Works matching Chloroplast genes

Results: 3394

Motif analysis unveils the possible co-regulation of chloroplast genes and nuclear genes encoding chloroplast proteins.

Published in:

Plant Molecular Biology, 2012, v. 80, n. 2, p. 177, doi. 10.1007/s11103-012-9938-6

By:

Wang, Ying;
Ding, Jun;
Daniell, Henry;
Hu, Haiyan;
Li, Xiaoman

Publication type:

Article

OsPRDA1 Interacts With OsFSD2 To Promote Chloroplast Development by Regulating Chloroplast Gene Expression in Rice.

Published in:

Rice (19398425), 2025, v. 18, n. 1, p. 1, doi. 10.1186/s12284-025-00771-x

By:

Zhang, Chao;
Wang, Lengjing;
Wang, Zirui;
Dai, Qiang;
Feng, Haiyang;
Xu, Shu;
Liu, Xueju;
Tang, Jiaqi;
Yu, Hengxiu

Publication type:

Article

Chloroplast genes reveal hybridity in mango (Mangifera indica L.).

Published in:

Journal of Applied Horticulture, 2018, v. 20, n. 1, p. 57, doi. 10.37855/jah.2018.v20i01.10

By:

Muthukumar, M.;
Bajpai, Anju;
Rajan, S.

Publication type:

Article

Analysis of codon usage bias of chloroplast genes in Oryza species.

Published in:

Planta: An International Journal of Plant Biology, 2020, v. 252, n. 4, p. 1, doi. 10.1007/s00425-020-03470-7

By:

Chakraborty, Supriyo;
Yengkhom, Sophiarani;
Uddin, Arif

Publication type:

Article

Auxin promotes chloroplast division by increasing the expression of chloroplast division genes.

Published in:

Plant Cell Reports, 2025, v. 44, n. 1, p. 1, doi. 10.1007/s00299-024-03415-4

By:

Wang, Yixuan;
Zhou, Zhongyang;
Liu, Xiaomin

Publication type:

Article

Mutation pressure and natural selection on codon usage in chloroplast genes of two species in Pisum L. (Fabaceae: Faboideae).

Published in:

Mitochondrial DNA. Part A, 2019, v. 30, n. 4, p. 664, doi. 10.1080/24701394.2019.1616701

By:

Bhattacharyya, Debjyoti;
Uddin, Arif;
Das, Sudipa;
Chakraborty, Supriyo

Publication type:

Article

Full-length transcriptome analysis of Ophioglossum vulgatum: effects of experimentally identified chloroplast gene clusters on expression and evolutionary patterns.

Published in:

Plant Molecular Biology, 2024, v. 114, n. 2, p. 1, doi. 10.1007/s11103-024-01423-2

By:

Hao, Jing;
Liang, Yingyi;
Ping, Jingyao;
Wang, Ting;
Su, Yingjuan

Publication type:

Article

Horizontal Gene Transfer Involving Chloroplasts.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 9, p. 4484, doi. 10.3390/ijms22094484

By:

Filip, Ewa;
Skuza, Lidia;
Kobayashi, Koichi

Publication type:

Article

The Role of Chloroplast Gene Expression in Plant Responses to Environmental Stress.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 17, p. 6082, doi. 10.3390/ijms21176082

By:

Zhang, Yi;
Zhang, Aihong;
Li, Xiuming;
Lu, Congming

Publication type:

Article

Sigma factor 1 in chloroplast gene transcription and photosynthetic light acclimation.

Published in:

Journal of Experimental Botany, 2020, v. 71, n. 3, p. 1029, doi. 10.1093/jxb/erz464

By:

Macadlo, Lauren A;
Ibrahim, Iskander M;
Puthiyaveetil, Sujith

Publication type:

Article

An intermolecular disulfide-based light switch for chloroplast psbD gene expression in Chlamydomonas reinhardtii.

Published in:

Plant Journal, 2012, v. 72, n. 3, p. 378, doi. 10.1111/j.1365-313X.2012.05083.x

By:

Schwarz, Christian;
Bohne, Alexandra-Viola;
Wang, Fei;
Cejudo, Francisco Javier;
Nickelsen, Jörg

Publication type:

Article

Study of phylogenetic relationships of different species of Satureja spp. based on nuclear ITS region and chloroplast matK gene.

Published in:

Iranian Journal of Rangelands & Forests Plant Breeding & Genetic Research, 2021, v. 28, n. 2, p. 173, doi. 10.22092/ijrfpbgr.2019.127263.1352

By:

Moaied, F. Noormand;
Bihamta, M. R.;
Aghdaei, S. R. Tabaei;
Naghavi, M. R.

Publication type:

Article

INCLUSION OF CHLOROPLAST GENES THAT HAVE UNDERGONE EXPANSION MISLEADS PHYLOGENETIC RECONSTRUCTION IN THE CHLOROPHYTA.

Published in:

American Journal of Botany, 2013, v. 100, n. 11, p. 2194, doi. 10.3732/ajb.1200584

By:

Novis, Phil M.;
Smissen, Rob;
Buckley, Thomas R.;
Gopalakrishnan, Kishore;
Visnovsky, Gabriel

Publication type:

Article

Molecular systematics of the genus Astragalus L. (Fabaceae): Phylogenetic analyses of nuclear ribosomal DNA internal transcribed spacers and chloroplast gene ndhF sequences.

Published in:

Plant Systematics & Evolution, 2003, v. 242, n. 1-4, p. 1, doi. 10.1007/s00606-003-0014-1

By:

Osaloo, S. Kazempour;
Maassoumi, A. A.;
Murakami, N.

Publication type:

Article

Translational regulations as specific traits of chloroplast gene expression

Published in:

FEBS Letters, 2002, v. 529, n. 1, p. 39, doi. 10.1016/S0014-5793(02)03260-X

By:

Choquet, Yves;
Wollman, Francis-André

Publication type:

Article

Glutathione reductase gene expression depends on chloroplast signals in Arabidopsis thaliana.

Published in:

Biochemistry (00062979), 2016, v. 81, n. 4, p. 364, doi. 10.1134/S0006297916040064

By:

Garnik, E.;
Belkov, V.;
Tarasenko, V.;
Korzun, M.;
Konstantinov, Yu.

Publication type:

Article

Phylogeny and differentiation of the St genome in Elymus L. sensu lato (Triticeae; Poaceae) based on one nuclear DNA and two chloroplast genes.

Published in:

BMC Plant Biology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12870-015-0517-2

By:

Zhen-Zhen Dong;
Xing Fan;
Li-Na Sha;
Yi Wang;
Jian Zeng;
Hou-Yang Kang;
Hai-Qin Zhang;
Xiao-Li Wang;
Li Zhang;
Chun-Bang Ding;
Rui-Wu Yang;
Yong-Hong Zhou

Publication type:

Article

Purine biosynthetic enzyme ATase2 is involved in the regulation of early chloroplast development and chloroplast gene expression in Arabidopsis.

Published in:

Photosynthesis Research, 2015, v. 126, n. 2/3, p. 285, doi. 10.1007/s11120-015-0131-z

By:

Yang, Zhipan;
Shang, Zengzhen;
Wang, Lei;
Lu, Qingtao;
Wen, Xiaogang;
Chi, Wei;
Zhang, Lixin;
Lu, Congming

Publication type:

Article

Expression of chloroplast photosynthesis genes during leaf senescence.

Published in:

Physiologia Plantarum, 1990, v. 80, n. 2, p. 217, doi. 10.1111/j.1399-3054.1990.tb04399.x

By:

Bate, Nicholas J.;
Straus, N. A.;
Thompson, J. E.

Publication type:

Article

PHYLOGENETIC RELATIONSHIPS AMONG STREPTOPHYTES AS INFERRED FROM CHLOROPLAST SMALL AND LARGE SUBUNIT rRNA GENE SEQUENCES<sup>1</sup>.

Published in:

Journal of Phycology, 2002, v. 38, n. 2, p. 364, doi. 10.1046/j.1529-8817.2002.01163.x

By:

Turmel, Monique;
Ehara, Megumi;
Otis, Christian;
Lemieux, Claude

Publication type:

Article

The phylogeographic structure and conservation genetics of the endangered tree peony, Paeonia rockii (Paeoniaceae), inferred from chloroplast gene sequences.

Published in:

Conservation Genetics, 2011, v. 12, n. 6, p. 1539, doi. 10.1007/s10592-011-0251-8

By:

Yuan, Jun-hui;
Cheng, Fang-Yun;
Zhou, Shi-Liang

Publication type:

Article

Phylogeny and taxonomy of the polyploid species that contain St genome (Triticeae; Poaceae) based on four nuclear DNA and three chloroplast genes.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06179-5

By:

Pan, Xiaoyang;
Zheng, Tingting;
Zhao, Yuxin;
Bao, Junhao;
Fan, Xing;
Sha, Lina;
Li, Yinghui;
Zhu, Wei;
Xu, Lili;
Wang, Yi;
Cheng, Yiran;
Zhang, Haiqin;
Kang, Houyang;
Zhou, Yonghong;
Wu, Dandan

Publication type:

Article

Mapping of the css ( chloroplast splicing suppressor) gene(s) to a recombinationally suppressed region of chromosome III in Chlamydomonas reinhardtii.

Published in:

Genome, 2012, v. 55, n. 7, p. 483, doi. 10.1139/g2012-035

By:

Luo, Liming;
Lee, Jaesung;
Herrin, David L.;
Bonen, L.

Publication type:

Article

Effects of Reduced Chloroplast Gene Copy Number on Chloroplast Gene Expression in Maize.

Published in:

Plant Physiology, 2012, v. 160, n. 3, p. 1420, doi. 10.1104/pp.112.204198

By:

Udy, Dylan B.;
Belcher, Susan;
Williams-Carrier, Rosalind;
Gualberto, José M.;
Barkan, Alice

Publication type:

Article

The crucial role of mitochondrial/chloroplast-related genes in viral genome replication and host defense: integrative systems biology analysis in plant-virus interaction.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1551123

By:

Shahriari, Amir Ghaffar;
Tahmasebi, Aminallah;
Ghodoum Parizipour, Mohamad Hamed;
Soltani, Zahra;
Tahmasebi, Ahmad;
Shahid, Muhammad Shafiq

Publication type:

Article

TRANSLATION REGULATION OF INTRON-CONTAINING GENES IN CHLOROPLASTS.

Published in:

Journal of Bioinformatics & Computational Biology, 2006, v. 4, n. 4, p. 783, doi. 10.1142/S0219720006002235

By:

SELIVERSTOV, ALEXANDER;
LYUBETSKY, VASSILY

Publication type:

Article

A pentatricopeptide repeat protein DUA1 interacts with sigma factor 1 to regulate chloroplast gene expression in Rice.

Published in:

Photosynthesis Research, 2021, v. 147, n. 2, p. 131, doi. 10.1007/s11120-020-00793-0

By:

Du, Yanxin;
Mo, Weiping;
Ma, Tingting;
Tang, Weijiang;
Tian, Lijin;
Lin, Rongcheng

Publication type:

Article

Structural and functional characterization of a transcription-enhancing sequence element in the rbcL gene of the Chlamydomonas chloroplast genome.

Published in:

Current Genetics, 2002, v. 41, n. 5, p. 349, doi. 10.1007/s00294-002-0311-1

By:

Anthonisen, Inger;
Kasai, Seitaro;
Kato, Ko;
Salvador, Maria;
Klein, Uwe

Publication type:

Article

Drought-Stress-Induced Changes in Chloroplast Gene Expression in Two Contrasting Strawberry Tree (Arbutus unedo L.) Genotypes.

Published in:

Plants (2223-7747), 2023, v. 12, n. 24, p. 4133, doi. 10.3390/plants12244133

By:

Martins, João;
Neves, Mariana;
Canhoto, Jorge

Publication type:

Article

Salt Stress Inhibits Photosynthesis and Destroys Chloroplast Structure by Downregulating Chloroplast Development–Related Genes in Robinia pseudoacacia Seedlings.

Published in:

Plants (2223-7747), 2023, v. 12, n. 6, p. 1283, doi. 10.3390/plants12061283

By:

Lu, Chaoxia;
Li, Lingyu;
Liu, Xiuling;
Chen, Min;
Wan, Shubo;
Li, Guowei

Publication type:

Article

Genetic relationships of tetraploid Elymus species and their genomic donor species inferred from polymerase chain reaction-restriction length polymorphism analysis of chloroplast gene regions.

Published in:

Theoretical & Applied Genetics, 2004, v. 108, n. 3, p. 535, doi. 10.1007/s00122-003-1453-3

By:

McMillan, Erin;
Sun, Genlou

Publication type:

Article

Context-Dependent Mutation Dynamics, Not Selection, Explains the Codon Usage Bias of Most Angiosperm Chloroplast Genes.

Published in:

Journal of Molecular Evolution, 2022, v. 90, n. 1, p. 17, doi. 10.1007/s00239-021-10038-w

By:

Morton, Brian R.

Publication type:

Article

Phylogeny of Ultra-Rapidly Evolving Dinoflagellate Chloroplast Genes: A Possible Common Origin for Sporozoan and Dinoflagellate Plastids.

Published in:

Journal of Molecular Evolution, 2000, v. 51, n. 1, p. 26, doi. 10.1007/s002390010064

By:

Zhang, Zhaoduo;
Green, Beverley R.;
Cavalier-Smith, Thomas

Publication type:

Article

Overexpression of the recombinant human interferon-beta (rhIFN-β) gene in tobacco chloroplasts.

Published in:

Biotechnologia, 2021, v. 102, n. 4, p. 367, doi. 10.5114/bta.2021.111094

By:

FEIZI, ASGHAR;
BAGHBANKOHNEHROUZ, BAHRAM

Publication type:

Article

A Novel Chloroplast Protein RNA Processing 8 Is Required for the Expression of Chloroplast Genes and Chloroplast Development in Arabidopsis thaliana.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.700975

By:

Kong, Mengmeng;
Wu, Yaozong;
Wang, Ziyuan;
Qu, Wantong;
Lan, Yixin;
Chen, Xin;
Liu, Yanyun;
Shahnaz, Perveen;
Yang, Zhongnan;
Yu, Qingbo;
Mi, Hualing

Publication type:

Article

New insights into the hybrid origin of Malus toringoides and its close relatives based on a single-copy nuclear gene SbeI and three chloroplast fragments.

Published in:

Journal of Systematics & Evolution, 2014, v. 52, n. 4, p. 477, doi. 10.1111/jse.12079

By:

TANG, Liang;
LI, Ju;
TAN, Si;
LI, Ming‐Xia;
MA, Xiang;
ZHOU, Zhi‐Qin

Publication type:

Article

The melatonin receptor CAND2 is involved in the regulation of photosynthesis and chloroplast gene expression in Arabidopsis thaliana under photooxidative stress.

Published in:

Photosynthetica, 2021, v. 59, n. 4, p. 683, doi. 10.32615/ps.2021.061

By:

BYCHKOV, I. A.;
KUDRYAKOVA, N. V.;
POJIDAEVA, E. S.;
KUSNETSOV, V. V.

Publication type:

Article

The chloroplast ribosomal protein L21 gene is essential for plastid development and embryogenesis in Arabidopsis.

Published in:

Planta: An International Journal of Plant Biology, 2012, v. 235, n. 5, p. 907, doi. 10.1007/s00425-011-1547-0

By:

Yin, Tuanzhang;
Pan, Gang;
Liu, Han;
Wu, Jian;
Li, Yongpeng;
Zhao, Zhenxing;
Fu, Tingdong;
Zhou, Yongming

Publication type:

Article

SulP, a nuclear gene encoding a putative chloroplast-targeted sulfate permease in Chlamydomonas reinhardtii.

Published in:

Planta: An International Journal of Plant Biology, 2003, v. 218, n. 1, p. 98, doi. 10.1007/s00425-003-1076-6

By:

Hsu-Ching Chen;
Kittisak Yokthongwattana;
A. Jamila Newton;
Anastasios Melis

Publication type:

Article

苗药小花清风藤叶绿体基因 psbA-trnH序列特征及遗传多样性分析.

Published in:

Acta Agriculturae Zhejiangensis, 2020, v. 32, n. 5, p. 810, doi. 10.3969/j.issn.1004-1524.2020.05.08

By:

严福林;
王波;
温迪;
徐文芬;
孙庆文;
魏升华

Publication type:

Article

Chloroplast translational regulation uncovers nonessential photosynthesis genes as key players in plant cold acclimation.

Published in:

Plant Cell, 2022, v. 34, n. 5, p. 2056, doi. 10.1093/plcell/koac056

By:

Gao, Yang;
Thiele, Wolfram;
Saleh, Omar;
Scossa, Federico;
Arabi, Fayezeh;
Zhang, Hongmou;
Sampathkumar, Arun;
Kühn, Kristina;
Fernie, Alisdair;
Bock, Ralph;
Schöttler, Mark A;
Zoschke, Reimo

Publication type:

Article

Twice as NCC: Two Octotricopeptide Repeat Proteins and the Regulation of Chloroplast Gene Expression.

Published in:

Plant Cell, 2015, v. 27, n. 4, p. 947, doi. 10.1105/tpc.15.00211

By:

Mach, Jennifer

Publication type:

Article

Reversible Expression of Essential Chloroplast Genes in Chlamydomonas.

Published in:

Plant Cell, 2013, v. 25, n. 1, p. 2, doi. 10.1105/tpc.113.250111

By:

Bertoni, Gregory

Publication type:

Article

Repression of Essential Chloroplast Genes Reveals New Signaling Pathways and Regulatory Feedback Loops in Chlamydomonas.

Published in:

Plant Cell, 2013, v. 25, n. 1, p. 167, doi. 10.1105/tpc.112.103051

By:

Ramundo, Silvia;
Rahire, Michèle;
Schaad, Olivier;
Rochaix, Jean-David

Publication type:

Article

Chloroplast genes as genetic markers for inferring patterns of change, maternal ancestry and phylogenetic relationships among Eleusine species.

Published in:

AoB Plants, 2014, v. 6, p. 1, doi. 10.1093/aobpla/plt056

By:

Agrawal, Renuka;
Agrawal, Nitin;
Tandon, Rajesh;
Raina, Soom Nath

Publication type:

Article

The Pentratricopeptide Repeat Protein Pigment-Defective Mutant2 is Involved in the Regulation of Chloroplast Development and Chloroplast Gene Expression in Arabidopsis.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 4, p. 747, doi. 10.1093/pcp/pcx004

By:

Liang Du;
Jian Zhang;
Shaofeng Qu;
Yuanyuan Zhao;
Bodan Su;
Xueqin Lv;
Ruili Li;
Yinglang Wan;
Jianwei Xiao

Publication type:

Article

DELAYED GREENING 238, a Nuclear-Encoded Chloroplast Nucleoid Protein, Is Involved in the Regulation of Early Chloroplast Development and Plastid Gene Expression in Arabidopsis thaliana.

Published in:

Plant & Cell Physiology, 2016, v. 57, n. 12, p. 2586, doi. 10.1093/pcp/pcw172

By:

Menglong Wang;
Lan Jiang;
Qingen Da;
Jun Liu;
Dongru Feng;
Jinfa Wang;
Hong-Bin Wang;
Hong-Lei Jin

Publication type:

Article

Phylogenetic analysis of six different species of Saraca L. (Fabaceae, Caesalpinioideae) based on chloroplast matK gene.

Published in:

Biodiversitas: Journal of Biological Diversity, 2021, v. 22, n. 9, p. 3880, doi. 10.13057/biodiv/d220934

By:

SIL, SUJIT;
DE, KALYAN KUMAR;
GHOSH, ASOK

Publication type:

Article

ANALYSIS OF <em>HETEROSIGMA CARTERAE</em> (CHROMOPHYTA, RAPHIDOPHYCEAE) CHLOROPLAST rpoB GENE SEQUENCE.

Published in:

Journal of Phycology, 1995, v. 31, n. 5, p. 808, doi. 10.1111/j.0022-3646.1995.00808.x

By:

Mangahas, Jeff L.;
Cattolico, Rose Ann;
Reynolds, Ann E.

Publication type:

Article

Enhanced green fluorescent protein ( egfp) gene expression in Tetraselmis subcordiformis chloroplast with endogenous regulators.

Published in:

World Journal of Microbiology & Biotechnology, 2016, v. 32, n. 5, p. 1, doi. 10.1007/s11274-016-2039-y

By:

Cui, Yulin;
Zhao, Jialin;
Hou, Shichang;
Qin, Song

Publication type:

Article