Works matching AU Bocklitz, Thomas

Results: 77

Non-resonant background removal in broadband CARS microscopy using deep-learning algorithms.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-74912-5

By:

Vernuccio, Federico;
Broggio, Elia;
Sorrentino, Salvatore;
Bresci, Arianna;
Junjuri, Rajendhar;
Ventura, Marco;
Vanna, Renzo;
Bocklitz, Thomas;
Bregonzio, Matteo;
Cerullo, Giulio;
Rigneault, Hervé;
Polli, Dario

Publication type:

Article

MMIR: an open-source software for the registration of multimodal histological images.

Published in:

BMC Medical Informatics & Decision Making, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12911-024-02424-3

By:

Díaz Guerrero, Rodrigo Escobar;
Luis Oliveira, José;
Popp, Juergen;
Bocklitz, Thomas

Publication type:

Article

Raman-Spectroscopy Based Cell Identification on a Microhole Array Chip.

Published in:

Micromachines, 2014, v. 5, n. 2, p. 204, doi. 10.3390/mi5020204

By:

Neugebauer, Ute;
Kurz, Christian;
Bocklitz, Thomas;
Berger, Tina;
Velten, Thomas;
Clement, Joachim H.;
Krafft, Christoph;
Popp, Jürgen

Publication type:

Article

Raman spectroscopic investigation of the human liver stem cell line HepaRG.

Published in:

Journal of Raman Spectroscopy, 2018, v. 49, n. 6, p. 935, doi. 10.1002/jrs.5392

By:

Ryabchykov, Oleg;
Bräutigam, Katharina;
Galler, Kerstin;
Neugebauer, Ute;
Mosig, Alexander;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Model transfer for Raman‐spectroscopy‐based bacterial classification.

Published in:

Journal of Raman Spectroscopy, 2018, v. 49, n. 4, p. 627, doi. 10.1002/jrs.5343

By:

Guo, Shuxia;
Heinke, Ralf;
Stöckel, Stephan;
Rösch, Petra;
Popp, Jürgen;
Bocklitz, Thomas

Publication type:

Article

Raman spectroscopic detection of Nickel impact on single Streptomyces cells - possible bioindicators for heavy metal contamination.

Published in:

Journal of Raman Spectroscopy, 2012, v. 43, n. 8, p. 1058, doi. 10.1002/jrs.3126

By:

Walter, Angela;
Kuhri, Susanne;
Reinicke, Martin;
Bocklitz, Thomas;
Schumacher, Wilm;
Rösch, Petra;
Merten, Dirk;
Büchel, Georg;
Kothe, Erika;
Popp, Jürgen

Publication type:

Article

A comprehensive study of classification methods for medical diagnosis.

Published in:

Journal of Raman Spectroscopy, 2009, v. 40, n. 12, p. 1759, doi. 10.1002/jrs.2529

By:

Bocklitz, Thomas;
Putsche, Melanie;
Stüber, Carsten;
Käs, Josef;
Niendorf, Axel;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Explainable artificial intelligence for spectroscopy data: a review.

Published in:

Pflügers Archiv: European Journal of Physiology, 2025, v. 477, n. 4, p. 603, doi. 10.1007/s00424-024-02997-y

By:

Contreras, Jhonatan;
Bocklitz, Thomas

Publication type:

Article

Modified PCA and PLS: Towards a better classification in Raman spectroscopy–based biological applications.

Published in:

Journal of Chemometrics, 2020, v. 34, n. 4, p. 1, doi. 10.1002/cem.3202

By:

Guo, Shuxia;
Rösch, Petra;
Popp, Jürgen;
Bocklitz, Thomas

Publication type:

Article

Multimodal image analysis in tissue diagnostics for skin melanoma.

Published in:

Journal of Chemometrics, 2018, v. 32, n. 1, p. 1, doi. 10.1002/cem.2963

By:

Shuxia Guo;
Pfeifenbring, Susanne;
Meyer, Tobias;
Ernst, Günther;
von Eggeling, Ferdinand;
Maio, Vincenza;
Massi, Daniela;
Cicchi, Riccardo;
Pavone, Francesco S.;
Popp, Jürgen;
Bocklitz, Thomas

Publication type:

Article

Correction of mosaicking artifacts in multimodal images caused by uneven illumination.

Published in:

Journal of Chemometrics, 2017, v. 31, n. 6, p. n/a, doi. 10.1002/cem.2901

By:

Chernavskaia, Olga;
Guo, Shuxia;
Meyer, Tobias;
Vogler, Nadine;
Akimov, Denis;
Heuke, Sandro;
Heintzmann, Rainer;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Correction of mosaicking artefacts in multimodal images caused by uneven illumination.

Published in:

Journal of Chemometrics, 2017, v. 31, n. 6, p. n/a, doi. 10.1002/cem.2908

By:

Chernavskaia, Olga;
Guo, Shuxia;
Meyer, Tobias;
Vogler, Nadine;
Akimov, Denis;
Heuke, Sandro;
Heintzmann, Rainer;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Raman Spectroscopic Imaging for the Real-Time Detection of Chemical Changes Associated with Docetaxel Exposure.

Published in:

ChemPhysChem, 2013, v. 14, n. 3, p. 550, doi. 10.1002/cphc.201200800

By:

Bräutigam, Katharina;
Bocklitz, Thomas;
Schmitt, Michael;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Comparison of conventional and shifted excitation Raman difference spectroscopy for bacterial identification.

Published in:

Journal of Raman Spectroscopy, 2022, v. 53, n. 7, p. 1285, doi. 10.1002/jrs.6360

By:

Lorenz, Björn;
Guo, Shuxia;
Raab, Christoph;
Leisching, Patrick;
Bocklitz, Thomas;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

FLIM data analysis based on Laguerre polynomial decomposition and machine-learning.

Published in:

Journal of Biomedical Optics, 2021, v. 26, n. 2, p. 22909, doi. 10.1117/1.JBO.26.2.022909

By:

Guo, Shuxia;
Silge, Anja;
Bae, Hyeonsoo;
Tolstik, Tatiana;
Meyer, Tobias;
Matziolis, Georg;
Schmitt, Michael;
Popp, Jürgen;
Bocklitz, Thomas

Publication type:

Article

Multiplex coherent anti-Stokes Raman scattering microspectroscopy of brain tissue with higher ranking data classification for biomedical imaging.

Published in:

Journal of Biomedical Optics, 2017, v. 22, n. 6, p. 1, doi. 10.1117/1.JBO.22.6.066005

By:

Pohling, Christoph;
Bocklitz, Thomas;
Duarte, Alex S.;
Emmanuello, Cinzia;
Ishikawa, Mariana S.;
Dietzeck, Benjamin;
Buckup, Tiago;
Uckermann, Ortrud;
Schackert, Gabriele;
Kirsch, Matthias;
Schmitt, Michael;
Popp, Jürgen;
Motzkus, Marcus

Publication type:

Article

Toward improving fine needle aspiration cytology by applying Raman microspectroscopy.

Published in:

Journal of Biomedical Optics, 2013, v. 18, n. 4, p. 1, doi. 10.1117/1.JBO.18.4.047001

By:

Becker-Putsche, Melanie;
Bocklitz, Thomas;
Clement, Joachim;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Review of Fluorescence Lifetime Imaging Microscopy (FLIM) Data Analysis Using Machine Learning.

Published in:

Journal of Experimental & Theoretical Analyses, 2023, v. 11, n. 1, p. 44, doi. 10.3390/jeta1010004

By:

Adhikari, Mou;
Houhou, Rola;
Hniopek, Julian;
Bocklitz, Thomas

Publication type:

Article

Review of Fluorescence Lifetime Imaging Microscopy (FLIM) Data Analysis Using Machine Learning.

Published in:

Journal of Experimental & Theoretical Analyses, 2023, v. 1, n. 1, p. 44, doi. 10.3390/jeta1010004

By:

Adhikari, Mou;
Houhou, Rola;
Hniopek, Julian;
Bocklitz, Thomas

Publication type:

Article

Correction: Dwivedi et al. SERS-Driven Ceftriaxone Detection in Blood Plasma: A Protein Precipitation Approach. Chemosensors 2024, 12 , 213.

Published in:

2025

By:

Dwivedi, Aradhana;
Ryabchykov, Oleg;
Liu, Chen;
Farnesi, Edoardo;
Schmidt, Michael Stenbæk;
Bocklitz, Thomas;
Popp, Jürgen;
Cialla-May, Dana

Publication type:

Correction Notice

SERS-Driven Ceftriaxone Detection in Blood Plasma: A Protein Precipitation Approach.

Published in:

Chemosensors, 2024, v. 12, n. 10, p. 213, doi. 10.3390/chemosensors12100213

By:

Dwivedi, Aradhana;
Ryabchykov, Oleg;
Liu, Chen;
Farnesi, Edoardo;
Schmidt, Michael Stenbæk;
Bocklitz, Thomas;
Popp, Jürgen;
Cialla-May, Dana

Publication type:

Article

Beyond endoscopic assessment in inflammatory bowel disease: real-time histology of disease activity by non-linear multimodal imaging.

Published in:

Scientific Reports, 2016, p. 29239, doi. 10.1038/srep29239

By:

Chernavskaia, Olga;
Heuke, Sandro;
Vieth, Michael;
Friedrich, Oliver;
Schürmann, Sebastian;
Atreya, Raja;
Stallmach, Andreas;
Neurath, Markus F.;
Waldner, Maximilian;
Petersen, Iver;
Schmitt, Michael;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Single cell analysis in native tissue: Quantification of the retinoid content of hepatic stellate cells.

Published in:

Scientific Reports, 2016, p. 24155, doi. 10.1038/srep24155

By:

Galler, Kerstin;
Requardt, Robert Pascal;
Glaser, Uwe;
Markwart, Robby;
Bocklitz, Thomas;
Bauer, Michael;
Popp, Jürgen;
Neugebauer, Ute

Publication type:

Article

Chemometric analysis in Raman spectroscopy from experimental design to machine learning–based modeling.

Published in:

Nature Protocols, 2021, v. 16, n. 12, p. 5426, doi. 10.1038/s41596-021-00620-3

By:

Guo, Shuxia;
Popp, Jürgen;
Bocklitz, Thomas

Publication type:

Article

Fast differentiation of SIRS and sepsis from blood plasma of ICU patients using Raman spectroscopy.

Published in:

Journal of Biophotonics, 2014, v. 7, n. 3/4, p. 232, doi. 10.1002/jbio.201400010

By:

Neugebauer, Ute;
Trenkmann, Sabine;
Bocklitz, Thomas;
Schmerler, Diana;
Kiehntopf, Michael;
Popp, Jürgen

Publication type:

Article

Identification and differentiation of single cells from peripheral blood by Raman spectroscopic imaging.

Published in:

Journal of Biophotonics, 2010, v. 3, n. 8/9, p. 579, doi. 10.1002/jbio.201000020

By:

Neugebauer, Ute;
Clement, Joachim H.;
Bocklitz, Thomas;
Krafft, Christoph;
Popp, Jürgen

Publication type:

Article

Towards a quantitative SERS approach - online monitoring of analytes in a microfluidic system with isotope-edited internal standards.

Published in:

Journal of Biophotonics, 2009, v. 2, n. 4, p. 232, doi. 10.1002/jbio.200810069

By:

März, Anne;
Ackermann, Katrin R.;
Malsch, Daniéll;
Bocklitz, Thomas;
Henkel, Thomas;
Popp, Jürgen

Publication type:

Article

Fully convolutional networks in multimodal nonlinear microscopy images for automated detection of head and neck carcinoma: Pilot study.

Published in:

Head & Neck, 2019, v. 41, n. 1, p. 116, doi. 10.1002/hed.25489

By:

Rodner, Erik;
Bocklitz, Thomas;
von Eggeling, Ferdinand;
Ernst, Günther;
Chernavskaia, Olga;
Popp, Jürgen;
Denzler, Joachim;
Guntinas‐Lichius, Orlando

Publication type:

Article

Multimodal nonlinear microscopy of head and neck carcinoma - toward surgery assisting frozen section analysis.

Published in:

Head & Neck, 2016, v. 38, n. 10, p. 1545, doi. 10.1002/hed.24477

By:

Heuke, Sandro;
Chernavskaia, Olga;
Bocklitz, Thomas;
Legesse, Fisseha Bekele;
Meyer, Tobias;
Akimov, Denis;
Dirsch, Olaf;
Ernst, Günther;
von Eggeling, Ferdinand;
Petersen, Iver;
Guntinas–Lichius, Orlando;
Schmitt, Michael;
Popp, Jürgen

Publication type:

Article

Label-Free Molecular Imaging of Biological Cells and Tissues by Linear and Nonlinear Raman Spectroscopic Approaches.

Published in:

Angewandte Chemie International Edition, 2017, v. 56, n. 16, p. 4392, doi. 10.1002/anie.201607604

By:

Krafft, Christoph;
Schmitt, Michael;
Schie, Iwan W.;
Cialla-May, Dana;
Matthäus, Christian;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Pseudo-HE images derived from CARS/TPEF/SHG multimodal imaging in combination with Raman-spectroscopy as a pathological screening tool.

Published in:

2016

By:

Bocklitz, Thomas W.;
Salah, Firas Subhi;
Vogler, Nadine;
Heuke, Sandro;
Chernavskaia, Olga;
Schmidt, Carsten;
Waldner, Maximilian J.;
Greten, Florian R.;
Bräuer, Rolf;
Schmitt, Michael;
Stallmach, Andreas;
Petersen, Iver;
Popp, Jürgen

Publication type:

journal article

The application of UV resonance Raman spectroscopy for the differentiation of clinically relevant Candida species.

Published in:

Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 23, p. 5839, doi. 10.1007/s00216-018-1196-2

By:

Silge, Anja;
Heinke, Ralf;
Bocklitz, Thomas;
Wiegand, Cornelia;
Hipler, Uta-Christina;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

The interaction of an amino-modified ZrO nanomaterial with macrophages-an in situ investigation by Raman microspectroscopy.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 21, p. 5935, doi. 10.1007/s00216-016-9710-x

By:

Silge, Anja;
Bocklitz, Thomas;
Ossig, Rainer;
Schnekenburger, Jürgen;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Single particle analysis of herpes simplex virus: comparing the dimensions of one and the same virions via atomic force and scanning electron microscopy.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 15, p. 4035, doi. 10.1007/s00216-016-9492-1

By:

Kämmer, Evelyn;
Götz, Isabell;
Bocklitz, Thomas;
Stöckel, Stephan;
Dellith, Andrea;
Cialla-May, Dana;
Weber, Karina;
Zell, Roland;
Dellith, Jan;
Deckert, Volker;
Popp, Jürgen

Publication type:

Article

Quantitative SERS studies by combining LOC-SERS with the standard addition method.

Published in:

Analytical & Bioanalytical Chemistry, 2015, v. 407, n. 29, p. 8925, doi. 10.1007/s00216-015-9045-z

By:

Kämmer, Evelyn;
Olschewski, Konstanze;
Stöckel, Stephan;
Rösch, Petra;
Weber, Karina;
Cialla-May, Dana;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Combined fiber probe for fluorescence lifetime and Raman spectroscopy.

Published in:

Analytical & Bioanalytical Chemistry, 2015, v. 407, n. 27, p. 8291, doi. 10.1007/s00216-015-8800-5

By:

Dochow, Sebastian;
Ma, Dinglong;
Latka, Ines;
Bocklitz, Thomas;
Hartl, Brad;
Bec, Julien;
Fatakdawala, Hussain;
Marple, Eric;
Urmey, Kirk;
Wachsmann-Hogiu, Sebastian;
Schmitt, Michael;
Marcu, Laura;
Popp, Jürgen

Publication type:

Article

Novel workflow for combining Raman spectroscopy and MALDI-MSI for tissue based studies.

Published in:

Analytical & Bioanalytical Chemistry, 2015, v. 407, n. 26, p. 7865, doi. 10.1007/s00216-015-8987-5

By:

Bocklitz, Thomas;
Bräutigam, Katharina;
Urbanek, Annett;
Hoffmann, Franziska;
Eggeling, Ferdinand;
Ernst, Günther;
Schmitt, Michael;
Schubert, Ulrich;
Guntinas-Lichius, Orlando;
Popp, Jürgen

Publication type:

Article

A study of Docetaxel-induced effects in MCF-7 cells by means of Raman microspectroscopy.

Published in:

Analytical & Bioanalytical Chemistry, 2012, v. 404, n. 2, p. 745, doi. 10.1007/s00216-012-5887-9

By:

Hartmann, Katharina;
Becker-Putsche, Melanie;
Bocklitz, Thomas;
Pachmann, Katharina;
Niendorf, Axel;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Raman spectroscopic detection of physiology changes in plasmid-bearing Escherichia coli with and without antibiotic treatment.

Published in:

Analytical & Bioanalytical Chemistry, 2011, v. 400, n. 9, p. 2763, doi. 10.1007/s00216-011-4819-4

By:

Walter, Angela;
Reinicke, Martin;
Bocklitz, Thomas;
Schumacher, Wilm;
Rösch, Petra;
Kothe, Erika;
Popp, Jürgen

Publication type:

Article

Markerfreie molekulare Bildgebung biologischer Zellen und Gewebe durch lineare und nichtlineare Raman-spektroskopische Ansätze.

Published in:

Angewandte Chemie, 2017, v. 129, n. 16, p. 4458, doi. 10.1002/ange.201607604

By:

Krafft, Christoph;
Schmitt, Michael;
Schie, Iwan W.;
Cialla ‐ May, Dana;
Matthäus, Christian;
Bocklitz, Thomas;
Popp, Jürgen

Publication type:

Article

Automatic label‐free detection of breast cancer using nonlinear multimodal imaging and the convolutional neural network ResNet50.

Published in:

Translational Biophotonics, 2019, v. 1, n. 1/2, p. N.PAG, doi. 10.1002/tbio.201900003

By:

Ali, Nairveen;
Quansah, Elsie;
Köhler, Katarina;
Meyer, Tobias;
Schmitt, Michael;
Popp, Jürgen;
Niendorf, Axel;
Bocklitz, Thomas

Publication type:

Article

Deep Learning for Raman Spectroscopy: A Review.

Published in:

Analytica, 2022, v. 3, n. 3, p. 287, doi. 10.3390/analytica3030020

By:

Luo, Ruihao;
Popp, Juergen;
Bocklitz, Thomas

Publication type:

Article

Trends in artificial intelligence, machine learning, and chemometrics applied to chemical data.

Published in:

Analytical Science Advances, 2021, v. 2, n. 3/4, p. 128, doi. 10.1002/ansa.202000162

By:

Houhou, Rola;
Bocklitz, Thomas

Publication type:

Article

Deep learning-based classification of blue light cystoscopy imaging during transurethral resection of bladder tumors.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-91081-x

By:

Ali, Nairveen;
Bolenz, Christian;
Todenhöfer, Tilman;
Stenzel, Arnulf;
Deetmar, Peer;
Kriegmair, Martin;
Knoll, Thomas;
Porubsky, Stefan;
Hartmann, Arndt;
Popp, Jürgen;
Kriegmair, Maximilian C.;
Bocklitz, Thomas

Publication type:

Article

Raman spectroscopic cellomics for the detection of SARS‐CoV‐2‐associated neutrophil activation after TNF‐α stimulation.

Published in:

Clinical & Translational Medicine, 2022, v. 12, n. 12, p. 1, doi. 10.1002/ctm2.1139

By:

Pistiki, Aikaterini;
Hornung, Franziska;
Silge, Anja;
Ramoji, Anuradha;
Ryabchykov, Oleg;
Bocklitz, Thomas W.;
Weber, Karina;
Löffler, Bettina;
Popp, Jürgen;
Deinhardt‐Emmer, Stefanie

Publication type:

Article

Raman Spectroscopic Differentiation of Streptococcus pneumoniae From Other Streptococci Using Laboratory Strains and Clinical Isolates.

Published in:

Frontiers in Cellular & Infection Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fcimb.2022.930011

By:

Dahms, Marcel;
Eiserloh, Simone;
Rödel, Jürgen;
Makarewicz, Oliwia;
Bocklitz, Thomas;
Popp, Jürgen;
Neugebauer, Ute

Publication type:

Article

Shedding light on host niches: label-free in situ detection of M ycobacterium gordonae via carotenoids in macrophages by Raman microspectroscopy.

Published in:

Cellular Microbiology, 2015, v. 17, n. 6, p. 832, doi. 10.1111/cmi.12404

By:

Silge, Anja;
Abdou, Elias;
Schneider, Kilian;
Meisel, Susann;
Bocklitz, Thomas;
Lu‐Walther, Hui‐Wen;
Heintzmann, Rainer;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Label‐free differentiation of clinical E. coli and Klebsiella isolates with Raman spectroscopy.

Published in:

Journal of Biophotonics, 2022, v. 15, n. 7, p. 1, doi. 10.1002/jbio.202200005

By:

Nakar, Amir;
Pistiki, Aikaterini;
Ryabchykov, Oleg;
Bocklitz, Thomas;
Rösch, Petra;
Popp, Jürgen

Publication type:

Article

Deep learning a boon for biophotonics?

Published in:

Journal of Biophotonics, 2020, v. 13, n. 6, p. 1, doi. 10.1002/jbio.201960186

By:

Pradhan, Pranita;
Guo, Shuxia;
Ryabchykov, Oleg;
Popp, Juergen;
Bocklitz, Thomas W.

Publication type:

Article

Towards Raman spectroscopy of urine as screening tool.

Published in:

Journal of Biophotonics, 2020, v. 13, n. 1, p. N.PAG, doi. 10.1002/jbio.201900143

By:

Žukovskaja, Olga;
Ryabchykov, Oleg;
Straßburger, Maria;
Heinekamp, Thorsten;
Brakhage, Axel A.;
Hennings, Christopher J.;
Hübner, Christian A.;
Wegmann, Michael;
Cialla‐May, Dana;
Bocklitz, Thomas W.;
Weber, Karina;
Popp, Jürgen

Publication type:

Article