Works matching IS 08873585 AND DT 2023 AND VI 91 AND IP 2

Results: 14

MHC2AffyPred: A machine‐learning approach to estimate affinity of MHC class II peptides based on structural interaction fingerprints.

Published in:

Proteins, 2023, v. 91, n. 2, p. 277, doi. 10.1002/prot.26428

By:

Jani, Siddhi P.;
Kumar, Sivakumar Prasanth;
Mangukia, Naman;
Patel, Saumya K.;
Pandya, Himanshu A.;
Rawal, Rakesh M.

Publication type:

Article

Understanding the helical stability of charged peptides.

Published in:

Proteins, 2023, v. 91, n. 2, p. 268, doi. 10.1002/prot.26427

By:

Singh, Nitin Kumar;
Agarwal, Manish;
Radhakrishna, Mithun

Publication type:

Article

Cyclic cystine knot and its strong implication on the structure and dynamics of cyclotides.

Published in:

Proteins, 2023, v. 91, n. 2, p. 256, doi. 10.1002/prot.26426

By:

Venkatesan, Jayapriya;
Roy, Durba

Publication type:

Article

Vaccine target and carrier molecule nontypeable Haemophilus influenzae protein D dimerizes like the close Escherichia coliGlpQ homolog but unlike other known homolog dimers.

Published in:

Proteins, 2023, v. 91, n. 2, p. 161, doi. 10.1002/prot.26418

By:

Jones, Seth P.;
Cook, Kali H.;
Holmquist, Melody L.;
Almekinder, Liam J.;
Delaney, Annie M.;
Charles, Ryhl;
Labbe, Natalie;
Perdue, Janai;
Jackson, Niaya;
Pichichero, Michael E.;
Kaur, Ravinder;
Michel, Lea V.;
Gleghorn, Michael L.

Publication type:

Article

Comparison of allosteric signaling in DnaK and BiP using mutual information between simulated residue conformations.

Published in:

Proteins, 2023, v. 91, n. 2, p. 237, doi. 10.1002/prot.26425

By:

Schneider, Markus;
Antes, Iris

Publication type:

Article

Milestoning simulation of ligand dissociation from the glycogen synthase kinase 3β.

Published in:

Proteins, 2023, v. 91, n. 2, p. 209, doi. 10.1002/prot.26423

By:

Rathnayake, Samith;
Narayan, Brajesh;
Elber, Ron;
Wong, Chung F.

Publication type:

Article

De novo design and Rosetta‐based assessment of high‐affinity antibody variable regions (Fv) against the SARS‐CoV‐2 spike receptor binding domain (RBD).

Published in:

Proteins, 2023, v. 91, n. 2, p. 196, doi. 10.1002/prot.26422

By:

Boorla, Veda Sheersh;
Chowdhury, Ratul;
Ramasubramanian, Ranjani;
Ameglio, Brandon;
Frick, Rahel;
Gray, Jeffrey J.;
Maranas, Costas D.

Publication type:

Article

A new approach for extracting information from protein dynamics.

Published in:

Proteins, 2023, v. 91, n. 2, p. 183, doi. 10.1002/prot.26421

By:

Liu, Jenny;
Amaral, Luís A. N.;
Keten, Sinan

Publication type:

Article

Issue Information ‐ Table of Content.

Published in:: Proteins, 2023, v. 91, n. 2, p. 135, doi. 10.1002/prot.26359
Publication type:: Article

Thermostabilizing mechanisms of canonical single amino acid substitutions at a GH1 β‐glucosidase probed by multiple MD and computational approaches.

Published in:

Proteins, 2023, v. 91, n. 2, p. 218, doi. 10.1002/prot.26424

By:

Rocha, Rafael Eduardo Oliveira;
Mariano, Diego César Batista;
Almeida, Tiago Silva;
CorrêaCosta, Leon Sulfierry;
Fischer, Pedro Henrique Camargo;
Santos, Lucianna Helene;
Caffarena, Ernesto Raul;
da Silveira, Carlos Henrique;
Lamp, Leonida M.;
Fernandez‐Quintero, Monica Lisa;
Liedl, Klaus Roman;
de Melo‐Minardi, Raquel Cardoso;
de Lima, Leonardo Henrique França

Publication type:

Article

N‐glycosylation induced changes in tau protein dynamics reveal its role in tau misfolding and aggregation: A microsecond long molecular dynamics study.

Published in:

Proteins, 2023, v. 91, n. 2, p. 147, doi. 10.1002/prot.26417

By:

Mathew, Alen T.;
Baidya, Anurag T. K.;
Das, Bhanuranjan;
Devi, Bharti;
Kumar, Rajnish

Publication type:

Article

Issue Information ‐ Forthcoming.

Published in:: Proteins, 2023, v. 91, n. 2, p. 290, doi. 10.1002/prot.26360
Publication type:: Article

Mapping of antibody epitopes based on docking and homology modeling.

Published in:

Proteins, 2023, v. 91, n. 2, p. 171, doi. 10.1002/prot.26420

By:

Desta, Israel T.;
Kotelnikov, Sergei;
Jones, George;
Ghani, Usman;
Abyzov, Mikhail;
Kholodov, Yaroslav;
Standley, Daron M.;
Sabitova, Maria;
Beglov, Dmitri;
Vajda, Sandor;
Kozakov, Dima

Publication type:

Article

Structural insights into thermostable direct hemolysin of Vibrio parahaemolyticus using single‐particle cryo‐EM.

Published in:

Proteins, 2023, v. 91, n. 2, p. 137, doi. 10.1002/prot.26416

By:

Mishra, Suman;
Kundu, Nidhi;
Pramanick, Ishika;
Kumar, Anil;
Chattopadhyay, Kausik;
Dutta, Somnath

Publication type:

Article