Works matching Introns

Results: 5000

Classification of exon and intron regions on DNA sequences with hybrid use of SBERT and ANFIS approaches.

Published in:

Journal of Polytechnic, 2024, v. 27, n. 3, p. 1043, doi. 10.2339/politeknik.1187808

By:

AKALIN, Fatma;
YUMUŞAK, Nejat

Publication type:

Article

Origin and evolution of a new retained intron on the vulcan gene in Drosophila melanogaster subgroup species.

Published in:

Genome, 2014, v. 57, n. 10, p. 567, doi. 10.1139/gen-2014-0132

By:

Zhan, Leilei;
Meng, Qiaohong;
Chen, Ran;
Yue, Yuan;
Jin, Yongfeng;
Bell, J.B.

Publication type:

Article

Is RNA editing implicated in group II intron survival in the angiosperm mitochondrial genome?

Published in:

Genome, 2012, v. 55, n. 1, p. 75, doi. 10.1139/G11-080

By:

Hiroyo Kagami;
Hironori Nagano;
Yoshiya Takahashi;
Tetsuo Mikami;
Tomohiko Kubo

Publication type:

Article

Development and utilization of novel intron length polymorphic markers in foxtail millet ( Setaria italica (L.) P. Beauv.).

Published in:

Genome, 2011, v. 54, n. 7, p. 586, doi. 10.1139/g11-020

By:

Gupta, Sarika;
Kumari, Kajal;
Das, Jyotirmoy;
Lata, Charu;
Puranik, Swati;
Prasad, Manoj;
Donini, Paolo

Publication type:

Article

Sequence diversity analysis of dihydroflavonol 4-reductase intron 1 in common bean.

Published in:

Genome, 2004, v. 47, n. 2, p. 266, doi. 10.1139/G03-103

By:

McClean, Phillip E.;
Lee, Rian K.;
Miklas, Phillip N.

Publication type:

Article

Phylogenetic and Exon-Intron Structure Analysis of Fungal Subtilisins: Support for a Mixed Model of Intron Evolution.

Published in:

Journal of Molecular Evolution, 2005, v. 60, n. 2, p. 238, doi. 10.1007/s00239-004-0147-z

By:

Wang, Chengshu;
Typas, Milton A.;
Butt, Tariq M.

Publication type:

Article

Molecular Genetic Analysis of Cereal β-Amylase Genes Using Exon-Primed Intron-Crossing (EPIC) PCR.

Published in:

Field & Vegetable Crops Research / Ratarstvo i povrtarstvo, 2014, v. 51, n. 3, p. 175, doi. 10.5937/ratpov51-6808

By:

Stratula, Olga;
Cockram, James;
Kalendar, Ruslan

Publication type:

Article

Application of intron 9 and intron 25 dinucleotide repeats of the factor VIII gene for carrier diagnosis in haemophilia A.

Published in:

Haemophilia, 2008, v. 14, n. 3, p. 489, doi. 10.1111/j.1365-2516.2008.01698.x

By:

Venceslá, A.;
Baena, M.;
Fares Taie, L.;
Cornet, M.;
Baiget, M.;
Tizzano, E. F.

Publication type:

Article

Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-07711-1

By:

Back, Georg;
Walther, Dirk

Publication type:

Article

Analysis of Fungal Genomes Reveals Commonalities of Intron Gain or Loss and Functions in Intron-Poor Species.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 10, p. 4166, doi. 10.1093/molbev/msab094

By:

Lim, Chun Shen;
Weinstein, Brooke N;
Roy, Scott W;
Brown, Chris M

Publication type:

Article

Intron exclusion and the mystery of intron loss

Published in:

FEBS Letters, 2006, v. 580, n. 27, p. 6361, doi. 10.1016/j.febslet.2006.10.048

By:

Hu, Kejin

Publication type:

Article

Phylogenetic relationships among native Oxytropis species in Turkey using the trnL intron, trnL-F IGS, and trnV intron cpDNA regions.

Published in:

Turkish Journal of Botany, 2016, v. 40, n. 5, p. 472, doi. 10.3906/bot-1506-45

By:

TEKPINAR, Ayten;
ERKUL, Seher KARAMAN;
AYTAÇ, Zeki;
KAYA, Zeki

Publication type:

Article

An archaeal homing endonuclease I-PogI cleaves at the insertion site of the neighboring intron, which has no nested open reading frame<sup>1</sup><FN ID="FN1"><NO>1</NO>The nucleotide sequences of the two introns, Pog.S1205 and Pog.S1213, have been deposited to the GenBank/EMBL/DDBJ databases under the accession number AB087402.</FN>

Published in:

FEBS Letters, 2003, v. 544, n. 1-3, p. 165, doi. 10.1016/S0014-5793(03)00497-6

By:

Nakayama, Hitoshi;
Morinaga, Yayoi;
Nomura, Norimichi;
Nunoura, Takuro;
Sako, Yoshihiko;
Uchida, Aritsune

Publication type:

Article

The intron landscape of the mtDNA cytb gene among the Ascomycota: introns and intron-encoded open reading frames.

Published in:

Mitochondrial DNA. Part A, 2018, v. 29, n. 7, p. 1015, doi. 10.1080/24701394.2017.1404042

By:

Guha, Tuhin K.;
Wai, Alvan;
Mullineux, Sahra-Taylor;
Hausner, Georg

Publication type:

Article

50/50 Expressional Odds of Retention Signifies the Distinction between Retained Introns and Constitutively Spliced Introns in Arabidopsis thaliana.

Published in:

Frontiers in Plant Science, 2017, p. 1, doi. 10.3389/fpls.2017.01728

By:

Rui Mao;
Chun Liang;
Yang Zhang;
Xingan Hao;
Jinyan Li

Publication type:

Article

Convergent Evolution of Fern-Specific Mitochondrial Group II Intron atp1i361g2 and Its Ancient Source Paralogue rps3i249g2 and Independent Losses of Intron and RNA Editing among Pteridaceae.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 8, p. 2505, doi. 10.1093/gbe/evw173

By:

Zumkeller, Simon Maria;
Knoop, Volker;
Knie, Nils

Publication type:

Article

The Complex Intron Landscape and Massive Intron Invasion in a Picoeukaryote Provides Insights into Intron Evolution.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 12, p. 2393, doi. 10.1093/gbe/evt189

By:

Verhelst, Bram;
Van de Peer, Yves;
Rouzé, Pierre

Publication type:

Article

Evolutionary analysis of Pinus leiophylla: a study using an Intron II sequence fragment of mitochondrial nad1.

Published in:

Canadian Journal of Botany, 2006, v. 84, n. 1, p. 172, doi. 10.1139/B05-138

By:

Vargas Mendoza, Carlos Fabián;
Rodríguez-Banderas, Abril

Publication type:

Article

Tight binding of the 5' exon to domain I of a group II self-splicing intron requires completion of the intron active site.

Published in:

EMBO Journal, 1999, v. 18, n. 4, p. 1025, doi. 10.1093/emboj/18.4.1025

By:

Costa, Maria;
Michel, François

Publication type:

Article

Hypervariable plastid locus variation and intron evolution in the Anacamptis palustris lineage.

Published in:

Genome, 2004, v. 47, n. 6, p. 999, doi. 10.1139/G04-063

By:

Cozzolino, Salvatore;
Cafasso, Donata;
Pellegrino, Giuseppe;
Musacchio, Aldo;
Widmer, Alex;
Donini, P.

Publication type:

Article

Evolutionary Dynamics of the mS952 Intron: A Novel Mitochondrial Group II Intron Encoding a LAGLIDADG Homing Endonuclease Gene.

Published in:

Journal of Molecular Evolution, 2011, v. 72, n. 5/6, p. 433, doi. 10.1007/s00239-011-9442-7

By:

Mullineux, Sahra-Taylor;
Willows, Karla;
Hausner, Georg

Publication type:

Article

Evaluation of Models of the Mechanisms Underlying Intron Loss and Gain in Aspergillus Fungi.

Published in:

Journal of Molecular Evolution, 2010, v. 71, n. 5/6, p. 364, doi. 10.1007/s00239-010-9391-6

By:

Zhang, Lei-Ying;
Yang, Yu-Fei;
Niu, Deng-Ke

Publication type:

Article

An Overview of the Introns-First Theory.

Published in:

Journal of Molecular Evolution, 2009, v. 69, n. 5, p. 527, doi. 10.1007/s00239-009-9279-5

By:

Penny, David;
Hoeppner, Marc P.;
Poole, Anthony M.;
Jeffares, Daniel C.

Publication type:

Article

Evolution of Pleopsidium (Lichenized Ascomycota) S943 Group I Introns and the Phylogeography of an Intron-Encoded Putative Homing Endonuclease.

Published in:

Journal of Molecular Evolution, 2007, v. 64, n. 3, p. 285, doi. 10.1007/s00239-005-0179-z

By:

Reeb, Valérie;
Haugen, Peik;
Bhattacharya, Debashish;
Lutzoni, François

Publication type:

Article

Vertical Evolution and Intragenic Spread of Lichen-Fungal Group I Introns.

Published in:

Journal of Molecular Evolution, 2002, v. 55, n. 1, p. 74, doi. 10.1007/s00239-001-2305-x

By:

Bhattacharya, Debashish;
Friedl, Thomas;
Helms, Gert

Publication type:

Article

Group I Introns from Zygomycota: Evolutionary Implications for the Fungal IC1 Intron Subgroup.

Published in:

Journal of Molecular Evolution, 2002, v. 54, n. 5, p. 692, doi. 10.1007/s00239-001-0071-4

By:

Tanabe, Yuuhiko;
Yokota, Akira;
Sugiyama, Junta

Publication type:

Article

Dynamic Insertion–Deletion of Introns in Deuterostome EF-1α Genes.

Published in:

Journal of Molecular Evolution, 2002, v. 54, n. 1, p. 118, doi. 10.1007/s00239-001-0024-y

By:

Wada, Hiroshi;
Kobayashi, Mari;
Sato, Riki;
Satoh, Nori;
Miyasaka, Hitoshi;
Shirayama, Yoshihisa

Publication type:

Article

Intron Dynamics and the Evolution of Integrin β-Subunit Genes: Maintenance of an Ancestral Gene Structure in the Coral, Acropora millepora.

Published in:

Journal of Molecular Evolution, 2001, v. 53, n. 6, p. 703, doi. 10.1007/s002390010257

By:

Schmitt, Dasan M.;
Brower, Danny L.

Publication type:

Article

Regular Spliceosomal Introns Are Invasive in Chlamydomonas reinhardtii: 15 Introns in the Recently Relocated Mitochondrial cox2 and cox3 Genes.

Published in:

Journal of Molecular Evolution, 2001, v. 53, n. 4/5, p. 333, doi. 10.1007/s002390010223

By:

Watanabe, Kazuo I.;
Ohama, Takeshi

Publication type:

Article

Group II Intron-Encoded Proteins (IEPs/Maturases) as Key Regulators of Nad1 Expression and Complex I Biogenesis in Land Plant Mitochondria.

Published in:

Genes, 2022, v. 13, n. 7, p. 1137, doi. 10.3390/genes13071137

By:

Mizrahi, Ron;
Shevtsov-Tal, Sofia;
Ostersetzer-Biran, Oren

Publication type:

Article

Structural Organization of S516 Group I Introns in Myxomycetes.

Published in:

Genes, 2022, v. 13, n. 6, p. 944, doi. 10.3390/genes13060944

By:

Furulund, Betty M. N.;
Karlsen, Bård O.;
Babiak, Igor;
Haugen, Peik;
Johansen, Steinar D.

Publication type:

Article

At the origin of spliceosomal introns.

Published in:

2013

By:

Collemare, Jerome;
van der Burgt, Ate;
de Wit, Pierre J.G.M.

Publication type:

Art Reproduction

Zrsr2 Is Essential for the Embryonic Development and Splicing of Minor Introns in RNA and Protein Processing Genes in Zebrafish.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 18, p. N.PAG, doi. 10.3390/ijms231810668

By:

Weinstein, Rachel;
Bishop, Kevin;
Broadbridge, Elizabeth;
Yu, Kai;
Carrington, Blake;
Elkahloun, Abdel;
Zhen, Tao;
Pei, Wuhong;
Burgess, Shawn M.;
Liu, Paul;
Bresciani, Erica;
Sood, Raman

Publication type:

Article

Transcriptome-Wide Detection of Intron/Exon Definition in the Endogenous Pre-mRNA Transcripts of Mammalian Cells and Its Regulation by Depolarization.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 17, p. 10157, doi. 10.3390/ijms231710157

By:

Liu, Ling;
Das, Urmi;
Ogunsola, Samuel;
Xie, Jiuyong

Publication type:

Article

Minor Intron Splicing from Basic Science to Disease.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 11, p. 6062, doi. 10.3390/ijms22116062

By:

El Marabti, Ettaib;
Malek, Joel;
Younis, Ihab

Publication type:

Article

Identification and Validation of Evolutionarily Conserved Unusually Short Pre-mRNA Introns in the Human Genome.

Published in:

International Journal of Molecular Sciences, 2015, v. 16, n. 5, p. 10376, doi. 10.3390/ijms160510376

By:

Shimada, Makoto K.;
Noriko Sasaki-Haraguchi;
Akila Mayeda

Publication type:

Article

CHARACTERIZATION OF THE SPLICE SITES IN GT–AG AND GC–AG INTRONS IN HIGHER EUKARYOTES USING FULL-LENGTH cDNAs.

Published in:

Journal of Bioinformatics & Computational Biology, 2004, v. 2, n. 2, p. 309, doi. 10.1142/S0219720004000570

By:

Kitamura-Abe, Sumie;
Itoh, Hitomi;
Washio, Takanori;
Tsutsumi, Akihiro;
Tomita, Masaru

Publication type:

Article

Synthetic introns help identify sequences in the 5′ UTR intron of the Glycine max polyubiquitin (Gmubi) promoter that give increased promoter activity.

Published in:

Planta: An International Journal of Plant Biology, 2017, v. 245, n. 4, p. 849, doi. 10.1007/s00425-016-2646-8

By:

Grant, Trudi;
De La Torre, Carola;
Zhang, Ning;
Finer, John

Publication type:

Article

Spliceosomal Introns: Features, Functions, and Evolution.

Published in:

Biochemistry (00062979), 2020, v. 85, n. 7, p. 725, doi. 10.1134/S0006297920070019

By:

Poverennaya, I. V.;
Roytberg, M. A.

Publication type:

Article

The evolution of hemocyanin genes in Tectipleura: a multitude of conserved introns in highly diverse gastropods.

Published in:

BMC Ecology & Evolution, 2021, v. 21, p. 1, doi. 10.1186/s12862-021-01763-3

By:

Schäfer, Gabriela Giannina;
Pedrini-Martha, Veronika;
Jackson, Daniel John;
Dallinger, Reinhard;
Lieb, Bernhard

Publication type:

Article

Eu- Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A.

Published in:

Phycological Research, 2008, v. 56, n. 1, p. 21, doi. 10.1111/j.1440-1835.2008.00481.x

By:

Hoshina, Ryo;
Imamura, Nobutaka

Publication type:

Article

GC-AG Introns Features in Long Non-coding and Protein-Coding Genes Suggest Their Role in Gene Expression Regulation.

Published in:

Frontiers in Genetics, 2020, v. 11, p. 1, doi. 10.3389/fgene.2020.00488

By:

Abou Alezz, Monah;
Celli, Ludovica;
Belotti, Giulia;
Lisa, Antonella;
Bione, Silvia

Publication type:

Article

Use of aminoglycoside 3' adenyltransferase as a selection marker for Chlamydia trachomatis intron-mutagenesis and in vivo intron stability.

Published in:

BMC Research Notes, 2015, p. 1, doi. 10.1186/s13104-015-1542-9

By:

Lowden, Nicole M.;
Yeruva, Laxmi;
Johnson, Cayla M.;
Bowlin, Anne K.;
Fisher, Derek J.

Publication type:

Article

Exon-intron structure and sequence variation of the calreticulin gene among Rhipicephalus sanguineus group ticks.

Published in:

Parasites & Vectors, 2016, v. 9, p. 1, doi. 10.1186/s13071-016-1909-3

By:

Porretta, Daniele;
Latrofa, Maria Stefania;
Dantas-Torres, Filipe;
Mastrantonio, Valentina;
Iatta, Roberta;
Otranto, Domenico;
Urbanelli, Sandra

Publication type:

Article

Intron losses and gains in the nematodes.

Published in:

Biology Direct, 2022, v. 17, n. 1, p. 1, doi. 10.1186/s13062-022-00328-8

By:

Ma, Ming-Yue;
Xia, Ji;
Shu, Kun-Xian;
Niu, Deng-Ke

Publication type:

Article

In silico analysis of the sequence features responsible for alternatively spliced introns in the model green alga Chlamydomonas reinhardtii.

Published in:

Plant Molecular Biology, 2017, v. 94, n. 3, p. 253, doi. 10.1007/s11103-017-0605-9

By:

Raj-Kumar, Praveen-Kumar;
Vallon, Olivier;
Liang, Chun

Publication type:

Article

Mutation reports: Intron 1 and 22 inversions in Indian haemophilics.

Published in:

Annals of Hematology, 2003, v. 82, n. 9, p. 546, doi. 10.1007/s00277-003-0704-3

By:

Ahmed, Rafeeq;
Kannan, M.;
Choudhry, Ved Prakash;
Saxena, Renu

Publication type:

Article

DMD transcripts in CRL-2061 rhabdomyosarcoma cells show high levels of intron retention by intron-specific PCR amplification.

Published in:

Cancer Cell International, 2017, v. 17, p. 1, doi. 10.1186/s12935-017-0428-4

By:

Emma Tabe Eko Niba;
Ryo Yamanaka;
Rani, Abdul Qawee Mahyoob;
Hiroyuki Awano;
Masaaki Matsumoto;
Hisahide Nishio;
Masafumi Matsuo

Publication type:

Article

Bacterial group II introns generate genetic diversity by circularization and trans-splicing from a population of intron-invaded mRNAs.

Published in:

PLoS Genetics, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pgen.1007792

By:

LaRoche-Johnston, Félix;
Monat, Caroline;
Coulombe, Samy;
Cousineau, Benoit

Publication type:

Article

银耳栽培菌株的线粒体内含子多态性分析.

Published in:

Acta Edulis Fungi, 2022, v. 29, n. 1, p. 1, doi. 10.16488/j.cnki.1005-9873.2022.01.001

By:

林隆基;
黄海辰;
钟馨林;
李岳峰;
钟长科;
谢宝贵;
明瑞光;
邓优锦

Publication type:

Article