Works matching IS 08873585 AND DT 2004 AND VI 54 AND IP 4

Results: 25

The state of the Protein Structure Initiative.

Published in:

Proteins, 2004, v. 54, n. 4, p. 611, doi. 10.1002/prot.20000

By:

Eaton Lattman

Publication type:

Article

Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 Å resolution.

Published in:

Proteins, 2004, v. 54, n. 4, p. 810

By:

Robert Schwarzenbacher;
Frank von Delft;
Polat Abdubek;
Eileen Ambing;
Tanja Biorac;
Linda S. Brinen;
Jaume M. Canaves;
Jamison Cambell;
Hsui-Ju Chiu;
Xiaoping Dai;
Ashley M. Deacon;
Mike DiDonato;
Marc-Andre Elsliger;
Said Eshagi;
Ross Floyd;
Adam Godzik;
Carina Grittini;
Slawomir K. Grzechnik;
Eric Hampton;
Lukasz Jaroszewski

Publication type:

Article

Crystal structure of human p120 homologue protein PH1374 from Pyrococcus horikoshii.

Published in:

Proteins, 2004, v. 54, n. 4, p. 814, doi. 10.1002/prot.10645

By:

Idumi Ishikawa;
Naoki Sakai;
Tomohiro Tamura;
Min Yao;
Nobuhisa Watanabe;
Isao Tanaka

Publication type:

Article

Reorganization in apo- and holo-β-lactoglobulin upon protonation of Glu89: Molecular dynamics and pK<sub>a</sub> calculations.

Published in:

Proteins, 2004, v. 54, n. 4, p. 744, doi. 10.1002/prot.10643

By:

Ivano Eberini;
António M. Baptista;
Elisabetta Gianazza;
Franca Fraternali;
Tiziana Beringhelli

Publication type:

Article

Extreme free energy of stabilization of Taq DNA polymerase.

Published in:

Proteins, 2004, v. 54, n. 4, p. 616, doi. 10.1002/prot.10641

By:

Allyn J. Schoeffler;
Allison M. Joubert;
Fenggang Peng;
Farheen Khan;
Chin-Chi Liu;
Vince J. LiCata

Publication type:

Article

Conserved spatially interacting motifs of protein superfamilies: Application to fold recognition and function annotation of genome data.

Published in:

Proteins, 2004, v. 54, n. 4, p. 657, doi. 10.1002/prot.10638

By:

Anirban Bhaduri;
R. Ravishankar;
R. Sowdhamini

Publication type:

Article

Rapid proteinligand docking using soft modes from molecular dynamics simulations to account for protein deformability: Binding of FK506 to FKBP.

Published in:

Proteins, 2004, v. 54, n. 4, p. 759, doi. 10.1002/prot.10637

By:

Martin Zacharias

Publication type:

Article

Solution structure of the ubiquitin-binding domain in Swa2p from Saccharomyces cerevisiae.

Published in:

Proteins, 2004, v. 54, n. 4, p. 784, doi. 10.1002/prot.10636

By:

Nicholas Chim;
Walter E. Gall;
Jing Xiao;
Mark P. Harris;
Todd R. Graham;
Andrzej M. Krezel

Publication type:

Article

A novel method for protein secondary structure prediction using dual-layer SVM and profiles.

Published in:

Proteins, 2004, v. 54, n. 4, p. 738, doi. 10.1002/prot.10634

By:

Jian Guo;
Hu Chen;
Zhirong Sun;
Yuanlie Lin

Publication type:

Article

What is the protein design alphabet?

Published in:

Proteins, 2004, v. 54, n. 4, p. 622, doi. 10.1002/prot.10633

By:

Nikolay V. Dokholyan

Publication type:

Article

Crystal structure of an HEPN domain protein (TM0613) from Thermotoga maritima at 1.75 Å resolution.

Published in:

Proteins, 2004, v. 54, n. 4, p. 806, doi. 10.1002/prot.10631

By:

Heidi Erlandsen

Publication type:

Article

Recovering the true targets of specific ligands by virtual screening of the protein data bank.

Published in:

Proteins, 2004, v. 54, n. 4, p. 671, doi. 10.1002/prot.10625

By:

Nicodéme Paul;
Esther Kellenberger;
Guillaume Bret;
Pascal Müller;
Didier Rognan

Publication type:

Article

Protein simple sequence conservation.

Published in:

Proteins, 2004, v. 54, n. 4, p. 629, doi. 10.1002/prot.10623

By:

Kim Lan Sim;
Trevor P. Creamer

Publication type:

Article

Structural analysis of disease-causing mutations in the P-subfamily of forkhead transcription factors.

Published in:

Proteins, 2004, v. 54, n. 4, p. 639, doi. 10.1002/prot.10621

By:

Sharmila Banerjee-Basu;
Andreas D. Baxevanis

Publication type:

Article

Crystal structure of Homo sapiens protein hp14.5.

Published in:

Proteins, 2004, v. 54, n. 4, p. 797, doi. 10.1002/prot.10619

By:

Babu A. Manjasetty;
Heinrich Delbrück;
Dinh-Trung Pham;
Uwe Mueller;
Martin Fieber-Erdmann;
Christoph Scheich;
Volker Sievert;
Konrad Büssow;
Frank H. Neisen;
Wilhelm Weihofen;
Bernhard Loll;
Wolfram Saenger

Publication type:

Article

Novel approaches for modeling of the A<sub>1</sub> adenosine receptor and its agonist binding site.

Published in:

Proteins, 2004, v. 54, n. 4, p. 705

By:

Hugo Gutiérrez-de-Terán;
Nuria B. Centeno;
Manuel Pastor;
Ferran Sanz

Publication type:

Article

Crystal structure of a putative glutamine amido transferase (TM1158) from Thermotoga maritima at 1.7 Å resolution.

Published in:

Proteins, 2004, v. 54, n. 4, p. 801

By:

Robert Schwarzenbacher;
Ashley M. Deacon;
Lukasz Jaroszewski;
Linda S. Brinen;
Jaume M. Canaves;
Xiaoping Dai;
Marc-André Elsliger;
Ross Floyd;
Adam Godzik;
Carina Grittini;
Slawomir K. Grzechnik;
Heath E. Klock;
Eric Koese

Publication type:

Article

Missense mutations in transmembrane domains of proteins: Phenotypic propensity of polar residues for human disease.

Published in:

Proteins, 2004, v. 54, n. 4, p. 648, doi. 10.1002/prot.10611

By:

Anthony W. Partridge;
Alex G. Therien;
Charles M. Deber

Publication type:

Article

Characterization of the amino acid contribution to the folding degree of proteins.

Published in:

Proteins, 2004, v. 54, n. 4, p. 727, doi. 10.1002/prot.10609

By:

Ernesto Estrada

Publication type:

Article

Crystal structure of the YGR205w protein from Saccharomyces cerevisiae: Close structural resemblance to E. coli pantothenate kinase.

Published in:

Proteins, 2004, v. 54, n. 4, p. 776, doi. 10.1002/prot.10596

By:

Ines Li de La Sierra-Gallay;
Bruno Collinet;
Marc Graille;
Sophie Quevillon-Cheruel;
Dominique Liger;
Philippe Minard;
Karine Blondeau;
Gilles Henckes;
Robert Aufrère;
Nicolas Leulliot;
Cong-Zhao Zhou;
Isabelle Sorel;
Jean-Luc Ferrer;
Anne Poupon;
Joël Janin;
Herman van Tilbeurgh

Publication type:

Article

A structural and dynamic model for the interaction of interleukin-8 and glycosaminoglycans: Support from isothermal fluorescence titrations.

Published in:

Proteins, 2004, v. 54, n. 4, p. 768, doi. 10.1002/prot.10590

By:

Elmar Krieger;
Elena Geretti;
Barbara Brandner;
Birgit Goger;
Timothy N. Wells;
Andreas J. Kungl

Publication type:

Article

The role of carbon-donor hydrogen bonds in stabilizing tryptophan conformations.

Published in:

Proteins, 2004, v. 54, n. 4, p. 716, doi. 10.1002/prot.10577

By:

Robert J. Petrella

Publication type:

Article

Probing the α-complementing domain of E. coli β-galactosidase with use of an insertional pentapeptide mutagenesis strategy based on Mu in vitro DNA transposition.

Published in:

Proteins, 2004, v. 54, n. 4, p. 681, doi. 10.1002/prot.10467

By:

Eini Poussu;
Mauno Vihinen;
Lars Paulin;
Harri Savilahti

Publication type:

Article

NMR structure of the hypothetical protein AQ-1857 encoded by the Y157 gene from Aquifex aeolicus reveals a novel protein fold.

Published in:

Proteins, 2004, v. 54, n. 4, p. 794, doi. 10.1002/prot.10424

By:

Duanxiang Xu;
Gaohua Liu;
Rong Xiao;
Tom Acton;
Sharon Goldsmith-Fischman;
Barry Honig;
Gaetano T. Montelione;
Thomas Szyperski

Publication type:

Article

Molecular modeling study of the editing active site of Escherichia coli leucyl-tRNA synthetase: Two amino acid binding sites in the editing domain.

Published in:

Proteins, 2004, v. 54, n. 4, p. 693, doi. 10.1002/prot.10300

By:

Keun Woo Lee;
James M. Briggs

Publication type:

Article