Works matching Nucleic acid isolation methods

Results: 3037

SSNIP-seq: A simple and rapid method for isolation of single-sperm nucleic acid for high-throughput sequencing.

Published in:

PLoS ONE, 2022, v. 17, n. 9, p. 1, doi. 10.1371/journal.pone.0275168

By:

Novakovic, Stevan;
Tsui, Vanessa;
Semple, Tim;
Martelotto, Luciano;
McCarthy, Davis J.;
Crismani, Wayne

Publication type:

Article

A fast, low-cost, robust and high-throughput method for viral nucleic acid isolation based on NAxtra magnetic nanoparticles.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-38743-0

By:

Ravlo, Erlend;
Sousa, Mirta Mittelstedt Leal de;
Andersen, Lise Lima;
Holberg-Petersen, Mona;
Klundby, Ingvild;
Aas, Per Arne;
Hagen, Lars;
Erlandsen, Sten Even;
Malmring, Janne Fossum;
Ali, Zeeshan;
Sharma, Anuvansh;
Ottesen, Vegar;
Bandyopadhyay, Sulalit;
Bjørås, Magnar

Publication type:

Article

A modified dual preparatory method for improved isolation of nucleic acids from laser microdissected fresh-frozen human cancer tissue specimens.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae066

By:

Kimble, Danielle C;
Litzi, Tracy J;
Snyder, Gabrielle;
Olowu, Victoria;
TaQee, Sakiyah;
Conrads, Kelly A;
Loffredo, Jeremy;
Bateman, Nicholas W;
Alba, Camille;
Rice, Elizabeth;
Shriver, Craig D;
Maxwell, George L;
Dalgard, Clifton;
Conrads, Thomas P

Publication type:

Article

A universal protocol for high-quality DNA and RNA isolation from diverse plant species.

Published in:

PLoS ONE, 2023, v. 18, n. 12, p. 1, doi. 10.1371/journal.pone.0295852

By:

Masoomi-Aladizgeh, Farhad;
Jabbari, Leila;
Khayam Nekouei, Reza;
Aalami, Ali;
Atwell, Brian J.;
Haynes, Paul A.

Publication type:

Article

Easy Express Extraction (Triple E)—A Universal, Electricity-Free Nucleic Acid Extraction System for the Lab and the Pen.

Published in:

Microorganisms, 2022, v. 10, n. 5, p. 1074, doi. 10.3390/microorganisms10051074

By:

Korthase, Christian;
Elnagar, Ahmed;
Beer, Martin;
Hoffmann, Bernd

Publication type:

Article

ALLOJENİK KÖK HÜCRE NAKİLLERİNDE MİKROBİYOTA ETKİSİ.

Published in:

Journal of Istanbul Faculty of Medicine / İstanbul Tıp Fakültesi Dergisi, 2022, v. 85, n. 3, p. 296, doi. 10.26650/IUITFD.1027106

By:

GÜRER, Ekin Ece;
OĞUZ, Fatma SAVRAN;
KALAYOĞLU, Sevgi BEŞIŞIK;
AKTAŞ, Zerrin;
GÜLBAŞ, Zafer;
ÖNCÜL, Mustafa Oral;
SEZERMAN, Uğur

Publication type:

Article

Blood Collection and Cell-Free DNA Isolation Methods Influence the Sensitivity of Liquid Biopsy Analysis for Colorectal Cancer Detection.

Published in:

Pathology & Oncology Research, 2019, v. 25, n. 3, p. 915, doi. 10.1007/s12253-018-0382-z

By:

Barták, Barbara Kinga;
Kalmár, Alexandra;
Galamb, Orsolya;
Wichmann, Barnabás;
Nagy, Zsófia Brigitta;
Tulassay, Zsolt;
Dank, Magdolna;
Igaz, Péter;
Molnár, Béla

Publication type:

Article

ADVANCED RECEPTIONS IN THE METHODOLOGY OF EXTRACTION TOTAL AND VIRAL NUCLEIC ACIDS FROM BASIDIOMYCETES.

Published in:

Agriculture & Forestry / Poljoprivreda i šumarstv, 2021, v. 67, n. 1, p. 83, doi. 10.17707/AgricultForest.67.1.07

By:

IVANOVA, Tetiana

Publication type:

Article

A modified CTAB method for the extraction of high-quality RNA from mono-and dicotyledonous plants rich in secondary metabolites.

Published in:

Plant Methods, 2024, v. 20, n. 1, p. 1, doi. 10.1186/s13007-024-01198-z

By:

Kiss, Tibor;
Karácsony, Zoltán;
Gomba-Tóth, Adrienn;
Szabadi, Kriszta Lilla;
Spitzmüller, Zsolt;
Hegyi-Kaló, Júlia;
Cels, Thomas;
Otto, Margot;
Golen, Richárd;
Hegyi, Ádám István;
Geml, József;
Váczy, Kálmán Zoltán

Publication type:

Article

Significant compartment‐specific impact of different RNA extraction methods and PCR assays on the sensitivity of hepatitis E virus detection.

Published in:

Liver International, 2021, v. 41, n. 8, p. 1815, doi. 10.1111/liv.14870

By:

Behrendt, Patrick;
Bremer, Birgit;
Todt, Daniel;
Steinmann, Eike;
Manns, Michael Peter;
Cornberg, Markus;
Wedemeyer, Heiner;
Maasoumy, Benjamin

Publication type:

Article

Effective Molecular Identification of Ectomycorrhizal Fungi: Revisiting DNA Isolation Methods.

Published in:

Forests (19994907), 2019, v. 10, n. 3, p. 218, doi. 10.3390/f10030218

By:

Janowski, Daniel;
Wilgan, Robin;
Leski, Tomasz;
Karliński, Leszek;
Rudawska, Maria

Publication type:

Article

Automated total nucleic acid extraction with magnetic beads for the detection of Plasmodium falciparum in large study cohorts.

Published in:

Malaria Journal, 2024, v. 23, n. 1, p. 1, doi. 10.1186/s12936-024-05227-z

By:

Inoue, Juliana;
Huber, Nina;
Fendel, Rolf;
Held, Jana

Publication type:

Article

An easy and robust method for the isolation of high quality RNA from coconut tissues.

Published in:

Electronic Journal of Biotechnology, 2020, v. 48, p. 78, doi. 10.1016/j.ejbt.2020.09.008

By:

Iqbal, Amjad;
Yaodong Yang;
Yi Wu;
Jing Li;
Hamayun, Muhammad;
Hussain, Anwar;
Shah, Farooq

Publication type:

Article

Ionic liquid-assisted seed genomic DNA extraction for advanced sequencing applications.

Published in:

Plant Methods, 2025, v. 21, n. 1, p. 1, doi. 10.1186/s13007-025-01417-1

By:

De Silva, Shashini;
Bentz, Philip C.;
Cagliero, Cecilia;
Gostel, Morgan R.;
Johnson, Gabriel;
Anderson, Jared L.

Publication type:

Article

Degrade Adli Örnekler için Mitokondriyal DNA Amplifikasyon ve Dizileme Stratejisi Geliştirme: Deneysel Çalışma.

Published in:

Turkiye Klinikleri Journal of Forensic Medicine & Forensic Sciences / Türkiye Klinikleri Adli Tıp ve Adli Bilimler Dergisi, 2025, v. 22, n. 2, p. 98, doi. 10.5336/forensic.2024-106910

By:

MATOVU, Peter;
CANAN, Hüsniye;
SERİN, Ayşe

Publication type:

Article

Feasibility of extracting usable DNA from blood samples stored up to 21 years in the DiPiS study.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-08257-y

By:

Svärd, Agnes Andersson;
Viberg, Ellen;
von Platen, India;
Jönsson, Ida;
Lundgren, Markus;
Ramelius, A.;
Andersson, C.;
Bennet, R.;
Ask, M.;
Bremer, J.;
Brundin, C.;
Cilio, C.;
Elding Larsson, H.;
Hansson, C.;
Hansson, G.;
Ivarsson, S.;
Jonsdottir, B.;
Jonsson, I.;
Lindberg, B.;
Lernmark, B.

Publication type:

Article

Evaluation of Commercially Available Kits for Parallel DNA and microRNA Isolation Suitable for Epigenetic Analyses from Cell-Free Saliva and Salivary Extracellular Vesicles.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 13, p. 6365, doi. 10.3390/ijms26136365

By:

Yousaf, Iqra;
Kegler, Ulrike;
Hofner, Manuela;
Noehammer, Christa

Publication type:

Article

Development of Detection Method Using Dried Blood Spot with Next-Generation Sequencing and LabDroid for Gene Doping Control.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 13, p. 6129, doi. 10.3390/ijms26136129

By:

Maehara, Kiyoshi;
Hirokawa, Atsushi;
Watanabe, Hinata;
Otani, Norihiro;
Wan, Jiawei;
Shirai, Takanaga;
Takemasa, Tohru;
Watanabe, Koichi;
Nishi, Takeki;
Sato, Ken;
Shimmura, Suzuka;
Nguyen, Kieu D. M.;
Takahashi, Yoichiro;
Sugasawa, Takehito

Publication type:

Article

DNA ISOLATION FROM SIX SPOTTED LADYBIRD BEETLE CHEILOMENES SEXMACULATA (F).

Published in:

Indian Journal of Entomology, 2025, v. 87, n. 2, p. 1, doi. 10.55446/IJE.2024.2155

By:

RAKSHITH, H. S.;
SUROSHE, SACHIN S.;
KEERTHI, M. C.;
CHANDER, SUBHASH;
ROY, DIYA

Publication type:

Article

Fumed silica-coated magnetic particles: DNA extraction application.

Published in:

Studia Universitatis Babeş-Bolyai, Biologia, 2025, v. 70, n. 1, p. 1

By:

TJOA, Stanley Evander Emeltan;
MUDASIR, Mudasir;
SUHARYADI, Edi;
DARYONO, Budi Setiadi

Publication type:

Article

Optimising RNA extraction for paddy bulk soil samples for metatranscriptome sequencing.

Published in:

BMC Research Notes, 2025, v. 18, n. 1, p. 1, doi. 10.1186/s13104-025-07342-9

By:

Sivaprakasam, Sumitra;
Yee Fan, Tan;
Kumarasan, Yukgehnaish;
Hata, Erneeza Mohd;
Vadamalai, Ganesan;
Petersen, Bent;
Sicheritz-Pontén, Thomas;
Parimannan, Sivachandran;
Rajandas, Heera

Publication type:

Article

Systematic Review: Recent Developments in Magnetic-Nanoparticle-Based DNA Extraction.

Published in:

Makara Journal of Science, 2025, v. 29, n. 2, p. 179, doi. 10.7454/mss.v29i2.2303

By:

Emeltan Tjoa, Stanley Evander;
Mudasir, Mudasir;
Suharyadi, Edi;
Daryono, Budi Setiadi

Publication type:

Article

A non-destructive, fast, inexpensive, non-toxic chelating resin-based DNA extraction protocol for insect voucher specimens and associated microbiomes Open Access.

Published in:

Journal of Insect Science, 2025, v. 25, n. 3, p. 1, doi. 10.1093/jisesa/ieaf062

By:

Brown, Morgan E;
Ottati, Sara;
Trivellone, Valeria

Publication type:

Article

A two phase ensembled deep learning approach of prominent gene extraction and disease risk prediction detection.

Published in:

Applied Computer Science (1895-3735), 2025, v. 21, n. 2, p. 111, doi. 10.35784/acs_6958

By:

DEBATA, Prajna Paramita;
PARHI, Pournamasi;
TRIPATHY, Alakananda;
DAS, Smruti Rekha

Publication type:

Article

18S rDNA next-generation sequencing uncovers the biodiversity of Gastrointestinal parasites in Tibetan grazing ruminants in China.

Published in:

BMC Veterinary Research, 2025, v. 21, p. 1, doi. 10.1186/s12917-025-04887-6

By:

Wu, Siran;
Zhong, Ying;
Li, Haitao;
Tang, Chen;
Zhang, Bin;
Zhang, Runhui

Publication type:

Article

A Refined Approach to Isolate Interneurons for High-Validity Epigenetic Studies in Human Brain Tissue.

Published in:

Methods & Protocols, 2025, v. 8, n. 3, p. 61, doi. 10.3390/mps8030061

By:

Cariaga-Martínez, Ariel;
Gutierrez, Kilian Jesús;
Regidor, Ignacio;
Del Álamo, Marta;
Saiz-Ruiz, Jerónimo;
Alelú-Paz, Raúl

Publication type:

Article

Rapid and Efficient DNA Extraction Protocol from Peruvian Native Cotton (Gossypium barbadense L.) Lambayeque, Peru.

Published in:

Methods & Protocols, 2025, v. 8, n. 3, p. 50, doi. 10.3390/mps8030050

By:

Lopez, Luis Miguel Serquén;
Gonzales, Herry Lloclla;
Garcia, Wilmer Enrique Vidaurre;
de Jesus Velez Chicoma, Ricardo Leonidas;
Greta, Mendoza Cornejo

Publication type:

Article

Where Next for Microbiome Research?

Published in:

PLoS Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1371/journal.pbio.1002050

By:

Waldor, Matthew K.;
Tyson, Gene;
Borenstein, Elhanan;
Ochman, Howard;
Moeller, Andrew;
Finlay, B. Brett;
Kong, Heidi H.;
Gordon, Jeffrey I.;
Nelson, Karen E.;
Dabbagh, Karim;
Smith, Hamilton

Publication type:

Article

Quantitative evaluation of properties of residual DNA in Cryptomeria japonica wood.

Published in:

Journal of Wood Science, 2015, v. 61, n. 1, p. 1, doi. 10.1007/s10086-014-1447-6

By:

Watanabe, Ugai;
Abe, Hisashi;
Yoshida, Kazumasa;
Sugiyama, Junji

Publication type:

Article

Fungal Keratitis Secondary to Trametes betulina: A Case Report and Review of Literature.

Published in:

Mycopathologia, 2017, v. 182, n. 7/8, p. 755, doi. 10.1007/s11046-017-0128-6

By:

Hardin, Joshua;
Sutton, Deanna;
Wiederhold, Nathan;
Mele, James;
Goyal, Sunali

Publication type:

Article

Diagnosis of Dermatophytosis Using Molecular Biology.

Published in:

Mycopathologia, 2017, v. 182, n. 1/2, p. 193, doi. 10.1007/s11046-016-0038-z

By:

Verrier, Julie;
Monod, Michel

Publication type:

Article

The Application of Laser Microdissection in Molecular Detection and Identification of Aspergillus fumigatus from Murine Model of Acute Invasive Pulmonary Aspergillosis.

Published in:

Mycopathologia, 2014, v. 178, n. 1/2, p. 53, doi. 10.1007/s11046-014-9777-x

By:

Wang, Chong;
Zhan, Ping;
Wang, Le;
Zeng, Rong;
Shen, Yongnian;
Lv, Guixia;
Li, Dongmei;
Deng, Shuwen;
Liu, Weida

Publication type:

Article

Effective and economical column-based method for RNA isolation from animal cells.

Published in:

Biotechnology Letters, 2019, v. 41, n. 8/9, p. 915, doi. 10.1007/s10529-019-02700-7

By:

Niu, Qiaoge;
Cao, Maosheng;
Chen, Shuxiong;
Zhao, Yun;
Chen, Lu;
Li, Chunjin;
Zhou, Xu

Publication type:

Article

Improved nucleic acid extraction protocols for Ganoderma boninense, G. miniatocinctum and G. tornatum.

Published in:

Biotechnology Letters, 2018, v. 40, n. 11/12, p. 1541, doi. 10.1007/s10529-018-2603-7

By:

Nagappan, Jayanthi;
Chin, Chiew Foan;
Angel, Lee Pei Lee;
Cooper, Richard M.;
May, Sean T.;
Low, Eng-Ti Leslie

Publication type:

Article

Modified method for the extraction of mRNA from paddy soils.

Published in:

Biotechnology Letters, 2016, v. 38, n. 12, p. 2163, doi. 10.1007/s10529-016-2208-y

By:

Qin, Hongling;
Chen, Xiangbi;
Tang, Yafang;
Hou, Haijun;
Sheng, Rong;
Shen, Jinlin

Publication type:

Article

Solid-phase DNA isolation from food matrices using hydrophilic magnetic microspheres.

Published in:

Food & Bioproducts Processing: Transactions of the Institution of Chemical Engineers Part C, 2015, v. 94, p. 375, doi. 10.1016/j.fbp.2014.05.001

By:

Trachtová, Štěpánka;
Španová, Alena;
Tóth, Judit;
Prettl, Zsolt;
Horák, Daniel;
Gyenis, János;
Rittich, Bohuslav

Publication type:

Article

Employment of pqqE gene as molecular marker for the traceability of Gram negative phosphate solubilizing bacteria associated to plants.

Published in:

Current Genetics, 2024, v. 70, n. 1, p. 1, doi. 10.1007/s00294-024-01296-4

By:

Anzuay, María Soledad;
Chiatti, Mario Hernán;
Intelangelo, Ariana Belén;
Ludueña, Liliana Mercedes;
Viso, Natalia Pin;
Angelini, Jorge Guillermo;
Taurian, Tania

Publication type:

Article

A modified culture medium and hyphae isolation method can increase quality of the RNA extracted from mycelia of a dimorphic fungal species.

Published in:

Current Genetics, 2021, v. 67, n. 5, p. 823, doi. 10.1007/s00294-021-01181-4

By:

Papp, László Attila;
Ács-Szabó, Lajos;
Póliska, Szilárd;
Miklós, Ida

Publication type:

Article

Abundance and activity of vinyl chloride (VC)-oxidizing bacteria in a dilute groundwater VC plume biostimulated with oxygen and ethene.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 21, p. 9267, doi. 10.1007/s00253-015-6771-2

By:

Mattes, Timothy;
Jin, Yang;
Livermore, Joshua;
Pearl, Meredith;
Liu, Xikun

Publication type:

Article

Sponge-associated actinobacterial diversity: validation of the methods of actinobacterial DNA extraction and optimization of 16S rRNA gene amplification.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 20, p. 8731, doi. 10.1007/s00253-015-6875-8

By:

Yang, Qi;
Franco, Christopher;
Zhang, Wei

Publication type:

Article

Elucidating carbon uptake from vinyl chloride using stable isotope probing and Illumina sequencing.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 18, p. 7735, doi. 10.1007/s00253-015-6606-1

By:

Paes, Fernanda;
Liu, Xikun;
Mattes, Timothy;
Cupples, Alison

Publication type:

Article

Acetoclastic methanogenesis is likely the dominant biochemical pathway of palmitate degradation in the presence of sulfate.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 18, p. 7757, doi. 10.1007/s00253-015-6669-z

By:

Lv, Lei;
Mbadinga, Serge;
Wang, Li-Ying;
Liu, Jin-Feng;
Gu, Ji-Dong;
Mu, Bo-Zhong;
Yang, Shi-Zhong

Publication type:

Article

Isolation and characterization of novel lipases/esterases from a bovine rumen metagenome.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 13, p. 5475, doi. 10.1007/s00253-014-6355-6

By:

Privé, Florence;
Newbold, C;
Kaderbhai, Naheed;
Girdwood, Susan;
Golyshina, Olga;
Golyshin, Peter;
Scollan, Nigel;
Huws, Sharon

Publication type:

Article

Increased levels of antibiotic resistance in urban stream of Jiulongjiang River, China.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 13, p. 5697, doi. 10.1007/s00253-015-6416-5

By:

Ouyang, Wei-Ying;
Huang, Fu-Yi;
Zhao, Yi;
Li, Hu;
Su, Jian-Qiang

Publication type:

Article

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 5, p. 2165, doi. 10.1007/s00253-014-6038-3

By:

Tchigvintsev, Anatoli;
Tran, Hai;
Popovic, Ana;
Kovacic, Filip;
Brown, Greg;
Flick, Robert;
Hajighasemi, Mahbod;
Egorova, Olga;
Somody, Joseph;
Tchigvintsev, Dmitri;
Khusnutdinova, Anna;
Chernikova, Tatyana;
Golyshina, Olga;
Yakimov, Michail;
Savchenko, Alexei;
Golyshin, Peter;
Jaeger, Karl-Erich;
Yakunin, Alexander

Publication type:

Article

Batch, design optimization, and DNA sequencing study for continuous 1,3-propanediol production from waste glycerol by a soil-based inoculum.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 5, p. 2105, doi. 10.1007/s00253-014-6259-5

By:

Kanjilal, Baishali;
Noshadi, Iman;
Bautista, Eddy;
Srivastava, Ranjan;
Parnas, Richard

Publication type:

Article

Impacts of CO concentration on growth, lipid accumulation, and carbon-concentrating-mechanism-related gene expression in oleaginous Chlorella.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 5, p. 2451, doi. 10.1007/s00253-015-6397-4

By:

Fan, Jianhua;
Xu, Hui;
Luo, Yuanchan;
Wan, Minxi;
Huang, Jianke;
Wang, Weiliang;
Li, Yuanguang

Publication type:

Article

Detection of pork adulteration in processed meat by species-specific PCR-QIAxcel procedure based on D-loop and cytb genes.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 23, p. 9805, doi. 10.1007/s00253-014-6084-x

By:

Barakat, Hassan;
El-Garhy, Hoda;
Moustafa, Mahmoud

Publication type:

Article

Physical lysis only (PLO) methods suitable as rapid sample pretreatment for qPCR assay.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 20, p. 8719, doi. 10.1007/s00253-014-6064-1

By:

Wang, Xiaofang;
Lee, Byung-Tae;
Son, Ahjeong

Publication type:

Article

Use of a genetically-engineered Escherichia coli strain as a sample process control for quantification of the host-specific bacterial genetic markers.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 20, p. 9165, doi. 10.1007/s00253-013-5188-z

By:

Kobayashi, Ayano;
Sano, Daisuke;
Taniuchi, Asami;
Ishii, Satoshi;
Okabe, Satoshi

Publication type:

Article