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A draft chromosome-scale genome assembly of a commercial sugarcane.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-24823-0
By:
- Shearman, Jeremy R.;
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Yoocha, Thippawan;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- Tongsima, Sissades;
- Piriyapongsa, Jittima;
- Ngamphiw, Chumpol;
- Wanasen, Nanchaya;
- Ukoskit, Kittipat;
- Punpee, Prapat;
- Klomsa-ard, Peeraya;
- Sriroth, Klanarong;
- Zhang, Jisen;
- Zhang, Xingtan;
- Ming, Ray;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Characterization of rubber tree microRNA in phytohormone response using large genomic DNA libraries, promoter sequence and gene expression analysis.
Published in:
Molecular Genetics & Genomics, 2014, v. 289, n. 5, p. 921, doi. 10.1007/s00438-014-0862-0
By:
- Kanjanawattanawong, Supanath;
- Tangphatsornruang, Sithichoke;
- Triwitayakorn, Kanokporn;
- Ruang-areerate, Panthita;
- Sangsrakru, Duangjai;
- Poopear, Supannee;
- Somyong, Suthasinee;
- Narangajavana, Jarunya
Publication type:
Article
De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species.
Published in:
Scientific Reports, 2017, p. 41457, doi. 10.1038/srep41457
By:
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Ruang-Areerate, Panthita;
- Yoocha, Thippawan;
- Sangsrakru, Duangjai;
- Theerawattanasuk, Kanikar;
- Rattanawong, Ratchanee;
- Lekawipat, Napawan;
- Tangphatsornruang, Sithichoke
Publication type:
Article
The two chromosomes of the mitochondrial genome of a sugarcane cultivar: assembly and recombination analysis using long PacBio reads.
Published in:
Scientific Reports, 2016, p. 31533, doi. 10.1038/srep31533
By:
- Shearman, Jeremy R.;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Pootakham, Wirulda;
- Yoocha, Thippawan;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Genome assemblies of Vigna reflexo-pilosa (créole bean) and its progenitors, Vigna hirtella and Vigna trinervia, revealed homoeolog expression bias and expression-level dominance in the allotetraploid.
Published in:
GigaScience, 2023, v. 12, n. 1, p. 1, doi. 10.1093/gigascience/giad050
By:
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Yundaeng, Chutintorn;
- Yoocha, Thippawan;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- Somta, Prakit;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Chromosome‐level genome assembly of Indian mangrove (Ceriops tagal) revealed a genome‐wide duplication event predating the divergence of Rhizophoraceae mangrove species.
Published in:
Plant Genome, 2022, v. 15, n. 3, p. 1, doi. 10.1002/tpg2.20217
By:
- Pootakham, Wirulda;
- Naktang, Chaiwat;
- Sonthirod, Chutima;
- Kongkachana, Wasitthee;
- Narong, Nattapol;
- Sangsrakru, Duangjai;
- Maknual, Chatree;
- Jiumjamrassil, Darunee;
- Chumriang, Pranom;
- Tangphatsornruang, Sithichoke
Publication type:
Article
SNP Identification from RNA Sequencing and Linkage Map Construction of Rubber Tree for Anchoring the Draft Genome.
Published in:
PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0121961
By:
- Shearman, Jeremy R.;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- Ruang-areerate, Panthita;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Theerawattanasuk, Kanikar;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Large-Scale SNP Discovery through RNA Sequencing and SNP Genotyping by Targeted Enrichment Sequencing in Cassava (Manihot esculenta Crantz).
Published in:
PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0116028
By:
- Pootakham, Wirulda;
- Shearman, Jeremy R.;
- Ruang-areerate, Panthita;
- Sonthirod, Chutima;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- Yoocha, Thippawan;
- Triwitayakorn, Kanokporn;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Microbial Ecology of Thailand Tsunami and Non-Tsunami Affected Terrestrials.
Published in:
PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0094236
By:
- Somboonna, Naraporn;
- Wilantho, Alisa;
- Jankaew, Kruawun;
- Assawamakin, Anunchai;
- Sangsrakru, Duangjai;
- Tangphatsornruang, Sithichoke;
- Tongsima, Sissades
Publication type:
Article
Assembly and analysis of a male sterile rubber tree mitochondrial genome reveals DNA rearrangement events and a novel transcript.
Published in:
BMC Plant Biology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2229-14-45
By:
- Shearman, Jeremy R.;
- Sangsrakru, Duangjai;
- Ruang-areerate, Panthita;
- Sonthirod, Chutima;
- Uthaipaisanwong, Pichapuk;
- Yoocha, Thippawan;
- Poopear, Supannee;
- Theerawattanasuk, Kanikar;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
The AKR gene family and modifying sex ratios in palms through abiotic stress responsiveness.
Published in:
Functional & Integrative Genomics, 2015, v. 15, n. 3, p. 349, doi. 10.1007/s10142-014-0423-y
By:
- Somyong, Suthasinee;
- Poopear, Supannee;
- Jomchai, Nukoon;
- Uthaipaisanwong, Pichahpuk;
- Ruang-areerate, Panthita;
- Sangsrakru, Duangjai;
- Sonthirod, Chutima;
- Ukoskit, Kittipat;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
The Fungus Metarhizium sp. BCC 4849 Is an Effective and Safe Mycoinsecticide for the Management of Spider Mites and Other Insect Pests.
Published in:
Insects (2075-4450), 2022, v. 13, n. 1, p. 42, doi. 10.3390/insects13010042
By:
- Wasuwan, Rudsamee;
- Phosrithong, Natnapha;
- Promdonkoy, Boonhiang;
- Sangsrakru, Duangjai;
- Sonthirod, Chutima;
- Tangphatsornruang, Sithichoke;
- Likhitrattanapisal, Somsak;
- Ingsriswang, Supawadee;
- Srisuksam, Chettida;
- Klamchao, Kewarin;
- Suksangpanomrung, Malinee;
- Hleepongpanich, Thipmanee;
- Reungpatthanaphong, Sareeya;
- Tanticharoen, Morakot;
- Amnuaykanjanasin, Alongkorn
Publication type:
Article
Author Correction: Transcriptome analyses reveal the synergistic effects of feeding and eyestalk ablation on ovarian maturation in black tiger shrimp.
Published in:
2020
By:
- Sittikankaew, Kanchana;
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Khudet, Jutatip;
- Nookaew, Intawat;
- Uawisetwathana, Umaporn;
- Rungrassamee, Wanilada;
- Karoonuthaisiri, Nitsara
Publication type:
Correction Notice
Transcriptome analyses reveal the synergistic effects of feeding and eyestalk ablation on ovarian maturation in black tiger shrimp.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-60192-2
By:
- Sittikankaew, Kanchana;
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Khudet, Jutatip;
- Nookeaw, Intawat;
- Uawisetwathana, Umaporn;
- Rungrassamee, Wanilada;
- Karoonuthaisiri, Nitsara
Publication type:
Article
SINGLE NUCLEOTIDE POLYMORPHISM MARKER DEVELOPMENT IN THE RUBBER TREE, HEVEA BRASILIENSIS (EUPHORBIACEAE ).
Published in:
American Journal of Botany, 2011, v. 98, n. 11, p. e337, doi. 10.3732/ajb.1100228
By:
- POOTAKHAM, WIRULDA;
- CHANPRASERT, JUNTIMA;
- JOMCHAI, NUKOON;
- SANGSRAKRU, DUANGJAI;
- YOOCHA, THIPPAWAN;
- THERAWATTANASUK, KANIKAR;
- TANGPHATSORNRUANG, SITHICHOKE
Publication type:
Article
Differences in transcriptomic responses upon Phytophthora palmivora infection among cultivars reveal potential underlying resistant mechanisms in durian.
Published in:
BMC Plant Biology, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12870-024-05545-z
By:
- Nawae, Wanapinun;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Pinsupa, Suparat;
- Phetchawang, Phakamas;
- Bua-art, Sureeporn;
- Chusri, Orwintinee;
- Tangphatsornruang, Sithichoke;
- Pootakham, Wirulda
Publication type:
Article
Dynamics of coral‐associated microbiomes during a thermal bleaching event.
Published in:
MicrobiologyOpen, 2018, v. 7, n. 5, p. N.PAG, doi. 10.1002/mbo3.604
By:
- Pootakham, Wirulda;
- Mhuantong, Wuttichai;
- Putchim, Lalita;
- Yoocha, Thippawan;
- Sonthirod, Chutima;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- Naktang, Chaiwat;
- Jomchai, Nukoon;
- Thongtham, Nalinee;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Assembly of the durian chloroplast genome using long PacBio reads.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-73549-4
By:
- Shearman, Jeremy R.;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Chatbanyong, Ratchanee;
- Vorakuldumrongchai, Siriporn;
- Chusri, Orwintinee;
- Tangphatsornruang, Sithichoke;
- Pootakham, Wirulda
Publication type:
Article
Assessment of the Genetic Diversity and Population Structure of Rhizophora apiculata Blume (Rhizophoraceae) in Thailand.
Published in:
Biology (2079-7737), 2022, v. 11, n. 10, p. N.PAG, doi. 10.3390/biology11101449
By:
- Ruang-areerate, Panthita;
- Naktang, Chaiwat;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- Narong, Nattapol;
- Maknual, Chatree;
- Pravinvongvuthi, Tamanai;
- Promchoo, Waratthaya;
- Yamprasai, Suchart;
- Tangphatsornruang, Sithichoke;
- Pootakham, Wirulda
Publication type:
Article
Genetic diversity of the dengue virus population in dengue fever and dengue hemorrhagic fever patients.
Published in:
Asian Pacific Journal of Allergy & Immunology, 2023, v. 41, n. 4, p. 361, doi. 10.12932/ap-230620-0887
By:
- Chin-inmanu, Kwanrutai;
- Dumrong Mairiang;
- Khongthon, Phongphak;
- Sangsrakru, Duangjai;
- Tangphatsornruang, Sithichoke;
- Tangthawornchaiku, Nattaya;
- Malasit, Prida;
- Suriyaphol, Prapat
Publication type:
Article
Effects of methylation-sensitive enzymes on the enrichment of genic SNPs and the degree of genome complexity reduction in a two-enzyme genotyping-by-sequencing (GBS) approach: a case study in oil palm (Elaeis guineensis)
Published in:
Molecular Breeding, 2016, v. 36, n. 11, p. 1, doi. 10.1007/s11032-016-0572-x
By:
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Jomchai, Nukoon;
- Sangsrakru, Duangjai;
- Tangphatsornruang, Sithichoke
Publication type:
Article
A SNP variation in an expansin (EgExp4) gene affects height in oil palm.
Published in:
PeerJ, 2022, p. 1, doi. 10.7717/peerj.13046
By:
- Somyong, Suthasinee;
- Phetchawang, Phakamas;
- Bihi, Abdulloh Kafa;
- Sonthirod, Chutima;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- Pootakham, Wirulda;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Optimization of high molecular weight DNA extraction methods in shrimp for a long-read sequencing platform.
Published in:
PeerJ, 2020, p. 1, doi. 10.7717/peerj.10340
By:
- Angthong, Pacharaporn;
- Uengwetwanit, Tanaporn;
- Pootakham, Wirulda;
- Sittikankaew, Kanchana;
- Sonthirod, Chutima;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Nookaew, Intawat;
- Wongsurawat, Thidathip;
- Jenjaroenpun, Piroon;
- Rungrassamee, Wanilada;
- Karoonuthaisiri, Nitsara
Publication type:
Article
Differential expression between drought-tolerant and drought-sensitive sugarcane under mild and moderate water stress as revealed by a comparative analysis of leaf transcriptome.
Published in:
PeerJ, 2020, p. 1, doi. 10.7717/peerj.9608
By:
- Nawae, Wanapinun;
- Shearman, Jeremy R.;
- Tangphatsornruang, Sithichoke;
- Punpee, Prapat;
- Thippawan Yoocha;
- Duangjai Sangsrakru;
- Chaiwat Naktang;
- Sonthirod, Chutima;
- Wirojsirasak, Warodom;
- Kittipat Ukoskit;
- Klanarong Sriroth;
- Klomsa-ard, Peeraya;
- Pootakham, Wirulda
Publication type:
Article
Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing.
Published in:
PeerJ, 2018, p. 1, doi. 10.7717/peerj.5818
By:
- Jittima Piriyapongsa;
- Pavita Kaewprommal;
- Sirintra Vaiwsri;
- Songtham Anuntakarun;
- Warodom Wirojsirasak;
- Prapat Punpee;
- Peeraya Klomsa-ard;
- Shaw, Philip J.;
- Wirulda Pootakham;
- Thippawan Yoocha;
- Duangjai Sangsrakru;
- Sithichoke Tangphatsornruang;
- Sissades Tongsima;
- Somvong Tragoonrung
Publication type:
Article
Development and characterization of single-nucleotide polymorphism markers from 454 transcriptome sequences in oil palm ( Elaeis guineensis).
Published in:
Plant Breeding, 2013, v. 132, n. 6, p. 711, doi. 10.1111/pbr.12095
By:
- Pootakham, Wirulda;
- Uthaipaisanwong, Pichahpuk;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke;
- Prasad, M.
Publication type:
Article
Development of genomic-derived simple sequence repeat markers in Hevea brasiliensis from 454 genome shotgun sequences.
Published in:
Plant Breeding, 2012, v. 131, n. 4, p. 555, doi. 10.1111/j.1439-0523.2012.01982.x
By:
- Pootakham, Wirulda;
- Chanprasert, Juntima;
- Jomchai, Nukoon;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
A chromosome‐scale reference genome assembly of yellow mangrove (Bruguiera parviflora) reveals a whole genome duplication event associated with the Rhizophoraceae lineage.
Published in:
Molecular Ecology Resources, 2022, v. 22, n. 5, p. 1939, doi. 10.1111/1755-0998.13587
By:
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- U‐thoomporn, Sonicha;
- Maknual, Chatree;
- Meepol, Wijarn;
- Promchoo, Waratthaya;
- Maprasop, Pasin;
- Phormsin, Nawin;
- Tangphatsornruang, Sithichoke
Publication type:
Article
A chromosome‐level assembly of the black tiger shrimp (Penaeus monodon) genome facilitates the identification of growth‐associated genes.
Published in:
Molecular Ecology Resources, 2021, v. 21, n. 5, p. 1620, doi. 10.1111/1755-0998.13357
By:
- Uengwetwanit, Tanaporn;
- Pootakham, Wirulda;
- Nookaew, Intawat;
- Sonthirod, Chutima;
- Angthong, Pacharaporn;
- Sittikankaew, Kanchana;
- Rungrassamee, Wanilada;
- Arayamethakorn, Sopacha;
- Wongsurawat, Thidathip;
- Jenjaroenpun, Piroon;
- Sangsrakru, Duangjai;
- Leelatanawit, Rungnapa;
- Khudet, Jutatip;
- Koehorst, Jasper J.;
- Schaap, Peter J.;
- Martins dos Santos, Vitor;
- Tangy, Frédéric;
- Karoonuthaisiri, Nitsara
Publication type:
Article
A chromosome‐scale assembly of the black gram (Vigna mungo) genome.
Published in:
Molecular Ecology Resources, 2021, v. 21, n. 1, p. 238, doi. 10.1111/1755-0998.13243
By:
- Pootakham, Wirulda;
- Nawae, Wanapinun;
- Naktang, Chaiwat;
- Sonthirod, Chutima;
- Yoocha, Thippawan;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- U‐thoomporn, Sonicha;
- Somta, Prakit;
- Laosatit, Kularb;
- Tangphatsornruang, Sithichoke
Publication type:
Article
De novo assemblies of Luffa acutangula and Luffa cylindrica genomes reveal an expansion associated with substantial accumulation of transposable elements.
Published in:
Molecular Ecology Resources, 2021, v. 21, n. 1, p. 212, doi. 10.1111/1755-0998.13240
By:
- Pootakham, Wirulda;
- Sonthirod, Chutima;
- Naktang, Chaiwat;
- Nawae, Wanapinun;
- Yoocha, Thippawan;
- Kongkachana, Wasitthee;
- Sangsrakru, Duangjai;
- Jomchai, Nukoon;
- U‐thoomporn, Sonicha;
- Sheedy, John R.;
- Buaboocha, Jarunee;
- Mekiyanon, Supat;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Structural and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 607, doi. 10.1186/1471-2164-15-607
By:
- Naraporn Somboonna;
- Alisa Wilantho;
- Anunchai Assawamakin;
- Somchai Monanunsap;
- Duangjai Sangsrakru;
- Sithichoke Tangphatsornruang;
- Sissades Tongsima
Publication type:
Article
Feasibility of using 454 pyrosequencing for studying quasispecies of the whole dengue viral genome.
Published in:
BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S7
By:
- Chin-inmanu, Kwanrutai;
- Suttitheptumrong, Aroonroong;
- Sangsrakru, Duangjai;
- Tangphatsornruang, Sithichoke;
- Tragoonrung, Somvong;
- Malasit, Prida;
- Tungpradabkul, Sumalee;
- Suriyaphol, Prapat
Publication type:
Article
Construction of a high-density integrated genetic linkage map of rubber tree (Hevea brasiliensis) using genotyping-by-sequencing (GBS).
Published in:
Frontiers in Plant Science, 2015, p. 1, doi. 10.3389/fpls.2015.00367
By:
- Pootakham, Wirulda;
- Ruang-Areerate, Panthita;
- Jomchai, Nukoon;
- Sonthirod, Chutima;
- Sangsrakru, Duangjai;
- Yoocha, Thippawan;
- Theerawattanasuk, Kanikar;
- Nirapathpongporn, Kanlaya;
- Romruensukharom, Phayao;
- Tragoonrung, Somvong;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Elucidation of the molecular responses to waterlogging in Jatropha roots by transcriptome profiling.
Published in:
Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00658
By:
- Piyada Juntawong;
- Anchalee Sirikhachornkit;
- Rachaneeporn Pimjan;
- Chutima Sonthirod;
- Duangjai Sangsrakru;
- Thippawan Yoocha;
- Sithichoke Tangphatsornruang;
- Peerasak Srinives
Publication type:
Article
Elucidating SNP-Based Population Structure and Genetic Diversity of Bruguiera gymnorhiza (L.) Savigny in Thailand.
Published in:
Forests (19994907), 2023, v. 14, n. 4, p. 693, doi. 10.3390/f14040693
By:
- Ruang-areerate, Panthita;
- Sonthirod, Chutima;
- Sangsrakru, Duangjai;
- Waiyamitra, Pitchaporn;
- Maknual, Chatree;
- Wanthongchai, Poonsri;
- Chomriang, Pranom;
- Pootakham, Wirulda;
- Tangphatsornruang, Sithichoke
Publication type:
Article
Transcriptome Sequencing of Hevea brasiliensis for Development of Microsatellite Markers and Construction of a Genetic Linkage Map.
Published in:
DNA Research, 2011, v. 18, n. 6, p. 471, doi. 10.1093/dnares/dsr034
By:
- Triwitayakorn, Kanokporn;
- Chatkulkawin, Pornsupa;
- Kanjanawattanawong, Supanath;
- Sraphet, Supajit;
- Yoocha, Thippawan;
- Sangsrakru, Duangjai;
- Chanprasert, Juntima;
- Ngamphiw, Chumpol;
- Jomchai, Nukoon;
- Therawattanasuk, Kanikar;
- Tangphatsornruang, Sithichoke
Publication type:
Article

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