Works matching Repeated sequence (Genetics)

Results: 589

De Novo assembly and characterization of Aria alnifolia Chloroplast and mitochondrial genomes reveal homologous conformational changes mediated by repeat regions and gene transfer.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11892-4

By:

Ha, Young-Ho;
Cho, Ara;
Kim, Tae-Hee;
Gil, Hee-Young

Publication type:

Article

Non-coding repeat analyses in patients with Parkinson's disease.

Published in:

Frontiers in Neurology, 2025, p. 1, doi. 10.3389/fneur.2025.1606305

By:

Hirano, Makito;
Samukawa, Makoto;
Miyatake, Satoko;
Yamagishi, Yuko;
Isono, Chiharu;
Yoshikawa, Rino;
Saigoh, Kazumasa;
Terayama, Atsushi;
Higashimoto, Yuji;
Koshimizu, Eriko;
Mizuguchi, Takeshi;
Fujii, Kanako;
Mitsui, Yoshiyuki;
Matsumoto, Naomichi;
Nagai, Yoshitaka

Publication type:

Article

Comparative chloroplast genomics of wild-type Panicum miliaceum cv. ATL1 and its M<sub>4</sub> mutant line: insights for molecular breeding applications.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06999-5

By:

Kumar, Ayushi;
Rajasekaran, Ravikesavan;
Krishnamoorthy, Iyanar;
Alagarswamy, Senthil;
Chandrakumar, K.;
Pulapet, Sowmya;
Markkandan, Kesavan;
Kanagarajan, Selvaraju;
Narayanan, Manikanda Boopathi

Publication type:

Article

Cytogenomic analysis in Seriemas (Cariamidae): Insights into an atypical avian karyotype.

Published in:

Journal of Heredity, 2025, v. 116, n. 4, p. 441, doi. 10.1093/jhered/esaf012

By:

Souza, Guilherme Mota;
Vidal, Jhon Alex Dziechciarz;
Utsunomia, Ricardo;
Deon, Geize Aparecida;
Oliveira, Edivaldo Herculano Correa de;
Franca, Raqueli Teresinha;
Porto-Foresti, Fabio;
Liehr, Thomas;
Souza, Fernando Henrique Santos de;
Kretschmer, Rafael;
Cioffi, Marcelo de Bello

Publication type:

Article

Case Report: A rare chromosomal imbalance with dup 7q36.3-qter and del 7pter-p22.3 arising from parental pericentric inversion.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1564711

By:

Lin, Rongbo;
Zhang, Wenhui;
Huang, Mingwei;
Shen, Yansheng;
Liao, Jianxiang;
Song, Ping;
Qi, Ying;
He, Jie;
Xia, Yuanxiang;
Duan, Jing;
Ye, Yuanzhen;
Yi, Qiuwei;
Lan, Pei;
Kong, Lingyu;
Hu, Zhanqi

Publication type:

Article

A chromosome-level genome assembly of Guimi No. 2 (Actinidia chinensis).

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05593-6

By:

Zhou, Jia;
Wang, Feifei;
Zhong, Weiming;
Zheng, Qianming;
Qi, Yong;
Shi, Binbin;
Liu, Qing;
Zhang, Sheng;
Wang, Nan;
Tang, Dongmei

Publication type:

Article

Shorter EGFR Dinucleotide Repeat Length Predicts Better Response of Patients with Advanced Non-small Cell Lung Cancer to EGFR Tyrosine Kinase Inhibitor.

Published in:

Cell Biochemistry & Biophysics, 2015, v. 73, n. 3, p. 799, doi. 10.1007/s12013-014-0289-6

By:

Chen, Bin;
Luo, Jie;
Gu, Weiqing;
Shen, Li;
Wang, Heyong;
Zhou, Songwen

Publication type:

Article

Tetrasomic inheritance pattern of the pentaploid Solanum chacoense (+) S. tuberosum somatic hybrid (resistant to bacterial wilt) revealed by SSR detected alleles.

Published in:

Plant Cell, Tissue & Organ Culture, 2016, v. 127, n. 2, p. 315, doi. 10.1007/s11240-016-1051-0

By:

Chen, Lin;
Guo, Xianpu;
Wang, Haibo;
Xie, Conghua;
Cai, Xingkui;
He, Li;
Zhou, Jun;
Liu, Jun

Publication type:

Article

Direct somatic embryogenesis and encapsulation of somatic embryos for in vitro conservation of Bacopa monnieri (L.) Wettst.

Published in:

Plant Cell, Tissue & Organ Culture, 2016, v. 127, n. 2, p. 433, doi. 10.1007/s11240-016-1067-5

By:

Khilwani, Barkha;
Kaur, Amanpreet;
Ranjan, Ritika;
Kumar, Anil

Publication type:

Article

Protoplast isolation and genetically true-to-type plant regeneration from leaf- and callus-derived protoplasts of Albizia julibrissin.

Published in:

Plant Cell, Tissue & Organ Culture, 2016, v. 127, n. 2, p. 475, doi. 10.1007/s11240-016-1072-8

By:

Rahmani, Mohammad-Shafie;
Pijut, Paula;
Shabanian, Naghi

Publication type:

Article

Analysis of additive and epistatic quantitative trait loci underlying fatty acid concentrations in soybean seeds across multiple environments.

Published in:

Euphytica, 2015, v. 206, n. 3, p. 689, doi. 10.1007/s10681-015-1491-3

By:

Fan, Shengxu;
Li, Bin;
Yu, Fukuan;
Han, Fenxia;
Yan, Shurong;
Wang, Lianzheng;
Sun, Junming

Publication type:

Article

Localization of the powdery mildew resistance gene Pm07J126 in wheat ( Triticum aestivum L.).

Published in:

Euphytica, 2015, v. 205, n. 3, p. 691, doi. 10.1007/s10681-015-1388-1

By:

Yu, Shuiyang;
Long, Hai;
Deng, Guangbing;
Pan, Zhifen;
Liang, Junjun;
Yu, Maoqun

Publication type:

Article

A novel gene responsible for erect panicle from Oryza glumaepatula.

Published in:

Euphytica, 2015, v. 205, n. 3, p. 739, doi. 10.1007/s10681-015-1390-7

By:

Zhang, Yu;
Zhou, Jiawu;
Yang, Ying;
Li, Jing;
Xu, Peng;
Deng, Xianneng;
Deng, Wei;
Wu, Zhijuan;
Tao, Dayun

Publication type:

Article

Rapid generation and analysis of expressed sequence tags to uncovering inflorescence secondary metabolism of Bougainvillea spectabilis 'Speciosas' by pyrosequencing.

Published in:

Euphytica, 2015, v. 205, n. 3, p. 747, doi. 10.1007/s10681-015-1400-9

By:

Xu, S.;
Huang, Q.;
Lin, C.;
Lin, F.;
Lin, L.;
Shen, Q.

Publication type:

Article

Identification and validation of a major QTL controlling the presence/absence of leaf lobes in Brassica rapa L.

Published in:

Euphytica, 2015, v. 205, n. 3, p. 761, doi. 10.1007/s10681-015-1403-6

By:

Wang, Yugang;
Liu, Xuejun;
Ji, Xiaohong;
Zhang, Lei;
Liu, Yating;
Lv, Xixi;
Feng, Hui

Publication type:

Article

Association of SSR markers and morpho-physiological traits associated with salinity tolerance in sugar beet ( Beta vulgaris L.).

Published in:

Euphytica, 2015, v. 205, n. 3, p. 785, doi. 10.1007/s10681-015-1408-1

By:

Abbasi, Zahra;
Majidi, Mohammad;
Arzani, Ahmad;
Rajabi, Abazar;
Mashayekhi, Parisa;
Bocianowski, Jan

Publication type:

Article

Genetic and physical mapping of a new allele of Pik locus from japonica rice 'Liziangxintuanheigu'.

Published in:

Euphytica, 2015, v. 205, n. 3, p. 889, doi. 10.1007/s10681-015-1437-9

By:

Singh, W.;
Kapila, R.;
Sharma, T.;
Rathour, R.

Publication type:

Article

Transferability of rice SSR markers to Miscanthus sinensis, a potential biofuel crop.

Published in:

Euphytica, 2013, v. 191, n. 3, p. 455, doi. 10.1007/s10681-013-0915-1

By:

Yu, Jiangyan;
Zhao, Hua;
Zhu, Tingting;
Chen, Liang;
Peng, Junhua

Publication type:

Article

Frameshift Mutations in Repeat Sequences of ANK3, HACD4, TCP10L, TP53BP1, MFN1, LCMT2, RNMT, TRMT6, METTL8 and METTL16 Genes in Colon Cancers.

Published in:

Pathology & Oncology Research, 2018, v. 24, n. 3, p. 617, doi. 10.1007/s12253-017-0287-2

By:

Yeon, Su Yeon;
Jo, Yun Sol;
Choi, Eun Ji;
Kim, Min Sung;
Yoo, Nam Jin;
Lee, Sug Hyung

Publication type:

Article

Potentials and limits of pairwise kinship analysis using autosomal short tandem repeat loci.

Published in:

International Journal of Legal Medicine, 2010, v. 124, n. 3, p. 205, doi. 10.1007/s00414-009-0413-0

By:

Nothnagel, Michael;
Schmidtke, Jörg;
Krawczak, Michael

Publication type:

Article

Development and Characterization of Novel EST-SSRs from Larix gmelinii and Their Cross-Species Transferability.

Published in:

Molecules, 2015, v. 20, n. 7, p. 12469, doi. 10.3390/molecules200712469

By:

Guojun Zhang;
Zhenzhen Sun;
Di Zhou;
Min Xiong;
Xian Wang;
Junming Yang;
Zunzheng Wei

Publication type:

Article

Visualization and probability-based scoring of structural variants within repetitive sequences.

Published in:

Bioinformatics, 2014, v. 30, n. 11, p. 1514, doi. 10.1093/bioinformatics/btu054

By:

Halper-Stromberg, Eitan;
Steranka, Jared;
Burns, Kathleen H.;
Sabunciyan, Sarven;
Irizarry, Rafael A.

Publication type:

Article

RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures.

Published in:

Bioinformatics, 2012, v. 28, n. 24, p. 3257, doi. 10.1093/bioinformatics/bts550

By:

Walsh, Ian;
Sirocco, Francesco G.;
Minervini, Giovanni;
Di Domenico, Tomás;
Ferrari, Carlo;
Tosatto, Silvio C. E.

Publication type:

Article

Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads.

Published in:

Bioinformatics, 2012, v. 28, n. 21, p. 2732, doi. 10.1093/bioinformatics/bts482

By:

Chong, Zechen;
Ruan, Jue;
Wu, Chung-I.

Publication type:

Article

Pharmacogenomics: will the promise be fulfilled?

Published in:

2011

By:

Altman, Russ B.;
Kroemer, Heyo K.;
McCarty, Catherine A.;
Ratain, Mark J.;
Roden, Dan

Publication type:

research

Genetic variation: Y variants tip the chromatin balance.

Published in:

2010

By:

Swami, Meera

Publication type:

journal article

Formation of a Family of Long Intergenic Noncoding RNA Genes with an Embedded Translocation Breakpoint Motif in Human Chromosomal Low Copy Repeats of 22q11.2--Some Surprises and Questions.

Published in:

Non-Coding RNA, 2018, v. 4, n. 3, p. 1, doi. 10.3390/ncrna4030016

By:

Delihas, Nicholas

Publication type:

Article

IGF1 CA-Repeat Polymorphism and Prostate Cancer Development in Isfahan Province of Iran.

Published in:

Journal of Kerman University of Medical Sciences, 2018, v. 25, n. 3, p. 191

By:

Bazafkan, Hoda;
Javadirad, Seyed-Morteza;
Tavasoli, Manoochehr;
Hemati, Simin

Publication type:

Article

Identification and development of microsatellite markers in Hamamelis mollis (Hamamelidaceae).

Published in:

Applications in Plant Sciences, 2018, v. 6, n. 10, p. N.PAG, doi. 10.1002/aps3.1189

By:

Yin, Qianyi;
Huang, Cuiying;
Huang, Yanshuang;
Chen, Sufang;
Ye, Huagu;
Fan, Qiang;
Liao, Wenbo

Publication type:

Article

Development and characterization of EST‐SSR markers for Carex angustisquama (Cyperaceae), an extremophyte in solfatara fields.

Published in:

Applications in Plant Sciences, 2018, v. 6, n. 10, p. N.PAG, doi. 10.1002/aps3.1185

By:

Nagasawa, Koki;
Setoguchi, Hiroaki;
Maki, Masayuki;
Goto, Hayato;
Fukushima, Keitaro;
Isagi, Yuji;
Sakaguchi, Shota

Publication type:

Article

Development and characterization of simple sequence repeat markers for the invasive tetraploid waterweed <italic>Elodea nuttallii</italic> (Hydrocharitaceae).

Published in:

Applications in Plant Sciences, 2018, v. 6, n. 4, p. 1, doi. 10.1002/aps3.1146

By:

Weickardt, Isabell;
Zehnsdorf, Andreas;
Durka, Walter

Publication type:

Article

Genotype and virulence of Streptococcus iniae isolated from diseased olive flounder Paralichthys olivaceus in Korea.

Published in:

Fisheries Science, 2014, v. 80, n. 6, p. 1277, doi. 10.1007/s12562-014-0804-0

By:

Kim, Myoung;
Jin, Ji;
Han, Hyun;
Choi, Hye;
Hong, Suhee;
Cho, Ji

Publication type:

Article

Wild stock structure of Girella punctata in Japan revealed shallow genetic differentiation but subtle substructure in subsidiary distributions.

Published in:

Fisheries Science, 2009, v. 75, n. 4, p. 909, doi. 10.1007/s12562-009-0118-9

By:

Umino, Tetsuya;
Kajihara, Teruyuki;
Shiozaki, Hiroshi;
Ohkawa, Toshiyuki;
Jeong, Dal-Sang;
Ohara, Kenichi

Publication type:

Article

Illumina Synthetic Long Read Sequencing Allows Recovery of Missing Sequences even in the 'Finished' C. elegans Genome.

Published in:

Scientific Reports, 2015, p. 10814, doi. 10.1038/srep10814

By:

Li, Runsheng;
Hsieh, Chia-Ling;
Young, Amanda;
Zhang, Zhihong;
Ren, Xiaoliang;
Zhao, Zhongying

Publication type:

Article

Mate availability contributes to maintain the mixed-mating system in a scolytid beetle.

Published in:

Journal of Evolutionary Biology, 2009, v. 22, n. 7, p. 1526, doi. 10.1111/j.1420-9101.2009.01763.x

By:

GOTTLIEB, D.;
HOLZMAN, J. P.;
LUBIN, Y.;
BOUSKILA, A.;
KELLEY, S. T.;
HARARI, A. R.

Publication type:

Article

Development of 34 polynucleotide repeat microsatellites for Chinese lake gudgeon ( Sarcocheilichthys sinensis Bleeker, 1871) by transcriptome sequencing.

Published in:

Journal of Applied Ichthyology, 2017, v. 33, n. 3, p. 566, doi. 10.1111/jai.13275

By:

Zhu, C.;
Pan, Z.;
Wang, H.;
Wu, N.;
Chang, G.;
Ding, H.

Publication type:

Article

Determining the Source of Equine Bloodstains by Dinucleotide Repeats Determining the Source of Equine Bloodstains by Dinucleotide Repeats CHEN ET AL. MATCHING A SUSPECT RACEHORSE TO BLOODSTAIN EVIDENCE.

Published in:

Journal of Forensic Sciences, 2010, v. 55, n. 6, p. 1610, doi. 10.1111/j.1556-4029.2010.01466.x

By:

Chen, Jin‐Wen;
Uboh, Cornelius E.;
Soma, Lawrence R.;
Li, Xiaoqing;
Guan, Fuyu;
You, Youwen;
Liu, Ying

Publication type:

Article

Development of genomic tools in a widespread tropical tree, Symphonia globulifera L.f.: a new low-coverage draft genome, SNP and SSR markers.

Published in:

Molecular Ecology Resources, 2017, v. 17, n. 4, p. 614, doi. 10.1111/1755-0998.12605

By:

Olsson, Sanna;
Seoane‐Zonjic, Pedro;
Bautista, Rocío;
Claros, M. Gonzalo;
González‐Martínez, Santiago C.;
Scotti, Ivan;
Scotti‐Saintagne, Caroline;
Hardy, Olivier J.;
Heuertz, Myriam

Publication type:

Article

Tritryps Comparative Repeatome: Insights on Repetitive Element Evolution in Trypanosomatid Pathogens.

Published in:

Genome Biology & Evolution, 2019, v. 11, n. 2, p. 546, doi. 10.1093/gbe/evz017

By:

Pita, Sebastián;
Díaz-Viraqué, Florencia;
Iraola, Gregorio;
Robello, Carlos

Publication type:

Article

Discovery and Evolution of New Domains in Yeast Heterochromatin Factor Sir4 and Its Partner Esc1.

Published in:

Genome Biology & Evolution, 2019, v. 11, n. 2, p. 572, doi. 10.1093/gbe/evz010

By:

Faure, Guilhem;
Jézéquel, Kévin;
Roisné-Hamelin, Florian;
Bitard-Feildel, Tristan;
Lamiable, Alexis;
Marcand, Stéphane;
Callebaut, Isabelle

Publication type:

Article

De Novo Assembly and Annotation of the Asian Tiger Mosquito (Aedesalbopictus) Repeatome with dnaPipeTE from Raw Genomic Reads and Comparative Analysis with the Yellow Fever Mosquito (Aedes aegypti).

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 4, p. 1192, doi. 10.1093/gbe/evv050

By:

Goubert, Clément;
Modolo, Laurent;
Vieira, Cristina;
ValienteMoro, Claire;
Mavingui, Patrick;
Boulesteix, Matthieu

Publication type:

Article

Reconstructing the Evolutionary History of Transposable Elements.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 1, p. 77, doi. 10.1093/gbe/evs130

By:

Le Rouzic, Arnaud;
Payen, Thibaut;
Hua-Van, Aurélie

Publication type:

Article

Identification of QTLs for Rice Starch RVA Profile Properties in Different Ecological Sites

Published in:

Acta Agronomica Sinica / Zuowu Xuebao, 2012, v. 38, n. 2, p. 264, doi. 10.1016/S1875-2780(11)60105-3

By:

YANG, Ya-Chun;
NI, Da-Hu;
SONG, Feng-Shun;
LI, Li;
LU, Xu-Zhong;
LI, Ze-Fu;
YANG, Jian-Bo

Publication type:

Article

Genetic Analysis and Mapping of a Novel Short Root Hair Gene OsSRH3 in Rice

Published in:

Acta Agronomica Sinica / Zuowu Xuebao, 2012, v. 38, n. 2, p. 240, doi. 10.1016/S1875-2780(11)60103-X

By:

DING, Wo-Na;
HUANG, Wei;
NING, Yong-Qiang;
ZHU, Shi-Hua

Publication type:

Article

Marker Genotypes for Parents of Japonica Hybrid Rice with High Combining Ability of Yield Traits

Published in:

Acta Agronomica Sinica / Zuowu Xuebao, 2010, v. 36, n. 8, p. 1270, doi. 10.1016/S1875-2780(09)60064-X

By:

LIANG, Kui;
HUANG, Dian-Cheng;
ZHAO, Kai-Ming;
NGUYEN, Phuong-Tung;
XIE, Hui;
MA, Wen-Xia;
HONG, De-Lin

Publication type:

Article

Mapping QTLs for Grain Weight and Shape Using Four Sister Near Isogenic Lines of Rice

Published in:

Acta Agronomica Sinica / Zuowu Xuebao, 2010, v. 36, n. 8, p. 1310, doi. 10.1016/S1875-2780(09)60068-7

By:

YAO, Guo-Xin;
LI, Jin-Jie;
ZHANG, Qiang;
HU, Guang-Long;
CHEN, Chao;
TANG, Bo;
ZHANG, Hong-Liang;
LI, Zi-Chao

Publication type:

Article

Genetic differentiation within the inbred C57BL/6J mouse strain.

Published in:

Journal of Zoology, 2009, v. 278, n. 1, p. 42, doi. 10.1111/j.1469-7998.2008.00546.x

By:

Niu, Y.;
Liang, S.

Publication type:

Article

Comparative karyotype analysis among six species of Ipomoea based on two newly identified repetitive sequences.

Published in:

Genome, 2019, v. 62, n. 4, p. 243, doi. 10.1139/gen-2018-0169

By:

Sun, Jianying;
Yu, Lixuan;
Cai, Zeixi;
Zhang, An;
Jin, Weiwei;
Han, Yonghua;
Li, Zongyun;
Schwarzacher, T.

Publication type:

Article

Molecular marker development and genetic diversity exploration by RNA-seq in Platycodon grandiflorum.

Published in:

Genome, 2015, v. 58, n. 10, p. 441, doi. 10.1139/gen-2015-0017

By:

Kim, Hyun Jung;
Jung, Jungsu;
Kim, Myung-Shin;
Lee, Je Min;
Choi, Doil;
Yeam, Inhwa;
Lukens, L.

Publication type:

Article

Isolation and characterization of novel Ty1- copia-like retrotransposons from lily<sup>1</sup>.

Published in:

Genome, 2013, v. 56, n. 9, p. 495, doi. 10.1139/gen-2013-0088

By:

Lee, Sung-Il;
Park, Kyong-Cheul;
Son, Jae-Han;
Hwang, Youn-Jung;
Lim, Ki-Byung;
Song, Ye-Su;
Kim, Jong-Hwa;
Kim, Nam-Soo;
Belzile, F.

Publication type:

Article