Works matching Genome walking

Results: 388

Partially Overlapping Primer-Based PCR for Genome Walking.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0120139

By:

Li, Haixing;
Ding, Dongqin;
Cao, Yusheng;
Yu, Bo;
Guo, Liang;
Liu, Xiaohua

Publication type:

Article

Faster, safer, and better DNA purification by ultracentrifugation using GelRed stain and development of mismatch oligo DNA for genome walking.

Published in:

Bioscience, Biotechnology & Biochemistry, 2014, v. 78, n. 11, p. 1902, doi. 10.1080/09168451.2014.940831

By:

Ichiro Kasajima;
Norihiro Ohtsubo;
Katsutomo Sasaki

Publication type:

Article

Optimization of a genome-walking method to suit GC-rich template DNA from biotechnological relevant Actinobacteria.

Published in:

Journal of Basic Microbiology, 2010, v. 50, n. 5, p. 499, doi. 10.1002/jobm.201000032

By:

Gröning, Janosch A. D.;
Tischler, Dirk;
Kaschabek, Stefan R.;
Schlömann, Michael

Publication type:

Article

Efficient amplification of genes involved in microbial secondary metabolism by an improved genome walking method.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 2, p. 757, doi. 10.1007/s00253-010-2569-4

By:

Jing Deng;
Maochen Wei;
Boyang Yu;
Yijun Chen

Publication type:

Article

Primer extension refractory PCR: an efficient and reliable genome walking method.

Published in:

Molecular Genetics & Genomics, 2024, v. 299, n. 1, p. 1, doi. 10.1007/s00438-024-02126-5

By:

Li, Haixing;
Lin, Zhiyu;
Guo, Xinyue;
Pan, Zhenkang;
Pan, Hao;
Wang, Dongying

Publication type:

Article

High Expression Level of mok E Enhances the Production of Monacolin K in Monascus.

Published in:

Food Biotechnology, 2018, v. 32, n. 1, p. 35, doi. 10.1080/08905436.2017.1413985

By:

Lin, Lin;
Wu, Shufen;
Li, Zhenjing;
Ren, Zhiyuan;
Chen, Mianhua;
Wang, Changlu

Publication type:

Article

Linear and exponential TAIL-PCR: a method for efficient and quick amplification of flanking sequences adjacent to Tn5 transposon insertion sites.

Published in:

AMB Express, 2017, v. 7, n. 1, p. 1, doi. 10.1186/s13568-017-0495-x

By:

Jia, Xianbo;
Lin, Xinjian;
Chen, Jichen

Publication type:

Article

Genome Walking by Next Generation Sequencing Approaches.

Published in:

Biology (2079-7737), 2012, v. 1, n. 3, p. 495, doi. 10.3390/biology1030495

By:

Volpicella, Mariateresa;
Leoni, Claudia;
Costanza, Alessandra;
Fanizza, Immacolata;
Placido, Antonio;
Ceci, Luigi R.

Publication type:

Article

Fork PCR: a universal and efficient genome-walking tool.

Published in:

Frontiers in Microbiology, 2023, p. 01, doi. 10.3389/fmicb.2023.1265580

By:

Hao Pan;
Xinyue Guo;
Zhenkang Pan;
Rongrong Wang;
Bingkun Tian;
Haixing Li

Publication type:

Article

Fusion primer driven racket PCR: A novel tool for genome walking.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 01, doi. 10.3389/fgene.2022.969840

By:

Jinfeng Pei;
Tianyi Sun;
Lingqin Wang;
Zhenkang Pan;
Xinyue Guo;
Haixing Li

Publication type:

Article

N<sub>7</sub>-Ended Walker PCR: An Efficient Genome-Walking Tool.

Published in:

Biochemical Genetics, 2025, v. 63, n. 4, p. 3758, doi. 10.1007/s10528-024-10896-1

By:

Tian, Bingkun;
Wu, Hongjing;
Wang, Rongrong;
Chen, Hong;
Li, Haixing

Publication type:

Article

A Primer-Based Approach to Genome Walking.

Published in:

Plant Molecular Biology Reporter, 2006, v. 24, n. 2, p. 237, doi. 10.1007/BF02914062

By:

Ashoub, Ahmed;
Abdalla, Khaled S.

Publication type:

Article

Loop-linker PCR: An advanced PCR technique for genome walking.

Published in:

IUBMB Life, 2012, v. 64, n. 10, p. 841, doi. 10.1002/iub.1069

By:

Trinh, Quoclinh;
Shi, Hui;
Xu, Wentao;
Hao, Junran;
Luo, Yunbo;
Huang, Kunlun

Publication type:

Article

A genome walking strategy for the identification of nucleotide sequences adjacent to known regions.

Published in:

Biotechnology Letters, 2013, v. 35, n. 2, p. 279, doi. 10.1007/s10529-012-1076-3

By:

Wang, Hailong;
Yao, Ting;
Cai, Mei;
Xiao, Xiuqing;
Ding, Xuezhi;
Xia, Liqiu

Publication type:

Article

LT-RADE: An Efficient User-Friendly Genome Walking Method Applied to the Molecular Characterization of the Insertion Site of Genetically Modified Maize MON810 and Rice LLRICE62.

Published in:

Food Analytical Methods, 2013, v. 6, n. 2, p. 705, doi. 10.1007/s12161-012-9438-y

By:

Spalinskas, R.;
Bulcke, M.;
Eede, G.;
Milcamps, Anne

Publication type:

Article

Generation and mapping of SCAR and CAPS markers linked to the seed coat color gene in Brassica napus using a genome-walking technique.

Published in:

Genome, 2007, v. 50, n. 7, p. 611, doi. 10.1139/G07-044

By:

Shushu Xiao;
Jinsong Xu;
Yuan Li;
Lei Zhang;
Shijun Shi;
Shuwen Shi;
Jiangsheng Wu;
Kede Liu

Publication type:

Article

Stepwise partially overlapping primer-based PCR for genome walking.

Published in:

AMB Express, 2018, v. 8, n. 1, p. 1, doi. 10.1186/s13568-018-0610-7

By:

Chang, Kunpeng;
Wang, Qiong;
Shi, Xiaofei;
Wang, Shuixing;
Wu, Hongjing;
Nie, Lijuan;
Li, Haixing

Publication type:

Article

Molecular Cloning and Structure-Function Analysis of a Trypsin Inhibitor from Tartary Buckwheat and Its Application in Combating Phytopathogenic Fungi.

Published in:

Agronomy, 2018, v. 8, n. 4, p. 46, doi. 10.3390/agronomy8040046

By:

Jing-jun Ruan;
Shan-jun Tian;
Jun Yan;
Hui Chen;
Ru-hong Xu;
Jian-ping Cheng

Publication type:

Article

Randomly broken fragment PCR with 5' end-directed adaptor for genome walking.

Published in:

Scientific Reports, 2013, p. 1, doi. 10.1038/srep03465

By:

Wentao Xu;
Ying Shang;
Pengyu Zhu;
Zhifang Zhai;
Jing He;
Kunlun Huang;
Yunbo Luo

Publication type:

Article

Isolating promoters of multigene family members from the polyploid sugarcane genome by PCR-based walking in BAC DNA.

Published in:

Genome, 2010, v. 53, n. 10, p. 840

By:

Damaj, Mona B.;
Beremand, Phillip D.;
Buenrostro-Nava, Marco T.;
Ivy, John;
Kumpatla, Siva P.;
Jifon, John;
Beyene, Getu;
Yu, Qingyi;
Thomas, Terry L.;
Mirkov, T. Erik

Publication type:

Article

Palindromic sequence-targeted (PST) PCR: a rapid and efficient method for high-throughput gene characterization and genome walking.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-54168-0

By:

Kalendar, Ruslan;
Shustov, Alexandr V.;
Seppänen, Mervi M.;
Schulman, Alan H.;
Stoddard, Frederick L.

Publication type:

Article

Genome sequence of walking catfish (Clarias batrachus) provides insights into terrestrial adaptation.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5355-9

By:

Li, Ning;
Bao, Lisui;
Zhou, Tao;
Yuan, Zihao;
Liu, Shikai;
Dunham, Rex;
Li, Yuanning;
Wang, Kun;
Xu, Xiaoyan;
Jin, Yulin;
Zeng, Qifan;
Gao, Sen;
Fu, Qiang;
Liu, Yang;
Yang, Yujia;
Li, Qi;
Meyer, Axel;
Gao, Dongya;
Liu, Zhanjiang

Publication type:

Article

Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato.

Published in:

Plant Cell Reports, 2018, v. 37, n. 9, p. 1257, doi. 10.1007/s00299-018-2310-9

By:

Quintero, Fabíola OCampo;
Pinto, Layra G.;
Barsalobres-Cavallari, Carla F.;
Arcuri, Mariana de Lara Campos;
Pino, Lilian Ellen;
Peres, Lázaro Eustáquio Pereira;
Maluf, Mirian P.;
Maia, Ivan G.

Publication type:

Article

Development of event-specific qualitative and quantitative PCR detection methods for the transgenic maize BVLA430101.

Published in:

European Food Research & Technology, 2016, v. 242, n. 8, p. 1277, doi. 10.1007/s00217-015-2631-7

By:

Rao, Jun;
Yang, Litao;
Guo, Jinchao;
Quan, Sheng;
Chen, Guihua;
Zhao, Xiangxiang;
Zhang, Dabing;
Shi, Jianxin

Publication type:

Article

The Draft Genome of the Invasive Walking Stick, Medauroidea extradendata, Reveals Extensive Lineage-Specific Gene Family Expansions of Cell Wall Degrading Enzymes in Phasmatodea.

Published in:

G3: Genes | Genomes | Genetics, 2018, v. 8, n. 5, p. 1403, doi. 10.1534/g3.118.200204

By:

Brand, Philipp;
Wei Lin;
Johnson, Brian R.

Publication type:

Article

Revised Selection Criteria for Candidate Restriction Enzymes in Genome Walking.

Published in:

PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0035117

By:

Taheri, Ali;
Robinson, Stephen J.;
Parkin, Isobel;
Gruber, Margaret Y.

Publication type:

Article

popSTR: population-scale detection of STR variants.

Published in:

Bioinformatics, 2017, v. 33, n. 24, p. 4041, doi. 10.1093/bioinformatics/btw568

By:

Kristmundsdóttir, Snædís;
Sigurpálsdóttir, Brynja D.;
Kehr, Birte;
Halldórsson, Bjarni V.

Publication type:

Article

RUCS: rapid identification of PCR primers for unique core sequences.

Published in:

Bioinformatics, 2017, v. 33, n. 24, p. 3917, doi. 10.1093/bioinformatics/btx526

By:

Thomsen, Martin Christen Frølund;
Hasman, Henrik;
Westh, Henrik;
Kaya, Hülya;
Lund, Ole

Publication type:

Article

ReliableGenome: annotation of genomic regions with high/low variant calling concordance.

Published in:

Bioinformatics, 2017, v. 33, n. 2, p. 155, doi. 10.1093/bioinformatics/btw587

By:

Popitsch, Niko;
Schuh, Anna;
Taylor, Jenny C.

Publication type:

Article

PrimerDesign-M: a multiple-alignment based multiple-primer design tool for walking across variable genomes.

Published in:

2015

By:

Hyejin Yoon;
Leitner, Thomas

Publication type:

Product Review

Lessons from genome skimming of arthropod-preserving ethanol.

Published in:

Molecular Ecology Resources, 2016, v. 16, n. 6, p. 1365, doi. 10.1111/1755-0998.12539

By:

Linard, B.;
Arribas, P.;
Andújar, C.;
Crampton ‐ Platt, A.;
Vogler, A. P.

Publication type:

Article

More data than you can imagine.

Published in:

EE: Evaluation Engineering, 2015, v. 54, n. 5, p. 20

By:

Lecklider, Tom

Publication type:

Article

PCR Genome Walking Identifies a Genetic Locus Comprising Two Heat Shock Genes (hslV and hslU) from Leptospira borgpetersenii Serovar Hardjobovis.

Published in:

Current Microbiology, 2001, v. 43, n. 6, p. 452, doi. 10.1007/s002840010338

By:

Lin, Min;
Li, Yijing

Publication type:

Article

Genome sequences of a capulavirus infecting Plantago lanceolata in the Åland archipelago of Finland.

Published in:

2017

By:

Susi, Hanna;
Laine, Anna-Liisa;
Filloux, Denis;
Kraberger, Simona;
Farkas, Kata;
Bernardo, Pauline;
Frilander, Mikko;
Martin, Darren;
Varsani, Arvind;
Roumagnac, Philippe

Publication type:

Report

Editorial: Marching Toward 100% Whole Genome Sequencing.

Published in:

Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00041

By:

Yih-Horng Shiao

Publication type:

Article

A PCR-RFLP Assay targeting RPS8 gene for the discrimination between bovine Babesia and Theileria species in China.

Published in:

Parasites & Vectors, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13071-015-1085-x

By:

Zhancheng Tian;
Junzheng Du;
Jifei Yang;
Aihong Liu;
Xiaocui Liu;
Guangyuan Liu;
Hong Yin

Publication type:

Article

Isolation and Characterization of DBR2 Gene Promoter from Iranian Artemisia annua.

Published in:

Journal of Agricultural Science & Technology, 2014, v. 16, n. 1, p. 191

By:

Sarvestani, R.;
Peyghambary, S. A.;
Abbasi, A.

Publication type:

Article

A defining decade in DNA sequencing.

Published in:

Nature Methods, 2014, v. 11, n. 10, p. 1003, doi. 10.1038/nmeth.3106

By:

McPherson, John D

Publication type:

Article

SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0726-6

By:

Stadermann, Kai Bernd;
Weisshaar, Bernd;
Holtgräwe, Daniela

Publication type:

Article

Tracembler -- software for in-silico chromosome walking inunassembled genomes.

Published in:: BMC Bioinformatics, 2007, v. 8, p. 151, doi. 10.1186/1471-2105-8-151
Publication type:: Article

Isolation of Ty1-copia-like Retrotransposon Sequences from the Apple Genome by Chromosome Walking Based on Modified SiteFinding-polymerase Chain Reaction.

Published in:

Acta Biochimica et Biophysica Sinica, 2007, v. 39, n. 9, p. 675, doi. 10.1111/j.1745-7270.2007.00328.x

By:

ZHAO, Guiling;
ZHANG, Zhihong;
SUN, Haiyue;
LI, He;
DAI, Hongyan

Publication type:

Article

假单胞菌亮氨酸氨肽酶基因克隆及生物信息学分析.

Published in:

Journal of Guangxi Normal University - Natural Science Edition, 2021, v. 39, n. 1, p. 156, doi. 10.16088/j.issn.1001-6600.2020083102

By:

郭辰;
周飞;
韩彪;
潘翠;
吴洁敏;
杨婷;
尚常花

Publication type:

Article

Identification of micro RNAs and their mRNA targets during soybean nodule development: functional analysis of the role of miR393j-3p in soybean nodulation.

Published in:

New Phytologist, 2015, v. 207, n. 3, p. 748, doi. 10.1111/nph.13365

By:

Yan, Zhe;
Hossain, Md Shakhawat;
Arikit, Siwaret;
Valdés‐López, Oswaldo;
Zhai, Jixian;
Wang, Jun;
Libault, Marc;
Ji, Tieming;
Qiu, Lijuan;
Meyers, Blake C.;
Stacey, Gary

Publication type:

Article

Draft genome sequence of Staphylococcus sp. EZ-P03 isolated from a mesophilic anaerobic digester.

Published in:

BMC Research Notes, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13104-018-3784-9

By:

Ziganshina, Elvira E.;
Mohammed, Waleed S.;
Shagimardanova, Elena I.;
Shigapova, Leyla H.;
Ziganshin, Ayrat M.

Publication type:

Article

Two large-insert soybean genomic libraries constructed in a binary vector: applications in chromosome walking and genome wide physical mapping.

Published in:

Theoretical & Applied Genetics, 2000, v. 101, n. 5/6, p. 747, doi. 10.1007/s001220051540

By:

Meksem, K.;
Zobrist, K.;
Ruben, E.;
Hyten, D.;
Quanzhou, T.;
Zhang, H-B.;
Lightfoot, D. A.

Publication type:

Article

Genetic diversity of three classes of integrons in antibiotic-resistant bacteria isolated from Jiulong River in southern China.

Published in:

Environmental Science & Pollution Research, 2015, v. 22, n. 15, p. 11930, doi. 10.1007/s11356-015-4480-0

By:

Lin, Mao;
Liang, Jingjing;
Zhang, Xian;
Wu, Xiaomei;
Yan, Qingpi;
Luo, Zhuanxi

Publication type:

Article

Molecular Detection of TYLCV Isolates from Xinjiang Autonomous Region of China and Analysis of Its DNA-A Genome Sequences.

Published in:

Plant Diseases & Pests, 2013, v. 4, n. 6, p. 1

By:

Ding Yingna;
Li Shifang;
Zhang Sheng;
Cui Yuanyu;
Yang Hua;
He Wei;
Sun Xiaojun

Publication type:

Article

Walking Together: Cross-Protection, Genome Conservation, and the Replication Machinery of Citrus tristeza virus.

Published in:

Viruses (1999-4915), 2020, v. 12, n. 12, p. 1353, doi. 10.3390/v12121353

By:

Folimonova, Svetlana Y.;
Achor, Diann;
Bar-Joseph, Moshe;
Lemaire, Olivier;
Herrbach, Etienne

Publication type:

Article

In search of perfect reads.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S17-S7

By:

Pal, Soumitra;
Aluru, Srinivas

Publication type:

Article

Characterization of a gene regulating antibiotic production in <italic>Bacillus subtilis</italic> BSD-2.

Published in:

Biotechnology & Biotechnological Equipment, 2018, v. 32, n. 2, p. 332, doi. 10.1080/13102818.2017.1329633

By:

Liu, Hongwei;
Fan, Xing;
Cheng, Huicai;
Yin, Shuli;
Zhang, Genwei;
Xi, Yanhua;
An, Likang;
Zhang, Liping

Publication type:

Article