Works matching IS 08873585 AND DT 2011 AND VI 79 AND IP 2

Results: 28

Structural and functional analysis of substrate recognition by the 250s loop in amylomaltase from Thermus brockianus.

Published in:

Proteins, 2011, v. 79, n. 2, p. 633, doi. 10.1002/prot.22911

By:

Jung, Jong-Hyun;
Jung, Tae-Yang;
Seo, Dong-Ho;
Yoon, Sei-Mee;
Choi, Hyun-Chang;
Park, Byoung Chul;
Park, Cheon-Seok;
Woo, Eui-Jeon

Publication type:

Article

Computational methods for identifying a layered allosteric regulatory mechanism for ALS-causing mutations of Cu-Zn superoxide dismutase 1.

Published in:

Proteins, 2011, v. 79, n. 2, p. 417, doi. 10.1002/prot.22892

By:

Schuyler, Adam D.;
Carlson, Heather A.;
Feldman, Eva L.

Publication type:

Article

Compact conformations of α-synuclein induced by alcohols and copper.

Published in:

Proteins, 2011, v. 79, n. 2, p. 611, doi. 10.1002/prot.22909

By:

Natalello, Antonino;
Benetti, Federico;
Doglia, Silvia Maria;
Legname, Giuseppe;
Grandori, Rita

Publication type:

Article

Studies on the inference of protein binding regions across fold space based on structural similarities.

Published in:

Proteins, 2011, v. 79, n. 2, p. 499, doi. 10.1002/prot.22897

By:

Teyra, Joan;
Hawkins, John;
Zhu, Hongbo;
Pisabarro, M. Teresa

Publication type:

Article

A new regulatory switch in a JAK protein kinase.

Published in:

Proteins, 2011, v. 79, n. 2, p. 393, doi. 10.1002/prot.22889

By:

Tsui, Vickie;
Gibbons, Paul;
Ultsch, Mark;
Mortara, Kyle;
Chang, Christine;
Blair, Wade;
Pulk, Rebecca;
Stanley, Mark;
Starovasnik, Melissa;
Williams, David;
Lamers, Maria;
Leonard, Phillip;
Magnuson, Steven;
Liang, Jun;
Eigenbrot, Charles

Publication type:

Article

Insights into Mycoplasma genitalium metabolism revealed by the structure of MG289, an extracytoplasmic thiamine binding lipoprotein.

Published in:

Proteins, 2011, v. 79, n. 2, p. 528, doi. 10.1002/prot.22900

By:

Sippel, Katherine H.;
Venkatakrishnan, Balasubramanian;
Boehlein, Susan K.;
Sankaran, Banumathi;
Quirit, Jeanne G.;
Govindasamy, Lakshamanan;
Agbandje-McKenna, Mavis;
Goodison, Steve;
Rosser, Charles J.;
McKenna, Robert

Publication type:

Article

Distinct interfacial biclique patterns between ssDNA-binding proteins and those with dsDNAs.

Published in:

Proteins, 2011, v. 79, n. 2, p. 598, doi. 10.1002/prot.22908

By:

Zeng, Tao;
Li, Jinyan;
Liu, Juan

Publication type:

Article

Development of a new physics-based internal coordinate mechanics force field and its application to protein loop modeling.

Published in:

Proteins, 2011, v. 79, n. 2, p. 477, doi. 10.1002/prot.22896

By:

Arnautova, Yelena A.;
Abagyan, Ruben A.;
Totrov, Maxim

Publication type:

Article

Behavior of the ATP grasp domain of biotin carboxylase monomers and dimers studied using molecular dynamics simulations.

Published in:

Proteins, 2011, v. 79, n. 2, p. 622, doi. 10.1002/prot.22910

By:

Novak, Brian R.;
Moldovan, Dorel;
Waldrop, Grover L.;
de Queiroz, Marcio S.

Publication type:

Article

Re-engineering specificity in 1,3-1, 4-β-glucanase to accept branched xyloglucan substrates.

Published in:

Proteins, 2011, v. 79, n. 2, p. 365, doi. 10.1002/prot.22884

By:

Addington, Trevor;
Calisto, Barbara;
Alfonso-Prieto, Mercedes;
Rovira, Carme;
Fita, Ignasi;
Planas, Antoni

Publication type:

Article

A differential association of Apolipoprotein E isoforms with the amyloid-β oligomer in solution.

Published in:

Proteins, 2011, v. 79, n. 2, p. 402, doi. 10.1002/prot.22891

By:

Petrlova, Jitka;
Hong, Hyun-Seok;
Bricarello, Daniel A.;
Harishchandra, Ghimire;
Lorigan, Gary A.;
Jin, Lee-Way;
Voss, John C.

Publication type:

Article

Structure and DNA-binding activity of the Pyrococcus furiosus SMC protein hinge domain.

Published in:

Proteins, 2011, v. 79, n. 2, p. 558, doi. 10.1002/prot.22903

By:

Griese, Julia J.;
Hopfner, Karl-Peter

Publication type:

Article

Distinct second extracellular loop structures of the brain cannabinoid CB<sub>1</sub> receptor: Implication in ligand binding and receptor function.

Published in:

Proteins, 2011, v. 79, n. 2, p. 581, doi. 10.1002/prot.22907

By:

Shim, Joong-Youn;
Rudd, James;
Ding, Tomas T.

Publication type:

Article

Design principles for chlorophyll-binding sites in helical proteins.

Published in:

Proteins, 2011, v. 79, n. 2, p. 463, doi. 10.1002/prot.22895

By:

Braun, Paula;
Goldberg, Eran;
Negron, Christopher;
von Jan, Mathias;
Xu, Fei;
Nanda, Vikas;
Koder, Ronald L.;
Noy, Dror

Publication type:

Article

Crystal structure of curcuminoid synthase CUS from Oryza sativa.

Published in:

Proteins, 2011, v. 79, n. 2, p. 669, doi. 10.1002/prot.22888

By:

Miyazono, Ken-ichi;
Um, Jounghyun;
Imai, Fabiana Lica;
Katsuyama, Yohei;
Ohnishi, Yasuo;
Horinouchi, Sueharu;
Tanokura, Masaru

Publication type:

Article

Conformational flexibility and binding interactions of the G protein βγ heterodimer.

Published in:

Proteins, 2011, v. 79, n. 2, p. 518, doi. 10.1002/prot.22899

By:

Park, Min-Sun;
Smrcka, Alan V.;
Stern, Harry A.

Publication type:

Article

Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1.

Published in:

Proteins, 2011, v. 79, n. 2, p. 547, doi. 10.1002/prot.22902

By:

Santos, Camila R.;
Tonoli, Celisa C. C.;
Trindade, Daniel M.;
Betzel, Christian;
Takata, Hiroki;
Kuriki, Takashi;
Kanai, Tamotsu;
Imanaka, Tadayuki;
Arni, Raghuvir K.;
Murakami, Mário T.

Publication type:

Article

Accounting for conformational entropy in predicting binding free energies of protein-protein interactions.

Published in:

Proteins, 2011, v. 79, n. 2, p. 444, doi. 10.1002/prot.22894

By:

Kamisetty, Hetunandan;
Ramanathan, Arvind;
Bailey-Kellogg, Chris;
Langmead, Christopher James

Publication type:

Article

In-cell protein NMR and protein leakage.

Published in:

Proteins, 2011, v. 79, n. 2, p. 347, doi. 10.1002/prot.22906

By:

Barnes, Christopher O.;
Pielak, Gary J.

Publication type:

Article

Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae reveals a novel active site architecture and the basis of substrate specificity.

Published in:

Proteins, 2011, v. 79, n. 2, p. 662, doi. 10.1002/prot.22865

By:

Ma, Jinming;
Lu, Qianda;
Yuan, Ye;
Ge, Honghua;
Li, Kuai;
Zhao, Wei;
Gao, Yongxiang;
Niu, Liwen;
Teng, Maikun

Publication type:

Article

Intrinsic disorder of Drosophila melanogaster hormone receptor 38 N-terminal domain.

Published in:

Proteins, 2011, v. 79, n. 2, p. 376, doi. 10.1002/prot.22887

By:

Dziedzic-Letka, Agnieszka;
Rymarczyk, Grzegorz;
Kapłon, Tomasz M.;
Górecki, Andrzej;
Szamborska-Gbur, Agnieszka;
Wojtas, Magdalena;
Dobryszycki, Piotr;
Ożyhar, Andrzej

Publication type:

Article

Structure of the Mycobacterium tuberculosis OmpATb protein: A model of an oligomeric channel in the mycobacterial cell wall.

Published in:

Proteins, 2011, v. 79, n. 2, p. 645, doi. 10.1002/prot.22912

By:

Yang, Yinshan;
Auguin, Daniel;
Delbecq, Stéphane;
Dumas, Emilie;
Molle, Gérard;
Molle, Virginie;
Roumestand, Christian;
Saint, Nathalie

Publication type:

Article

An accurate feature-based method for identifying DNA-binding residues on protein surfaces.

Published in:

Proteins, 2011, v. 79, n. 2, p. 509, doi. 10.1002/prot.22898

By:

Xiong, Yi;
Liu, Juan;
Wei, Dong-Qing

Publication type:

Article

A mechanism by which binding of the broadly neutralizing antibody b12 unfolds the inner domain α1 helix in an engineered HIV-1 gp120.

Published in:

Proteins, 2011, v. 79, n. 2, p. 537, doi. 10.1002/prot.22901

By:

Emileh, Ali;
Abrams, Cameron F.

Publication type:

Article

Temperature-dependent oligomerization in M-crystallin: Lead or lag toward cataract, an NMR perspective.

Published in:

Proteins, 2011, v. 79, n. 2, p. 569, doi. 10.1002/prot.22905

By:

Barnwal, Ravi P.;
Devi, K. Manjula;
Agarwal, Geetika;
Sharma, Yogendra;
Chary, Kandala V. R.

Publication type:

Article

One-bond and two-bond j couplings help annotate protein secondary-structure motifs: J-coupling indexing applied to human endoplasmic reticulum protein ERp18.

Published in:

Proteins, 2011, v. 79, n. 2, p. 428, doi. 10.1002/prot.22893

By:

Schmidt, Jürgen M.;
Zhou, Shen;
Rowe, Michelle L.;
Howard, Mark J.;
Williamson, Richard A.;
Löhr, Frank

Publication type:

Article

Crystal structure of the dimeric Oct6 (POU3f1) POU domain bound to palindromic MORE DNA.

Published in:

Proteins, 2011, v. 79, n. 2, p. 674, doi. 10.1002/prot.22916

By:

Jauch, Ralf;
Choo, Siew Hua;
Ng, Calista Keow Leng;
Kolatkar, Prasanna R.

Publication type:

Article

Hydrolysis of organophosphate compounds by mutant butyrylcholinesterase: A story of two histidines.

Published in:

Proteins, 2011, v. 79, n. 2, p. 352, doi. 10.1002/prot.22864

By:

Amitay, Moshe;
Shurki, Avital

Publication type:

Article