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Coarse-grained modeling of conformational transitions underlying the processive stepping of myosin V dimer along filamentous actin.
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- Proteins, 2011, v. 79, n. 7, p. 2291, doi. 10.1002/prot.23055
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Structural characterization of the mitomycin 7- O-methyltransferase.
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- Proteins, 2011, v. 79, n. 7, p. 2181, doi. 10.1002/prot.23040
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Toward the quantum chemical calculation of nuclear magnetic resonance chemical shifts of proteins.
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- Proteins, 2011, v. 79, n. 7, p. 2189, doi. 10.1002/prot.23041
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Crystal structure of Bacteroides thetaiotaomicron TetX2: A tetracycline degrading monooxygenase at 2.8 Å resolution.
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- Proteins, 2011, v. 79, n. 7, p. 2335, doi. 10.1002/prot.23052
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Conformational dynamics of.
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- Proteins, 2011, v. 79, n. 7, p. 2097, doi. 10.1002/prot.23030
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In silico predictions of LH2 ring sizes from the crystal structure of a single subunit using molecular dynamics simulations.
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- Proteins, 2011, v. 79, n. 7, p. 2306, doi. 10.1002/prot.23056
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Distinguishing two groups of flavin reductases by analyzing the protonation state of an active site carboxylic acid.
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- Proteins, 2011, v. 79, n. 7, p. 2076, doi. 10.1002/prot.23027
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Statistical analysis of protein structures suggests that buried ionizable residues in proteins are hydrogen bonded or form salt bridges.
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- Proteins, 2011, v. 79, n. 7, p. 2027, doi. 10.1002/prot.23067
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Computer simulation study of amyloid fibril formation by palindromic sequences in prion peptides.
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- Proteins, 2011, v. 79, n. 7, p. 2132, doi. 10.1002/prot.23034
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Observing the osmophobic effect in action at the single molecule level.
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- Proteins, 2011, v. 79, n. 7, p. 2214, doi. 10.1002/prot.23045
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Protein loop selection using orientation-dependent force fields derived by parameter optimization.
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- Proteins, 2011, v. 79, n. 7, p. 2260, doi. 10.1002/prot.23051
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Structural memory of natively unfolded tau protein detected by small-angle X-ray scattering.
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- Proteins, 2011, v. 79, n. 7, p. 2122, doi. 10.1002/prot.23033
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Leukocyte integrin αLβ2 transmembrane association dynamics revealed by coarse-grained molecular dynamics simulations.
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- Proteins, 2011, v. 79, n. 7, p. 2203, doi. 10.1002/prot.23044
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- Article
Crystal structure of the catalytic domain of cholesterol-α-glucosyltransferase from Helicobacter pylori.
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- Proteins, 2011, v. 79, n. 7, p. 2321, doi. 10.1002/prot.23038
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- Article
Crystal structure of sulfolobus tokodaii sua5 complexed with.
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- Proteins, 2011, v. 79, n. 7, p. 2065, doi. 10.1002/prot.23026
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Analysis of water patterns in protein kinase binding sites.
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- Proteins, 2011, v. 79, n. 7, p. 2109, doi. 10.1002/prot.23032
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Quaternion-based definition of protein secondary structure straightness and its relationship to Ramachandran angles.
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- Proteins, 2011, v. 79, n. 7, p. 2172, doi. 10.1002/prot.23037
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Tat peptide-calmodulin binding studies and bioinformatics of HIV-1 protein-calmodulin interactions.
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- Proteins, 2011, v. 79, n. 7, p. 2233, doi. 10.1002/prot.23048
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A parameterized, continuum electrostatic model for predicting protein p K.
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- Proteins, 2011, v. 79, n. 7, p. 2044, doi. 10.1002/prot.23019
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The role of tyrosine 71 in modulating the flap conformations of BACE1.
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- Proteins, 2011, v. 79, n. 7, p. 2247, doi. 10.1002/prot.23050
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Structural insights into the metal binding properties of hypothetical protein MJ0754 from Methanococcus jannaschii.
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- Proteins, 2011, v. 79, n. 7, p. 2358, doi. 10.1002/prot.23066
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The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase.
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- Proteins, 2011, v. 79, n. 7, p. 2327, doi. 10.1002/prot.23043
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Binding to the open conformation of HIV-1 protease.
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- Proteins, 2011, v. 79, n. 7, p. 2282, doi. 10.1002/prot.23054
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Free-energy function for discriminating the native fold of a protein from misfolded decoys.
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- Proteins, 2011, v. 79, n. 7, p. 2161, doi. 10.1002/prot.23036
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Improving taxonomy-based protein fold recognition by using global and local features.
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- Proteins, 2011, v. 79, n. 7, p. 2053, doi. 10.1002/prot.23025
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Glucose interactions with a model peptide.
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- Proteins, 2011, v. 79, n. 7, p. 2224, doi. 10.1002/prot.23047
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Crystal structure of a novel dimer form of FlgD from P. aeruginosa PAO1.
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- Proteins, 2011, v. 79, n. 7, p. 2346, doi. 10.1002/prot.23058
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Analysis of protein function and its prediction from amino acid sequence.
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- Proteins, 2011, v. 79, n. 7, p. 2086, doi. 10.1002/prot.23029
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Crystallographic and microcalorimetric analyses reveal the structural basis for high arginine specificity in the Salmonella enterica serovar Typhimurium periplasmic binding protein STM4351.
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- Proteins, 2011, v. 79, n. 7, p. 2352, doi. 10.1002/prot.23060
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Solution structure of the protein lipocalin 12 from rat epididymis.
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- Proteins, 2011, v. 79, n. 7, p. 2316, doi. 10.1002/prot.23031
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Fast approximations of the rotational diffusion tensor and their application to structural assembly of molecular complexes.
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- Proteins, 2011, v. 79, n. 7, p. 2268, doi. 10.1002/prot.23053
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Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
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- Proteins, 2011, v. 79, n. 7, p. 2146, doi. 10.1002/prot.23035
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Structural modeling and molecular dynamics simulation of the actin filament.
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- Proteins, 2011, v. 79, n. 7, p. 2033, doi. 10.1002/prot.23017
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The PR/SET domain in PRDM4 is preceded by a zinc knuckle.
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- Proteins, 2011, v. 79, n. 7, p. 2341, doi. 10.1002/prot.23057
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Early days of protein hydrogen exchange: 1954-1972.
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- Proteins, 2011, v. 79, n. 7, p. 2021, doi. 10.1002/prot.23039
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