Works matching IS 08873585 AND DT 2001 AND VI 45 AND IP S5

Results: 23

Processing and evaluation of predictions in CASP4.

Published in:

Proteins, 2001, v. 45, n. S5, p. 13, doi. 10.1002/prot.10052

By:

Zemla, Adam;
Venclovas, Česlovas;
Moult, John;
Fidelis, Krzysztof

Publication type:

Article

Protein structure prediction using a combination of sequence-based alignment, constrained energy minimization, and structural alignment.

Published in:

Proteins, 2001, v. 45, n. S5, p. 133, doi. 10.1002/prot.10005

By:

Standley, Daron M.;
Eyrich, Volker A.;
An, Yuling;
Pincus, David L.;
Gunn, John R.;
Friesner, Richard A.

Publication type:

Article

Assessment of novel fold targets in CASP4: Predictions of three-dimensional structures, secondary structures, and interresidue contacts.

Published in:

Proteins, 2001, v. 45, n. S5, p. 98, doi. 10.1002/prot.10056

By:

Lesk, Arthur M.;
Lo Conte, Loredana;
Hubbard, Tim J.P.

Publication type:

Article

Predicting novel protein folds by using FRAGFOLD.

Published in:

Proteins, 2001, v. 45, n. S5, p. 127, doi. 10.1002/prot.1171

By:

Jones, David T.

Publication type:

Article

Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM.

Published in:

Proteins, 2001, v. 45, n. S5, p. 39, doi. 10.1002/prot.1168

By:

Bates, Paul A.;
Kelley, Lawrence A.;
MacCallum, Robert M.;
Sternberg, Michael J.E.

Publication type:

Article

Fold recognition from sequence comparisons.

Published in:

Proteins, 2001, v. 45, n. S5, p. 68, doi. 10.1002/prot.10000

By:

Koretke, Kristin K.;
Russell, Robert B.;
Lupas, Andrei N.

Publication type:

Article

EVA: Large-scale analysis of secondary structure prediction.

Published in:

Proteins, 2001, v. 45, n. S5, p. 192, doi. 10.1002/prot.10051

By:

Rost, Burkhard;
Eyrich, Volker A.

Publication type:

Article

Application of PROSPECT in CASP4: Characterizing protein structures with new folds.

Published in:

Proteins, 2001, v. 45, n. S5, p. 140, doi. 10.1002/prot.10022

By:

Xu, Dong;
Crawford, Oakley H.;
LoCascio, Philip F.;
Xu, Ying

Publication type:

Article

Analysis and assessment of comparative modeling predictions in CASP4.

Published in:

Proteins, 2001, v. 45, n. S5, p. 22, doi. 10.1002/prot.10015

By:

Tramontano, Anna;
Leplae, Raphael;
Morea, Veronica

Publication type:

Article

Prediction targets of CASP4.

Published in:

Proteins, 2001, v. 45, n. S5, p. 8, doi. 10.1002/prot.10055

By:

Murzin, Alexey;
Hubbard, Tim J.P.

Publication type:

Article

CASP2 knowledge-based approach to distant homology recognition and fold prediction in CASP4.

Published in:

Proteins, 2001, v. 45, n. S5, p. 76, doi. 10.1002/prot.10037

By:

Murzin, Alexey G.;
Bateman, Alex

Publication type:

Article

Comparative modeling of CASP4 target proteins: Combining results of sequence search with three-dimensional structure assessment.

Published in:

Proteins, 2001, v. 45, n. S5, p. 47, doi. 10.1002/prot.10008

By:

Venclovas, Česlovas

Publication type:

Article

Rosetta in CASP4: Progress in ab initio protein structure prediction.

Published in:

Proteins, 2001, v. 45, n. S5, p. 119, doi. 10.1002/prot.1170

By:

Bonneau, Richard;
Tsai, Jerry;
Ruczinski, Ingo;
Chivian, Dylan;
Rohl, Carol;
Strauss, Charlie E. M.;
Baker, David

Publication type:

Article

What is the value added by human intervention in protein structure prediction?

Published in:

Proteins, 2001, v. 45, n. S5, p. 86, doi. 10.1002/prot.10021

By:

Karplus, Kevin;
Karchin, Rachel;
Barrett, Christian;
Tu, Spencer;
Cline, Melissa;
Diekhans, Mark;
Grate, Leslie;
Casper, Jonathan;
Hughey, Richard

Publication type:

Article

CASP4 editorial.

Published in:

Proteins, 2001, v. 45, n. S5, p. 1, doi. 10.1002/prot.10061

By:

Lattman, Eaton E.

Publication type:

Article

Critical assessment of methods of protein structure prediction (CASP): Round IV.

Published in:

Proteins, 2001, v. 45, n. S5, p. 2, doi. 10.1002/prot.10054

By:

Moult, John;
Fidelis, Krzysztof;
Zemla, Adam;
Hubbard, Tim

Publication type:

Article

CAFASP2: The second critical assessment of fully automated structure prediction methods.

Published in:

Proteins, 2001, v. 45, n. S5, p. 171, doi. 10.1002/prot.10036

By:

Fischer, Daniel;
Elofsson, Arne;
Rychlewski, Leszek;
Pazos, Florencio;
Valencia, Alfonso;
Rost, Burkhard;
Ortiz, Angel R.;
Dunbrack, Roland L.

Publication type:

Article

Progress in predicting inter-residue contacts of proteins with neural networks and correlated mutations.

Published in:

Proteins, 2001, v. 45, n. S5, p. 157, doi. 10.1002/prot.1173

By:

Fariselli, Piero;
Olmea, Osvaldo;
Valencia, Alfonso;
Casadio, Rita

Publication type:

Article

Comparison of performance in successive CASP experiments.

Published in:

Proteins, 2001, v. 45, n. S5, p. 163, doi. 10.1002/prot.10053

By:

Venclovas, Česlovas;
Zemla, Adam;
Fidelis, Krzysztof;
Moult, John

Publication type:

Article

LiveBench-2: Large-scale automated evaluation of protein structure prediction servers.

Published in:

Proteins, 2001, v. 45, n. S5, p. 184, doi. 10.1002/prot.10039

By:

Bujnicki, Janusz M.;
Elofsson, Arne;
Fischer, Daniel;
Rychlewski, Leszek

Publication type:

Article

Ab initio protein structure prediction via a combination of threading, lattice folding, clustering, and structure refinement.

Published in:

Proteins, 2001, v. 45, n. S5, p. 149, doi. 10.1002/prot.1172

By:

Skolnick, Jeffrey;
Kolinski, Andrzej;
Kihara, Daisuke;
Betancourt, Marcos;
Rotkiewicz, Piotr;
Boniecki, Michal

Publication type:

Article

Sequence-structure homology recognition by iterative alignment refinement and comparative modeling.

Published in:

Proteins, 2001, v. 45, n. S5, p. 92, doi. 10.1002/prot.1169

By:

Williams, M.G.;
Shirai, H.;
Shi, J.;
Nagendra, H.G.;
Mueller, J.;
Mizuguchi, K.;
Miguel, R.N.;
S.C. Lovell;
Innis, C.A.;
Deane, C.M.;
Chen, L.;
Campillo, N.;
Burke, D.F.;
Blundell, T.L.;
de Bakker, P.I.W.

Publication type:

Article

Assessment of the CASP4 fold recognition category.

Published in:

Proteins, 2001, v. 45, n. S5, p. 55, doi. 10.1002/prot.10006

By:

Sippl, Manfred J.;
Lackner, Peter;
Domingues, Francisco S.;
Prlić, Andreas;
Malik, Rainer;
Andreeva, Antonina;
Wiederstein, Markus

Publication type:

Article