Works matching RNA world hypothesis

Results: 197

The RNA world hypothesis: the worst theory of the early evolution of life (except for all the others)a.

Published in:

Biology Direct, 2012, v. 7, n. 1, p. 23, doi. 10.1186/1745-6150-7-23

By:

Bernhardt, Harold S.

Publication type:

Article

The Old and New RNA World.

Published in:

Acta Societatis Botanicorum Poloniae, 2014, v. 83, n. 4, p. 441, doi. 10.5586/asbp.2014.035

By:

Szweykowska-Kulińska, Zofia

Publication type:

Article

A Hypothesis: Life Initiated from Two Genes, as Deduced from the RNA World Hypothesis and the Characteristics of Life-Like Systems.

Published in:

Life (2075-1729), 2016, v. 6, n. 3, p. 29, doi. 10.3390/life6030029

By:

Kunio Kawamura

Publication type:

Article

The Juxtaposition of Ribose Hydroxyl Groups: The Root of Biological Catalysis and the RNA World?

Published in:

Origins of Life & Evolution of the Biosphere, 2015, v. 45, n. 1/2, p. 15, doi. 10.1007/s11084-015-9403-z

By:

Bernhardt, Harold

Publication type:

Article

Multi-agent approach to sequence structure simulation in the RNA World hypothesis.

Published in:

PLoS ONE, 2020, v. 15, n. 8, p. 1, doi. 10.1371/journal.pone.0238253

By:

Synak, Jaroslaw;
Rybarczyk, Agnieszka;
Blazewicz, Jacek

Publication type:

Article

RNA Synthesis by in Vitro Selected Ribozymes for Recreating an RNA World.

Published in:

Life (2075-1729), 2015, v. 5, n. 1, p. 247, doi. 10.3390/life5010247

By:

Martin, Lyssa L.;
Unrau, Peter J.;
Müller, Ulrich F.

Publication type:

Article

How Amino Acids and Peptides Shaped the RNA World.

Published in:

Life (2075-1729), 2015, v. 5, n. 1, p. 230, doi. 10.3390/life5010230

By:

van der Gulik, Peter T.S.;
Speijer, Dave

Publication type:

Article

An alternative to the RNA world hypothesis.

Published in:

Trends in Evolutionary Biology, 2011, v. 3, p. 2, doi. 10.4081/eb.2011.e2

By:

Francis, Brian R.

Publication type:

Article

Non-coding RNA: a new frontier in regulatory biology.

Published in:

National Science Review, 2014, v. 1, n. 2, p. 190, doi. 10.1093/nsr/nwu008

By:

Xiang-Dong Fu

Publication type:

Article

Autocatalytic Sets and RNA Secondary Structure.

Published in:

Journal of Molecular Evolution, 2017, v. 84, n. 4, p. 153, doi. 10.1007/s00239-017-9787-7

By:

Hordijk, Wim

Publication type:

Article

Purine Biosynthetic Intermediate-Containing Ribose-Phosphate Polymers as Evolutionary Precursors to RNA.

Published in:

Journal of Molecular Evolution, 2014, v. 79, n. 3/4, p. 91, doi. 10.1007/s00239-014-9640-1

By:

Bernhardt, Harold;
Sandwick, Roger

Publication type:

Article

In silico ribozyme evolution in a metabolically coupled RNA population.

Published in:

Biology Direct, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s13062-015-0049-6

By:

Könnyu, Balázs;
Szilágyi, András;
Czárán, Tamás;
Jékely, Gáspár;
Poole, Anthony;
Mulkidjanian, Armen

Publication type:

Article

Reaching Back to Jump Forward: Recent Efforts towards a Systems-Level Hypothesis for an Early RNA World.

Published in:

ChemBioChem, 2015, v. 16, n. 10, p. 1411, doi. 10.1002/cbic.201500233

By:

Springsteen, Greg

Publication type:

Article

In the Beginning was a Mutualism - On the Origin of Translation.

Published in:

Origins of Life & Evolution of the Biosphere, 2018, v. 48, n. 2, p. 223, doi. 10.1007/s11084-018-9557-6

By:

Vitas, Marko;
Dobovišek, Andrej

Publication type:

Article

Template Directed Replication Supports the Maintenance of the Metabolically Coupled Replicator System.

Published in:

Origins of Life & Evolution of the Biosphere, 2015, v. 45, n. 1/2, p. 105, doi. 10.1007/s11084-015-9409-6

By:

Könnyű, Balázs;
Czárán, Tamás

Publication type:

Article

'Hypothesis for the Modern RNA World': A pervasive Non-coding RNA-Based Genetic Regulation is a Prerequisite for the Emergence of Multicellular Complexity.

Published in:

Origins of Life & Evolution of the Biosphere, 2011, v. 41, n. 6, p. 587, doi. 10.1007/s11084-011-9262-1

By:

Lozada-Chávez, Irma;
Stadler, Peter;
Prohaska, Sonja

Publication type:

Article

Some Consequences of the RNA World Hypothesis.

Published in:

Origins of Life & Evolution of the Biosphere, 2003, v. 33, n. 2, p. 211, doi. 10.1023/A:1024616317965

By:

Orgel, Leslie

Publication type:

Article

Correlation of circular RNA abundance with proliferation - exemplified with colorectal and ovarian cancer, idiopathic lung fibrosis, and normal human tissues.

Published in:

Scientific Reports, 2015, p. 8057, doi. 10.1038/srep08057

By:

Bachmayr-Heyda, Anna;
Reiner, Agnes T.;
Auer, Katharina;
Sukhbaatar, Nyamdelger;
Aust, Stefanie;
Bachleitner-Hofmann, Thomas;
Mesteri, Ildiko;
Grunt, Thomas W.;
Zeillinger, Robert;
Pils, Dietmar

Publication type:

Article

Efficient HIV-1 inhibition by a 16 nt-long RNA aptamer designed by combining in vitro selection and in silico optimisation strategies.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep06242

By:

Francisco J. Sánchez-Luque;
Stich, Michael;
Manrubia, Susanna;
Briones, Carlos;
Berzal-Herranz, Alfredo

Publication type:

Article

Long non-coding RNA-Low Expression in Tumor inhibits the invasion and metastasis of esophageal squamous cell carcinoma by regulating p53 expression.

Published in:

Molecular Medicine Reports, 2016, v. 13, n. 4, p. 3074, doi. 10.3892/mmr.2016.4913

By:

PENG-LI WANG;
BIN LIU;
YANG XIA;
CHUN-FENG PAN;
TENG MA;
YI-JIANG CHEN

Publication type:

Article

Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden.

Published in:

Viruses (1999-4915), 2017, v. 9, n. 8, p. 214, doi. 10.3390/v9080214

By:

de Miranda, Joachim R.;
Hedman, Harald;
Onorati, Piero;
Stephan, Jörg;
Karlberg, Olof;
Bylund, Helena;
Terenius, Olle

Publication type:

Article

Fractal polymer globules: A new insight on prebiological evolution.

Published in:

Geochemistry International, 2014, v. 52, n. 13, p. 1252, doi. 10.1134/S0016702914130023

By:

Avetisov, V.;
Nechaev, S.

Publication type:

Article

Long non-coding RNA MALAT1 promotes tumour growth and metastasis in colorectal cancer through binding to SFPQ and releasing oncogene PTBP2 from SFPQ/PTBP2 complex.

Published in:

British Journal of Cancer, 2014, v. 111, n. 4, p. 736, doi. 10.1038/bjc.2014.383

By:

Ji, Q;
Zhang, L;
Liu, X;
Zhou, L;
Wang, W;
Han, Z;
Sui, H;
Tang, Y;
Wang, Y;
Liu, N;
Ren, J;
Hou, F;
Li, Q

Publication type:

Article

RNA expression signatures and posttranscriptional regulation in diabetic nephropathy.

Published in:

Nephrology Dialysis Transplantation, 2015, v. 30, p. iv35, doi. 10.1093/ndt/gfv079

By:

Rudnicki, Michael;
Beckers, Anneleen;
Neuwirt, Hannes;
Vandesompele, Jo

Publication type:

Article

In vitro evaluation of optimized liposomes for delivery of small interfering RNA.

Published in:

Journal of Liposome Research, 2014, v. 24, n. 4, p. 270, doi. 10.3109/08982104.2014.907306

By:

Yang, Tianzhi;
Bantegui, Tracy;
Pike, Kaitlynn;
Bloom, Raymond;
Phipps, Roger;
Bai, Shuhua

Publication type:

Article

Biochemical and structural features of extracellular vesicle-binding RNA aptamers.

Published in:

Biomedical Reports, 2017, v. 6, n. 6, p. 615, doi. 10.3892/br.2017.899

By:

KAZUYOSHI MURAKAMI;
JING ZHAO;
KAZUHIKO YAMASAKI;
MAKOTO MIYAGISHI

Publication type:

Article

Colonic MUC2 mucin regulates the expression and antimicrobial activity of β-defensin 2.

Published in:

Mucosal Immunology (1933-0219), 2015, v. 8, n. 6, p. 1360, doi. 10.1038/mi.2015.27

By:

Cobo, E R;
Kissoon-Singh, V;
Moreau, F;
Chadee, K

Publication type:

Article

tRNA Core Hypothesis for the Transition from the RNA World to the RibonucleoproteinWorld.

Published in:

Life (2075-1729), 2016, v. 6, n. 2, p. 15, doi. 10.3390/life6020015

By:

de Farias, Savio T.;
Rêgo, Thais G.;
José, Marco V.

Publication type:

Article

What RNA World? Why a Peptide/RNA Partnership Merits Renewed Experimental Attention.

Published in:

Life (2075-1729), 2015, v. 5, n. 1, p. 294, doi. 10.3390/life5010294

By:

Carter Jr., Charles W.

Publication type:

Article

Genome Rearrangements Can Make and Break Small RNA Genes.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 2, p. 557, doi. 10.1093/gbe/evv009

By:

Raghavan, Rahul;
Kacharia, Fenil R.;
Millar, Jess A.;
Sislak, Christine D.;
Ochman, Howard

Publication type:

Article

Leishmania braziliensis replication protein A subunit 1: molecular modelling, protein expression and analysis of its affinity for both DNA and RNA.

Published in:

Parasites & Vectors, 2014, v. 7, n. 1, p. 454, doi. 10.1186/s13071-014-0573-8

By:

Nocua, Paola A.;
Ramirez, Cesar A.;
Barreto, George E.;
González, Janneth;
Requena, José M.;
Puerta, Concepción J.

Publication type:

Article

Viral blips during suppressive antiretroviral treatment are associated with high baseline HIV-1 RNA levels.

Published in:

2016

By:

Sörstedt, Erik;
Nilsson, Staffan;
Blaxhult, Anders;
Gisslén, Magnus;
Flamholc, Leo;
Sönnerborg, Anders;
Yilmaz, Aylin

Publication type:

journal article

Evolution of RLSB, a nuclear-encoded S1 domain RNA binding protein associated with post-transcriptional regulation of plastid-encoded rbcL mRNA in vascular plants.

Published in:

BMC Evolutionary Biology, 2016, v. 16, p. 1, doi. 10.1186/s12862-016-0713-1

By:

Yerramsetty, Pradeep;
Stata, Matt;
Siford, Rebecca;
Sage, Tammy L.;
Sage, Rowan F.;
Gane Ka-Shu Wong;
Albert, Victor A.;
Berry, James O.

Publication type:

Article

The RNA World: molecular cooperation at the origins of life.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 1, p. 7, doi. 10.1038/nrg3841

By:

Higgs, Paul G.;
Lehman, Niles

Publication type:

Article

RNA: New CLIP pipeline improves interactome discovery.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 1, p. 2, doi. 10.1038/nrg3877

By:

Koch, Linda

Publication type:

Article

Evolution of the B-Block Binding Subunit of TFIIIC That Binds to the Internal Promoter for RNA Polymerase III.

Published in:

International Journal of Evolutionary Biology, 2014, p. 1, doi. 10.1155/2014/609865

By:

Matsutani, Sachiko

Publication type:

Article

Two featured series of rRNA-derived RNA fragments (rRFs) constitute a novel class of small RNAs.

Published in:

PLoS ONE, 2017, v. 12, n. 4, p. 1, doi. 10.1371/journal.pone.0176458

By:

Chen, Ze;
Sun, Yu;
Yang, Xiaojun;
Wu, Zhenfeng;
Guo, Kaifei;
Niu, Xiaoran;
Wang, Qingsong;
Ruan, Jishou;
Bu, Wenjun;
Gao, Shan

Publication type:

Article

Micro RNA 26a prolongs skin allograft survival and promotes regulatory T cell expansion in mice.

Published in:

Transplant International, 2015, v. 28, n. 10, p. 1143, doi. 10.1111/tri.12590

By:

Xie, Feng;
Chai, Jiake;
Zhang, Zhengwen;
Hu, Quan;
Ma, Tengxiao

Publication type:

Article

meRanTK: methylated RNA analysis ToolKit.

Published in:

Bioinformatics, 2016, v. 32, n. 5, p. 782, doi. 10.1093/bioinformatics/btv647

By:

Rieder, Dietmar;
Amort, Thomas;
Kugler, Elisabeth;
Lusser, Alexandra;
Trajanoski, Zlatko

Publication type:

Article

piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing.

Published in:

Bioinformatics, 2015, v. 31, n. 4, p. 593, doi. 10.1093/bioinformatics/btu647

By:

Han, Bo W.;
Wang, Wei;
Zamore, Phillip D.;
Weng, Zhiping

Publication type:

Article

Improved rat genome gene prediction by integration of ESTs with RNA-Seq information.

Published in:

Bioinformatics, 2015, v. 31, n. 1, p. 25, doi. 10.1093/bioinformatics/btu608

By:

Li, Liping;
Chen, Enguo;
Yang, Chun;
Zhu, Jun;
Jayaraman, Pushkala;
De Pons, Jeffrey;
Kaczorowski, Catherine C.;
Jacob, Howard J.;
Greene, Andrew S.;
Hodges, Matthew R.;
Cowley, Allen W.;
Liang, Mingyu;
Xu, Haiming;
Liu, Pengyuan;
Lu, Yan

Publication type:

Article

Picornaviruses and nuclear functions: targeting a cellular compartment distinct from the replication site of a positive-strand RNA virus.

Published in:

Frontiers in Microbiology, 2015, p. 1, doi. 10.3389/fmicb.2015.00594

By:

Decheng Yang;
Pevear, Daniel C.;
Belov, George A.

Publication type:

Article

Determining multiallelic complex copy number and sequence variation from high coverage exome sequencing data.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2123-y

By:

Forni, Diego;
Martin, Diana;
Abujaber, Razan;
Sharp, Andrew J.;
Sironi, Manuela;
Hollox, Edward J.

Publication type:

Article

A bioinformatic survey of RNA-binding proteins in Plasmodium.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2092-1

By:

Niranjan Reddy, B. P.;
Shrestha, Sony;
Hart, Kevin J.;
Xiaoying Liang;
Kemirembe, Karen;
Liwang Cui;
Lindner, Scott E.

Publication type:

Article

RNA-Seq analysis and transcriptome assembly for blackberry (Rubus sp. Var. Lochness) fruit.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 168, doi. 10.1186/s12864-014-1198-1

By:

Garcia-Seco, Daniel D.;
Zhang, Yang Y.;
Gutierrez-Mañero, Francisco Javier F. J.;
Martin, Cathie C.;
Ramos-Solano, Beatriz B.

Publication type:

Article

High-throughput RNA sequencing reveals the effects of 2,2',4,4' - tetrabromodiphenyl ether on retina and bone development of zebrafish larvae.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 120, doi. 10.1186/s12864-014-1194-5

By:

Ting Xu;
Jing Zhao;
Daqiang Yin;
Qingshun Zhao;
Bingzhi Dong

Publication type:

Article

Inferring bona fide transfrags in RNA-Seq derived-transcriptome assemblies of non-model organisms.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0492-5

By:

Mbandi, Stanley Kimbung;
Hesse, Uljana;
van Heusden, Peter;
Christoffels, Alan

Publication type:

Article

Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0470-y

By:

Comoglio, Federico;
Sievers, Cem;
Paro, Renato

Publication type:

Article

Effective alignment of RNA pseudoknot structures using partition function posterior log-odds scores.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0464-9

By:

Yang Song;
Lei Hua;
Shapiro, Bruce A.;
Wang, Jason T. L.

Publication type:

Article

Identification of important long non-coding RNAs and highly recurrent aberrant alternative splicing events in hepatocellular carcinoma through integrative analysis of multiple RNA-Seq datasets.

Published in:

Molecular Genetics & Genomics, 2016, v. 291, n. 3, p. 1035, doi. 10.1007/s00438-015-1163-y

By:

Zhang, Lu;
Liu, Xiaoqiao;
Zhang, Xuegong;
Chen, Ronghua

Publication type:

Article