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Towards a genome-wide transcriptogram: the Saccharomyces cerevisiae case.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3005, doi. 10.1093/nar/gkq1269
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Mechanistic insights into an engineered riboswitch: a switching element which confers riboswitch activity.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3363, doi. 10.1093/nar/gkq946
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Mutations in the intersubunit bridge regions of 16S rRNA affect decoding and subunit–subunit interactions on the 70S ribosome.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3321, doi. 10.1093/nar/gkq1253
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The translational repressor 4E-BP called to order by eIF4E: new structural insights by SAXS.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3496, doi. 10.1093/nar/gkq1306
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The suboptimal structures find the optimal RNAs: homology search for bacterial non-coding RNAs using suboptimal RNA structures.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3418, doi. 10.1093/nar/gkq1186
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VCre/VloxP and SCre/SloxP: new site-specific recombination systems for genome engineering.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e49, doi. 10.1093/nar/gkq1280
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A novel method for the efficient and selective identification of 5-hydroxymethylcytosine in genomic DNA.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e55, doi. 10.1093/nar/gkr051
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Arxes: retrotransposed genes required for adipogenesis.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3224, doi. 10.1093/nar/gkq1289
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ATP independent type IB topoisomerase of Leishmania donovani is stimulated by ATP: an insight into the functional mechanism.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3295, doi. 10.1093/nar/gkq1284
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Two groups of phenylalanine biosynthetic operon leader peptides genes: a high level of apparently incidental frameshifting in decoding Escherichia coli pheL.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3079, doi. 10.1093/nar/gkq1272
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Artificial trans-encoded small non-coding RNAs specifically silence the selected gene expression in bacteria.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e50, doi. 10.1093/nar/gkr034
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Structures and activities of archaeal members of the LigD 3′-phosphoesterase DNA repair enzyme superfamily.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3310, doi. 10.1093/nar/gkq1163
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Determinants of Nam8-dependent splicing of meiotic pre-mRNAs.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3427, doi. 10.1093/nar/gkq1328
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RhoA activation participates in rearrangement of processing bodies and release of nucleated AU-rich mRNAs.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3446, doi. 10.1093/nar/gkq1302
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Amplification ratio control system for copy number variation genotyping.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e54, doi. 10.1093/nar/gkr046
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Molecular breeding of polymerases for resistance to environmental inhibitors.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e51, doi. 10.1093/nar/gkq1360
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Nucleosome accessibility governed by the dimer/tetramer interface.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3093, doi. 10.1093/nar/gkq1279
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Genome-wide evidence for an essential role of the human Staf/ZNF143 transcription factor in bidirectional transcription.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3116, doi. 10.1093/nar/gkq1301
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The relationship between HIV-1 genome RNA dimerization, virion maturation and infectivity†.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3404, doi. 10.1093/nar/gkq1314
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Structural and functional characterization of the Mycobacterium tuberculosis uridine monophosphate kinase: insights into the allosteric regulation†.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3458, doi. 10.1093/nar/gkq1250
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Regulation of nucleotide excision repair activity by transcriptional and post-transcriptional control of the XPA protein.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3176, doi. 10.1093/nar/gkq1318
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Fox-3 and PSF interact to activate neural cell-specific alternative splicing.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3064, doi. 10.1093/nar/gkq1221
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Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3188, doi. 10.1093/nar/gkq1242
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Different sequence signatures in the upstream regions of plant and animal tRNA genes shape distinct modes of regulation.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3331, doi. 10.1093/nar/gkq1257
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Poly (ADP-ribose) polymerase (PARP) is not involved in base excision repair but PARP inhibition traps a single-strand intermediate.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3166, doi. 10.1093/nar/gkq1241
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Nucleic Acids Research.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. i, doi. 10.1093/nar/gkr327
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Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3204, doi. 10.1093/nar/gkq1228
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Stability of telomeric G-quadruplexes.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3282, doi. 10.1093/nar/gkq1292
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The chromodomains of CHD1 are critical for enzymatic activity but less important for chromatin localization.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3103, doi. 10.1093/nar/gkq1298
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Interaction of STAT6 with its co-activator SRC-1/NCoA-1 is regulated by dephosphorylation of the latter via PP2A.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3255, doi. 10.1093/nar/gkq1225
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Structural and functional analysis of the Rous Sarcoma virus negative regulator of splicing and demonstration of its activation by the 9G8 SR protein.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3388, doi. 10.1093/nar/gkq1114
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Unexpected origins of the enhanced pairing affinity of 2′-fluoro-modified RNA.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3482, doi. 10.1093/nar/gkq1270
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An upstream ORF with non-AUG start codon is translated in vivo but dispensable for translational control of GCN4 mRNA.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3128, doi. 10.1093/nar/gkq1251
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Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3240, doi. 10.1093/nar/gkq1281
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Conservation defines functional motifs in the squint/nodal-related 1 RNA dorsal localization element.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3340, doi. 10.1093/nar/gkq1185
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Rescue of non-sense mutated p53 tumor suppressor gene by aminoglycosides.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3350, doi. 10.1093/nar/gkq1277
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Thermophoretic melting curves quantify the conformation and stability of RNA and DNA.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e52, doi. 10.1093/nar/gkr035
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A novel regulatory circuit in base excision repair involving AP endonuclease 1, Creb1 and DNA polymerase β.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3156, doi. 10.1093/nar/gkq1142
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Folding of the lysine riboswitch: importance of peripheral elements for transcriptional regulation.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3373, doi. 10.1093/nar/gkq1247
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Pre-replication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3141, doi. 10.1093/nar/gkq1276
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Efficient detection of RNA–protein interactions using tethered RNAs.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. e53, doi. 10.1093/nar/gkq1316
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c-MYC coordinately regulates ribosomal gene chromatin remodeling and Pol I availability during granulocyte differentiation.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3267, doi. 10.1093/nar/gkq1205
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Formation of stress-specific p53 binding patterns is influenced by chromatin but not by modulation of p53 binding affinity to response elements†.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3053, doi. 10.1093/nar/gkq1209
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Transition dynamics and selection of the distinct S-DNA and strand unpeeling modes of double helix overstretching.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3473, doi. 10.1093/nar/gkq1278
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Expression of CD44 3′-untranslated region regulates endogenous microRNA functions in tumorigenesis and angiogenesis.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3026, doi. 10.1093/nar/gkq1003
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Selective interactions of boundaries with upstream region of Abd-B promoter in Drosophila bithorax complex and role of dCTCF in this process.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3042, doi. 10.1093/nar/gkq1248
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Structure-based prediction of RNA-binding domains and RNA-binding sites and application to structural genomics targets.
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- Nucleic Acids Research, 2011, v. 39, n. 8, p. 3017, doi. 10.1093/nar/gkq1266
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Subscriptions.
- Published in:
- Nucleic Acids Research, 2011, v. 39, n. 8, p. iii, doi. 10.1093/nar/gkr329
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- Article