Philipp;
Nouhra, Eduardo;
Matheny, P. Brandon;
Smith, Matthew E.

Publication type:

Article

Intragenomic nuclear RNA variation in a cryptic Amanita taxon.

Published in:

Mycologia, 2018, v. 110, n. 1, p. 93, doi. 10.1080/00275514.2018.1427402

By:

Hughes, Karen W.;
Tulloss, Rodham H.;
Petersen, Ronald H.

Publication type:

Article

Vanilla authenticity control by DNA barcoding and isotope data aggregation.

Published in:

Flavour & Fragrance Journal, 2017, v. 32, n. 4, p. 228, doi. 10.1002/ffj.3379

By:

Geißler, Katrin;
Greule, Markus;
Schäfer, Uwe;
Hans, Joachim;
Geißler, Torsten;
Meier, Lars;
Keppler, Frank;
Krammer, Gerhard

Publication type:

Article

Metabarcoding inventory of an arctic tundra soil ecosystem reveals highly heterogeneous communities at a small scale.

Published in:

Polar Biology, 2023, v. 46, n. 5, p. 461, doi. 10.1007/s00300-023-03131-x

By:

Jorna, Jesse;
Vandenbrink, Bryan;
Hogg, Ian D.;
Wall, Diana H.;
Adams, Byron J.

Publication type:

Article

DNA barcoding reveals hidden nemertean diversity from the marine protected area Namuncurá–Burdwood Bank, Southwestern Atlantic.

Published in:

Polar Biology, 2023, v. 46, n. 3, p. 215, doi. 10.1007/s00300-023-03117-9

By:

Alfaya, José E. F.;
Lozada, Mariana;
Bigatti, Gregorio

Publication type:

Article

DNA metabarcoding data reveals harmful algal-bloom species undescribed previously at the northern Antarctic Peninsula region.

Published in:

Polar Biology, 2022, v. 45, n. 9, p. 1495, doi. 10.1007/s00300-022-03084-7

By:

Liu, Chenlin;
Zhang, Xuelei;
Wang, Xiuliang

Publication type:

Article

Fungal diversity in seasonal snow of Martel Inlet, King George Island, South Shetland Islands, assessed using DNA metabarcoding.

Published in:

Polar Biology, 2022, v. 45, n. 4, p. 627, doi. 10.1007/s00300-022-03014-7

By:

Rosa, Luiz Henrique;
de Menezes, Graciéle Cunha Alves;
Pinto, Otávio Henrique Bezerra;
Convey, Peter;
Carvalho-Silva, Micheline;
Simões, Jefferson Cardia;
Rosa, Carlos Augusto;
Câmara, Paulo Eduardo Aguiar Saraiva

Publication type:

Article

Contrasting variation patterns in Austroplaca hookeri and Rusavskia elegans (Teloschistaceae, lichenized Ascomycota) in maritime Antarctica.

Published in:

Polar Biology, 2022, v. 45, n. 1, p. 101, doi. 10.1007/s00300-021-02976-4

By:

Scur, Mayara Camila;
Kitaura, Marcos Junji;
de Paula, Julia Bianchi;
Spielmann, Adriano Afonso;
Lorenz, Aline Pedroso

Publication type:

Article

Taxonomic and genetic confirmed findings of snow crab (Chionoecetes opilio) larvae in the Barents Sea.

Published in:

Polar Biology, 2021, v. 44, n. 11, p. 2107, doi. 10.1007/s00300-021-02946-w

By:

Hjelset, Ann Merete;
Danielsen, Hanna Ellerine Helle;
Westgaard, Jon-Ivar;
Agnalt, Ann-Lisbeth

Publication type:

Article

Oceanographic influence on the early life-history stages of benthic invertebrates during the polar night.

Published in:

Polar Biology, 2021, v. 44, n. 9, p. 1781, doi. 10.1007/s00300-021-02918-0

By:

Meyer-Kaiser, Kirstin;
Chen, Hongju;
Liu, Xiaoshou;
Laney, Samuel R.

Publication type:

Article

Early detection of marine non-indigenous species on Svalbard by DNA metabarcoding of sediment.

Published in:

Polar Biology, 2021, v. 44, n. 4, p. 653, doi. 10.1007/s00300-021-02822-7

By:

van den Heuvel-Greve, Martine J.;
van den Brink, Anneke M.;
Glorius, Sander T.;
de Groot, G. Arjen;
Laros, Ivo;
Renaud, Paul E.;
Pettersen, Ragnhild;
Węsławski, Jan Marcin;
Kuklinski, Piotr;
Murk, Albertinka J.

Publication type:

Article

Differences in diversity and photoprotection capability between ice algae and under-ice phytoplankton in Saroma-Ko Lagoon, Japan: a comparative taxonomic diatom analysis with microscopy and DNA barcoding.

Published in:

Polar Biology, 2020, v. 43, n. 11, p. 1873, doi. 10.1007/s00300-020-02751-x

By:

Yoshida, Kazuhiro;
Hattori, Hiroshi;
Toyota, Takenobu;
McMinn, Andrew;
Suzuki, Koji

Publication type:

Article

DNA barcoding of the marine macroalgae from Nome, Alaska (Northern Bering Sea) reveals many trans-Arctic species.

Published in:

Polar Biology, 2019, v. 42, n. 5, p. 851, doi. 10.1007/s00300-019-02478-4

By:

Bringloe, Trevor T.;
Saunders, Gary W.

Publication type:

Article

Trichophoromyia auraensis: evidence for cryptic species and first record in the state of Maranhão, Brazil.

Published in:

Parasitology Research, 2023, v. 122, n. 12, p. 2933, doi. 10.1007/s00436-023-07982-5

By:

Rodrigues, Bruno Leite;
Brilhante, Andreia Fernandes;
de Souza Pinto, Israel;
Galati, Eunice Aparecida Bianchi

Publication type:

Article