Works matching IS 08873585 AND DT 2013 AND VI 81 AND IP 9

Results: 18

Identification of efflux proteins using efficient radial basis function networks with position-specific scoring matrices and biochemical properties.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1634, doi. 10.1002/prot.24322

By:

Ou, Yu‐Yen;
Chen, Shu‐An;
Chang, Yun‐Min;
Velmurugan, Devadasan;
Fukui, Kazuhiko;
Michael Gromiha, M.

Publication type:

Article

Crystal structure of the protein from Arabidopsis thaliana gene At5g06450, a putative DnaQ-like exonuclease domain-containing protein with homohexameric assembly.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1669, doi. 10.1002/prot.24315

By:

Smith, David W.;
Han, Mi Ra;
Park, Joon Sung;
Kim, Kyung Rok;
Yeom, Taeho;
Lee, Ji Yeon;
Kim, Do Jin;
Bingman, Craig A.;
Kim, Hyun‐Jung;
Jo, Kyubong;
Han, Byung Woo;
Phillips, George N.

Publication type:

Article

Characterization of PDZ domain-peptide interaction interface based on energetic patterns.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1676, doi. 10.1002/prot.24292

By:

Li, Nan;
Hou, Tingjun;
Ding, Bo;
Wang, Wei

Publication type:

Article

Ab initio folding of extended α-helix: A theoretical study about the role of electrostatic polarization in the folding of helical structures.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1610, doi. 10.1002/prot.24319

By:

Lazim, Raudah;
Wei, Caiyi;
Sun, Tiedong;
Zhang, Dawei

Publication type:

Article

Crystal structure of the cataract-causing P23T γD-crystallin mutant.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1493, doi. 10.1002/prot.24321

By:

Ji, Fangling;
Koharudin, Leonardus M. I.;
Jung, Jinwon;
Gronenborn, Angela M.

Publication type:

Article

Ranking multiple docking solutions based on the conservation of inter-residue contacts.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1571, doi. 10.1002/prot.24314

By:

Oliva, Romina;
Vangone, Anna;
Cavallo, Luigi

Publication type:

Article

Capturing protein sequence-structure specificity using computational sequence design.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1556, doi. 10.1002/prot.24307

By:

Mach, Paul;
Koehl, Patrice

Publication type:

Article

Molecular function prediction for a family exhibiting evolutionary tendencies toward substrate specificity swapping: Recurrence of tyrosine aminotransferase activity in the Iα subfamily.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1593, doi. 10.1002/prot.24318

By:

Muratore, Kathryn E.;
Engelhardt, Barbara E.;
Srouji, John R.;
Jordan, Michael I.;
Brenner, Steven E.;
Kirsch, Jack F.

Publication type:

Article

Structure-based engineering of streptavidin monomer with a reduced biotin dissociation rate.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1621, doi. 10.1002/prot.24320

By:

DeMonte, Daniel;
Drake, Eric J.;
Lim, Kok Hong;
Gulick, Andrew M.;
Park, Sheldon

Publication type:

Article

The stability of cylindrin β-barrel amyloid oligomer models-A molecular dynamics study.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1542, doi. 10.1002/prot.24302

By:

Berhanu, Workalemahu M.;
Hansmann, Ulrich H. E.

Publication type:

Article

Substrate versus inhibitor dynamics of P-glycoprotein.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1653, doi. 10.1002/prot.24324

By:

Ma, Jerome;
Biggin, Philip C.

Publication type:

Article

Combined computational design of a zinc-binding site and a protein-protein interaction: One open zinc coordination site was not a robust hotspot for de novo ubiquitin binding.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1678, doi. 10.1002/prot.24379

By:

Der, Bryan S.;
Jha, Raamesh K.;
Lewis, Steven M.;
Thompson, Peter M.;
Guntas, Gurkan;
Kuhlman, Brian

Publication type:

Article

Contributions of water transfer energy to protein-ligand association and dissociation barriers: Watermap analysis of a series of p38α MAP kinase inhibitors.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1509, doi. 10.1002/prot.24276

By:

Pearlstein, Robert A.;
Sherman, Woody;
Abel, Robert

Publication type:

Article

Right- and left-handed three-helix proteins. I. Experimental and simulation analysis of differences in folding and structure.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1527, doi. 10.1002/prot.24301

By:

Glyakina, Anna V.;
Pereyaslavets, Leonid B.;
Galzitskaya, Oxana V.

Publication type:

Article

Alternative zinc-binding sites explain the redox sensitivity of zinc-containing anti-sigma factors.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1644, doi. 10.1002/prot.24323

By:

Heo, Lim;
Cho, Yoo‐Bok;
Lee, Myeong Sup;
Roe, Jung‐Hye;
Seok, Chaok

Publication type:

Article

A universal combinatorial design of antibody framework to graft distinct CDR sequences: A bioinformatics approach.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1677, doi. 10.1002/prot.24378

By:

Haidar, Jaafar N.;
Yuan, Qing‐An;
Zeng, Lin;
Snavely, Mark;
Luna, Xenia;
Zhang, Haifan;
Zhu, Wei;
Ludwig, Dale L.;
Zhu, Zhenping

Publication type:

Article

New molecular interaction of IIA<sup>Ntr</sup> and HPr from Burkholderia pseudomallei identified by X-ray crystallography and docking studies.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1499, doi. 10.1002/prot.24275

By:

Kim, Mi‐Sun;
Lee, Hasup;
Heo, Lim;
Lim, Areum;
Seok, Chaok;
Shin, Dong Hae

Publication type:

Article

Crystal structure of deltarhodopsin-3 from Haloterrigena thermotolerans.

Published in:

Proteins, 2013, v. 81, n. 9, p. 1585, doi. 10.1002/prot.24316

By:

Zhang, Jin;
Mizuno, Katsuhide;
Murata, Yuki;
Koide, Hideaki;
Murakami, Midori;
Ihara, Kunio;
Kouyama, Tsutomu

Publication type:

Article