Found: 331
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CYPSI: a structure-based interface for cytochrome P450s and ligands in Arabidopsis thaliana.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-332
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Generalization of the normal-exponential model: exploration of a more accurate parametrisation for the signal distribution on Illumina BeadArrays.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-329
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GSA-PCA: gene set generation by principal component analysis of the Laplacian matrix of a metabolic network.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-197
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- Article
Copy number variation signature to predict human ancestry.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-336
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Isotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matching.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-291
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A novel approach for biomarker selection and the integration of repeated measures experiments from two assays.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-325
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ESTclean: a cleaning tool for next-gen transcriptome shotgun sequencing.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-247
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An algorithm for chemical genomic profiling that minimizes batch effects: bucket evaluations.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-245
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- Article
Improving stability and understandability of genotype-phenotype mapping in Saccharomyces using regularized variable selection in L-PLS regression.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-327
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Gene Fusion Markup Language: a prototype for exchanging gene fusion data.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-269
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Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-259
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Local functional descriptors for surface comparison based binding prediction.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-314
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- Article
Multi-scale RNA comparison based on RNA triple vector curve representation.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-280
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- Article
Finding quasi-modules of human and viral miRNAs: a case study of human cytomegalovirus (HCMV).
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-322
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- Article
iMS2Flux -- a high--throughput processing tool for stable isotope labeled mass spectrometric data used for metabolic flux analysis.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-295
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- Article
Estimating relative abundances of proteins from shotgun proteomics data.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-308
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- Article
The tree alignment problem.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-293
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- Article
Copy Number Variation detection from 1000 Genomes project exon capture sequencing data.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-305
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- Article
Multiple-platform data integration method with application to combined analysis of microarray and proteomic data.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-320
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- Article
The Process-Interaction-Model: a common representation of rule-based and logical models allows studying signal transduction on different levels of detail.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-251
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- Article
Multiple graph regularized protein domain ranking.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-307
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- Article
Improved model quality assessment using ProQ2.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-224
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Process attributes in bio-ontologies.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-217
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Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-144
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Unlocking the potential of publicly available microarray data using inSilicoDb and inSilicoMerging R/Bioconductor packages.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-335
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Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-331
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- Article
Fast detection of de novo copy number variants from SNP arrays for case-parent trios.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-330
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Comparison of co-expression measures: mutual information, correlation, and model based indices.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-328
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- Article
A computational pipeline for the development of multi-marker bio-signature panels and ensemble classifiers.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-326
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- Article
Flexible and efficient genome tiling design with penalized uniqueness score.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-323
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- Article
TeraStitcher - A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-316
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- Article
Gains of ubiquitylation sites in highly conserved proteins in the human lineage.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-306
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- Article
mGOASVM: Multi-label protein subcellular localization based on gene ontology and support vector machines.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-290
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- Article
Exploiting protein flexibility to predict the location of allosteric sites.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-273
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- Article
Improving protein coreference resolution by simple semantic classification.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-304
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- Article
Clustering of time-course gene expression profiles using normal mixture models with autoregressive random effects.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-300
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- Article
Improving accuracy for cancer classification with a new algorithm for genes selection.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-298
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A quantitative genetic and epigenetic model of complex traits.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-274
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MCMC-ODPR: Primer design optimization using Markov Chain Monte Carlo sampling.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-287
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- Article
Denoising PCR-amplified metagenome data.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-283
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- Article
Cascaded discrimination of normal, abnormal, and confounder classes in histopathology: Gleason grading of prostate cancer.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-282
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- Article
Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-281
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- Article
Combing the hairball with BioFabric: a new approach for visualization of large networks.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-275
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- Article
ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-279
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- Article
Bayesian semiparametric regression models to characterize molecular evolution.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-278
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- Article
Simple binary segmentation frameworks for identifying variation in DNA copy number.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-277
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- Article
Coral: an integrated suite of visualizations for comparing clusterings.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-276
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- Article
G-NEST: a gene neighborhood scoring tool to identify co-conserved, co-expressed genes.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-253
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- Article
Tissue-based Alzheimer gene expression markers-comparison of multiple machine learning approaches and investigation of redundancy in small biomarker sets.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-266
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- Article
Coalescent: an open-source and scalable framework for exact calculations in coalescent theory.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-257
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- Article