Works matching DE "GENOMIC imprinting"

Results: 1516

DNA methylation mechanisms in the maturing and ageing oocyte.

Published in:

Epigenetics & Chromatin, 2025, v. 18, n. 1, p. 1, doi. 10.1186/s13072-025-00600-x

By:

Caniçais, Carla;
Vasconcelos, Sara;
Santos, Fátima;
Dória, Sofia;
Marques, C. Joana

Publication type:

Article

Multi-locus methylation analyses reveal GNAS methylation defects in three patients with the Beckwith–Wiedemann syndrome phenotype and no molecular defects in the 11p15.5 imprinted region.

Published in:

Clinical Epigenetics, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13148-025-01907-y

By:

Urakawa, Tatsuki;
Kanamaru, Yuri;
Amano, Naoko;
Uchida, Akira;
Fukami, Maki;
Kagami, Masayo

Publication type:

Article

Post-fertilization transcription initiation in an ancestral LTR retrotransposon drives lineage- specific genomic imprinting of ZDBF2.

Published in:

eLife, 2025, p. 1, doi. 10.7554/eLife.94502

By:

Hisato Kobayashi;
Tatsushi Igaki;
Soichiro Kumamoto;
Keisuke Tanaka;
Tomoya Takashima;
Nagaoka, So I.;
Shunsuke Suzuki;
Masaaki Hayashi;
Renfree, Marilyn B.;
Manabu Kawahara;
Shun Saito;
Toshihiro Kobayashi;
Hiroshi Nagashima;
Hitomi Matsunari;
Kazuaki Nakano;
Ayuko Uchikura;
Hiroshi Kiyonari;
Mari Kaneko;
Hiroo Imai;
Kazuhiko Nakabayashi

Publication type:

Article

Monoallelic gene expression in developing cells increases genetic noise and Shannon entropy.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08128-2

By:

Wolff, Robert;
Balzani, Edoardo;
Gelli, Elisa;
Polito, Alessia;
Serani, Angelo;
Tucci, Valter

Publication type:

Article

Conservation of imprinted expression across genotypes is correlated with consistency of imprinting across endosperm development in maize Open Access.

Published in:

G3: Genes | Genomes | Genetics, 2025, v. 15, n. 4, p. 1, doi. 10.1093/g3journal/jkaf028

By:

Higgins, Kaitlin;
Nyabashi, Vital;
Anderson, Sarah

Publication type:

Article

Maternal loss of mouse Nlrp2 alters the transcriptome and DNA methylome in GV oocytes and impairs zygotic genome activation in embryos.

Published in:

Clinical Epigenetics, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13148-025-01889-x

By:

Anvar, Zahra;
Jochum, Michael D.;
Chakchouk, Imen;
Sharif, Momal;
Demond, Hannah;
To, Alvin K.;
Kraushaar, Daniel C.;
Wan, Ying-Wooi;
Mari, Michael C.;
Andrews, Simon;
Kelsey, Gavin;
Van den Veyver, Ignatia B.

Publication type:

Article

Cell-cell communication-mediated cell-type-specific parent-of-origin effects in mammals.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-60469-y

By:

Wu, Jia-Jin;
Zheng, Enqin;
Liu, Langqing;
Quan, Jianping;
Ruan, Donglin;
Yao, Zekai;
Yang, Jifei;
Li, Xuehua;
Wang, Shiyuan;
Yang, Ming;
Zhang, Zebin;
Lin, Meng;
Xu, Zheng;
Li, Zicong;
Cai, Gengyuan;
Yang, Jie;
Wu, Zhenfang

Publication type:

Article

The Demographic History of Populations and Genomic Imprinting have Shaped the Transposon Patterns in Arabidopsis lyrataOpen Access.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 5, p. 1, doi. 10.1093/molbev/msaf093

By:

Padilla-García, Nélida;
Veve, Audrey Le;
Čermák, Vojtěch;
İltaş, Ömer;
Contreras-Garrido, Adrián;
Legrand, Sylvain;
Aury, Jean-Marc;
Horvath, Robert;
Placette, Clément Lafon

Publication type:

Article

De novo CDKN1C variant in Beckwith–Wiedermann spectrum with atypical complications.

Published in:

Human Genome Variation, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41439-025-00316-0

By:

Moriura, Yuri;
Nishio, Yosuke;
Ichimura, Shintaro;
Noda, Haruka;
Tanahashi, Yoshihiro;
Yamamoto, Hikaru;
Nakazawa, Yuka;
Oso, Taichi;
Sato, Yoshiaki;
Takenouchi, Toshiki;
Saitoh, Shinji;
Muramatsu, Yukako;
Ogi, Tomoo

Publication type:

Article

Cross-Kingdom DNA Methylation Dynamics: Comparative Mechanisms of 5mC/6mA Regulation and Their Implications in Epigenetic Disorders.

Published in:

Biology (2079-7737), 2025, v. 14, n. 5, p. 461, doi. 10.3390/biology14050461

By:

Liu, Yu;
Wang, Ying;
Bao, Dapeng;
Chen, Hongyu;
Gong, Ming;
Sun, Shujing;
Zou, Gen

Publication type:

Article

Mechanisms for U2AF to define 3′ splice sites and regulate alternative splicing in the human genome.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 11, p. 997, doi. 10.1038/nsmb.2906

By:

Shao, Changwei;
Yang, Bo;
Wu, Tongbin;
Huang, Jie;
Tang, Peng;
Zhou, Yu;
Zhou, Jie;
Qiu, Jinsong;
Jiang, Li;
Li, Hairi;
Chen, Geng;
Sun, Hui;
Zhang, Yi;
Denise, Alain;
Zhang, Dong-Er;
Fu, Xiang-Dong

Publication type:

Article

Naive pluripotency is associated with global DNA hypomethylation.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 3, p. 311, doi. 10.1038/nsmb.2510

By:

Leitch, Harry G;
McEwen, Kirsten R;
Turp, Aleksandra;
Encheva, Vesela;
Carroll, Tom;
Grabole, Nils;
Mansfield, William;
Nashun, Buhe;
Knezovich, Jaysen G;
Smith, Austin;
Surani, M Azim;
Hajkova, Petra

Publication type:

Article

Global analysis of parental imprinting in human parthenogenetic induced pluripotent stem cells.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 6, p. 735, doi. 10.1038/nsmb.2050

By:

Stelzer, Yonatan;
Yanuka, Ofra;
Benvenisty, Nissim

Publication type:

Article

Integrative Genomic Analyses Identify BRF2 as a Novel Lineage-Specific Oncogene in Lung Squamous Cell Carcinoma.

Published in:

PLoS Medicine, 2010, v. 7, n. 7, p. 1, doi. 10.1371/journal.pmed.1000315

By:

Lockwood, William W.;
Chari, Raj;
Coe, Bradley P.;
Thu, Kelsie L.;
Garnis, Cathie;
Malloff, Chad A.;
Campbell, Jennifer;
Williams, Ariane C.;
Hwang, Dorothy;
Chang-Qi Zhu;
Buys, Timon P. H.;
Yee, John;
English, John C.;
MacAulay, Calum;
Tsao, Ming-Sound;
Gazdar, Adi F.;
Minna, John D.;
Lam, Stephen;
Lam, Wan L.

Publication type:

Article

The Dawning Era of Personalized Medicine Exposes a Gap in Medical Education.

Published in:

PLoS Medicine, 2009, v. 6, n. 8, p. 1, doi. 10.1371/journal.pmed.1000138

By:

Salari, Keyan

Publication type:

Article

Survival-Related Profile, Pathways, and Transcription Factors in Ovarian Cancer.

Published in:

PLoS Medicine, 2009, v. 6, n. 2, p. e1000024

By:

de Jong, Steven;
Gerbens, Frans;
Meersma, Gert Jan;
Klip, Harry G;
Hollema, Harry;
Hofstra, Robert M. W;
Meerman, Gerard J. te;
de Vries, Elisabeth G. E;
van der Zee, Ate G. J

Publication type:

Article

NLRP7 variants in spontaneous abortions with multilocus imprinting disturbances from women with recurrent pregnancy loss.

Published in:

Journal of Assisted Reproduction & Genetics, 2021, v. 38, n. 11, p. 2893, doi. 10.1007/s10815-021-02312-z

By:

Sazhenova, Elena A.;
Nikitina, Tatyana V.;
Vasilyev, Stanislav A.;
Tolmacheva, Ekaterina N.;
Vasilyeva, Oksana Yu;
Markov, Anton V.;
Yuryev, Sergey Yu;
Skryabin, Nikolay A.;
Zarubin, Alexey A.;
Kolesnikov, Nikita A.;
Stepanov, Vadim A.;
Lebedev, Igor N.

Publication type:

Article

Sperm DNA integrity status is associated with DNA methylation signatures of imprinted genes and non-imprinted genes.

Published in:

Journal of Assisted Reproduction & Genetics, 2021, v. 38, n. 8, p. 2041, doi. 10.1007/s10815-021-02157-6

By:

Song, Bing;
Wang, Chao;
Chen, Yujie;
Li, Guanjian;
Gao, Yang;
Zhu, Fuxi;
Wu, Huan;
Lv, Mingrong;
Zhou, Ping;
Wei, Zhaolian;
He, Xiaojin;
Cao, Yunxia

Publication type:

Article

Deregulation of imprinted genes expression and epigenetic regulators in placental tissue from intrauterine growth restriction.

Published in:

Journal of Assisted Reproduction & Genetics, 2021, v. 38, n. 4, p. 791, doi. 10.1007/s10815-020-02047-3

By:

Caniçais, Carla;
Vasconcelos, Sara;
Ramalho, Carla;
Marques, C. Joana;
Dória, Sofia

Publication type:

Article

Loss of methylation of H19-imprinted gene derived from assisted reproductive technologies can be mitigated by cleavage-stage embryo transfer in mice.

Published in:

Journal of Assisted Reproduction & Genetics, 2019, v. 36, n. 11, p. 2259, doi. 10.1007/s10815-019-01575-x

By:

Chen, Shuqiang;
Zhang, Meizi;
Li, Li;
Wang, Ming;
Shi, Yongqian;
Zhang, Hengde;
Kang, Bin;
Tang, Na;
Li, Bo

Publication type:

Article

Epigenetically regulated imprinted gene expression associated with IVF and infertility: possible influence of prenatal stress and depression.

Published in:

Journal of Assisted Reproduction & Genetics, 2019, v. 36, n. 7, p. 1299, doi. 10.1007/s10815-019-01483-0

By:

Litzky, Julia F.;
Marsit, Carmen J.

Publication type:

Article

An epigenetic association of malformations, adverse reproductive outcomes, and fetal origins hypothesis related effects.

Published in:

Journal of Assisted Reproduction & Genetics, 2018, v. 35, n. 6, p. 953, doi. 10.1007/s10815-018-1197-2

By:

Lubinsky, Mark

Publication type:

Article

Comprehensive meta-analysis reveals association between multiple imprinting disorders and conception by assisted reproductive technology.

Published in:

Journal of Assisted Reproduction & Genetics, 2018, v. 35, n. 6, p. 943, doi. 10.1007/s10815-018-1173-x

By:

Cortessis, Victoria K.;
Azadian, Moosa;
Buxbaum, James;
Sanogo, Fatimata;
Song, Ashley Y.;
Sriprasert, Intira;
Wei, Pengxiao C.;
Yu, Jing;
Chung, Karine;
Siegmund, Kimberly D.

Publication type:

Article

Detection of a case of Angelman syndrome caused by an imprinting error in 949 pregnancies analyzed for AS following IVF.

Published in:

2018

By:

Johnson, John P.;
Schoof, Jonathon;
Beischel, Linda;
Schwancke, Corbin;
Goldberg, James;
Black, Lauri;
Ross, Lori;
Bhatt, Suchina

Publication type:

Case Study

Role of DNA methylation in imprinting disorders: an updated review.

Published in:

Journal of Assisted Reproduction & Genetics, 2017, v. 34, n. 5, p. 549, doi. 10.1007/s10815-017-0895-5

By:

Elhamamsy, Amr

Publication type:

Article

Relevance of genomic imprinting in intrauterine human growth expression of C DKN1C, H19, IGF2, KCNQ1 and PHLDA2 imprinted genes.

Published in:

Journal of Assisted Reproduction & Genetics, 2014, v. 31, n. 10, p. 1361, doi. 10.1007/s10815-014-0278-0

By:

Cordeiro, Amilcar;
Neto, Ana;
Carvalho, Filipa;
Ramalho, Carla;
Dória, Sofia

Publication type:

Article

Lack of association of MTHFR rs1801133 polymorphism and CTCFL mutations with sperm methylation errors in infertile patients.

Published in:

Journal of Assisted Reproduction & Genetics, 2013, v. 30, n. 9, p. 1125, doi. 10.1007/s10815-013-0013-2

By:

Camprubí, Cristina;
Pladevall, Marta;
Grossmann, Mark;
Garrido, Nicolás;
Pons, Maria;
Blanco, Joan

Publication type:

Article

Folate forever- all methyl group donations welcome!

Published in:

2013

By:

Albertini, D.

Publication type:

Editorial

Quality evaluation of IVM embryo and imprinting genes of IVM babies.

Published in:

Journal of Assisted Reproduction & Genetics, 2013, v. 30, n. 2, p. 221, doi. 10.1007/s10815-013-9945-9

By:

Yoshida, Hiroaki;
Abe, Hiroyuki;
Arima, Takahiro

Publication type:

Article

Autism, imprinting and epigenetic disorders: a metabolic syndrome linked to anomalies in homocysteine recycling starting in early life??

Published in:

2011

By:

Ménézo, Yves;
Mares, Pierre;
Cohen, Marc;
Brack, Michel;
Viville, Stephane;
Elder, Kay

Publication type:

Editorial

Genomic imprinting disorders in humans: a mini-review.

Published in:

Journal of Assisted Reproduction & Genetics, 2009, v. 26, n. 9/10, p. 477, doi. 10.1007/s10815-009-9353-3

By:

Butler, Merlin G.

Publication type:

Article

Is gestation in Prader-Willi syndrome affected by the genetic subtype?

Published in:

Journal of Assisted Reproduction & Genetics, 2009, v. 26, n. 8, p. 461, doi. 10.1007/s10815-009-9341-7

By:

Butler, Merlin G.;
Sturich, Jennifer;
Myers, Susan E.;
Gold, June-Anne;
Kimonis, Virginia;
Driscoll, Daniel J.

Publication type:

Article

Expression of the high mobility group A1 ( HMGA1) and A2 ( HMGA2) genes in canine lymphoma: analysis of 23 cases and comparison to control cases.

Published in:

Veterinary & Comparative Oncology, 2010, v. 8, n. 2, p. 87, doi. 10.1111/j.1476-5829.2010.00207.x

By:

Joetzke, A. E.;
Sterenczak, K. A.;
Eberle, N.;
Wagner, S.;
Soller, J. T.;
Nolte, I.;
Bullerdiek, J.;
Escobar, H. Murua;
Simon, D.

Publication type:

Article

Cellf Examination.

Published in:

Bio-IT World, 2005, v. 4, n. 4, p. 6

By:

Davies, Kevin

Publication type:

Article

Genomic Imprinting - der Kampf der Geschlechter auf molekularer Ebene.

Published in:

Angewandte Chemie, 2013, v. 125, n. 51, p. 13766, doi. 10.1002/ange.201307005

By:

Jurkowska, Renata Z.;
Jeltsch, Albert

Publication type:

Article

Paternal UPD14 with sSMC derived from chromosome 14 in Kagami–Ogata syndrome.

Published in:

Chromosome Research, 2023, v. 31, n. 1, p. 1, doi. 10.1007/s10577-023-09712-0

By:

Wang, Jiyong;
Lichty, Angie;
Johnson, Jill;
Couick, Chandler;
Moore, Mary Alice;
Christensen, Beth;
Howard, Khirston;
Lee, Jennifer A.;
DuPont, Barbara R.;
Clarkson, Lola;
Hilton, Benjamin A.

Publication type:

Article

Recurrent establishment of de novo centromeres in the pericentromeric region of maize chromosome 3.

Published in:

Chromosome Research, 2017, v. 25, n. 3/4, p. 299, doi. 10.1007/s10577-017-9564-x

By:

Zhao, Hainan;
Zeng, Zixian;
Koo, Dal-Hoe;
Gill, Bikram;
Birchler, James;
Jiang, Jiming

Publication type:

Article

Epigenetic detection of human chromosome 14 uniparental disomy (Communicated by Haig H. Kazazian).

Published in:

Human Mutation, 2003, v. 22, n. 1, p. 92, doi. 10.1002/humu.10237

By:

S.K. Murphy;
A.A. Wylie;
K.J. Coveler;
P.D. Cotter;
P.R. Papenhausen;
V.R. Sutton;
L.G. Shaffer;
R.L. Jirtle

Publication type:

Article

Epigenetic detection of human chromosome 14 uniparental disomyCommunicated by Haig H. Kazazian.

Published in:

Human Mutation, 2003, v. 22, n. 1, p. 92, doi. 10.1002/humu.10237

By:

S.K. Murphy;
A.A. Wylie;
K.J. Coveler;
P.D. Cotter;
P.R. Papenhausen;
V.R. Sutton;
L.G. Shaffer;
R.L. Jirtle

Publication type:

Article

Stable long-period cycling and complex dynamics in a single-locus fertility model with genomic imprinting.

Published in:

Journal of Mathematical Biology, 2008, v. 57, n. 2, p. 243, doi. 10.1007/s00285-008-0156-4

By:

Jeremy Van Cleve;
Marcus Feldman

Publication type:

Article

Joint QTL analysis of three connected F<sub>2</sub>-crosses in pigs.

Published in:

Genetics Selection Evolution, 2010, v. 42, n. 11, p. 1, doi. 10.1186/1297-9686-42-40

By:

Rückert, Christine;
Bennewitz, Jörn

Publication type:

Article

Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information.

Published in:

Genetics Selection Evolution, 2011, v. 43, n. 1, p. 1, doi. 10.1186/1297-9686-43-1

By:

Forni, Selma;
Aguilar, Ignacio;
Misztal, Ignacy

Publication type:

Article

SVmine improves structural variation detection by integrative mining of predictions from multiple algorithms.

Published in:

Bioinformatics, 2017, v. 33, n. 21, p. 3348, doi. 10.1093/bioinformatics/btx455

By:

Yuchao Xia;
Yun Liu;
Minghua Deng;
Ruibin Xi

Publication type:

Article

MBV: a method to solve sample mislabeling and detect technical bias in large combined genotype and sequencing assay datasets.

Published in:

Bioinformatics, 2017, v. 33, n. 12, p. 1895, doi. 10.1093/bioinformatics/btx074

By:

Fort, Alexandre;
Panousis, Nikolaos I.;
Garieri, Marco;
Antonarakis, Stylianos E.;
Lappalainen, Tuuli;
Dermitzakis, Emmanouil T.;
Delaneau, Olivier

Publication type:

Article

LncRNA/DNA binding analysis reveals losses and gains and lineage specificity of genomic imprinting in mammals.

Published in:

Bioinformatics, 2017, v. 33, n. 10, p. 1431, doi. 10.1093/bioinformatics/btw818

By:

Haihua Liu;
Xiaoxiao Shang;
Hao Zhu

Publication type:

Article

DeFCoM: analysis and modeling of transcription factor binding sites using a motif-centric genomic footprinter.

Published in:

Bioinformatics, 2017, v. 33, n. 7, p. 956, doi. 10.1093/bioinformatics/btw740

By:

Quach, Bryan;
Furey, Terrence S.

Publication type:

Article

NRGC: a novel referential genome compression algorithm.

Published in:

Bioinformatics, 2016, v. 32, n. 22, p. 3405, doi. 10.1093/bioinformatics/btw505

By:

Saha, Subrata;
Rajasekaran, Sanguthevar

Publication type:

Article

Variance adaptive shrinkage (vash): flexible empirical Bayes estimation of variances.

Published in:

Bioinformatics, 2016, v. 32, n. 22, p. 3428, doi. 10.1093/bioinformatics/btw483

By:

Mengyin Lu;
Stephens, Matthew

Publication type:

Article

LongTarget: a tool to predict lncRNA DNA-binding motifs and binding sites via Hoogsteen base-pairing analysis.

Published in:

Bioinformatics, 2015, v. 31, n. 2, p. 178, doi. 10.1093/bioinformatics/btu643

By:

He, Sha;
Zhang, Hai;
Liu, Haihua;
Zhu, Hao

Publication type:

Article

A powerful approach for association analysis incorporating imprinting effects.

Published in:

Bioinformatics, 2011, v. 27, n. 18, p. 2571, doi. 10.1093/bioinformatics/btr443

By:

Xia, Fan;
Zhou, Ji-Yuan;
Fung, Wing Kam

Publication type:

Article