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Community assessment of methods to deconvolve cellular composition from bulk gene expression.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-50618-0
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- Publication type:
- Article
WNT/β-catenin pathway activation in Wilms tumors: A unifying mechanism with multiple entries?
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- Genes, Chromosomes & Cancer, 2009, v. 48, n. 9, p. 816, doi. 10.1002/gcc.20686
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- Publication type:
- Article
Expression-based subtypes define pathologic response to neoadjuvant immune-checkpoint inhibitors in muscle-invasive bladder cancer.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37568-9
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- Article
Review of Prognostic Expression Markers for Clear Cell Renal Cell Carcinoma.
- Published in:
- Frontiers in Oncology, 2021, v. 11, p. N.PAG, doi. 10.3389/fonc.2021.643065
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- Publication type:
- Article
Integrated multi-omics analysis of oligodendroglial tumours identifies three subgroups of 1p/19q co-deleted gliomas.
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- Nature Communications, 2016, v. 7, n. 4, p. 11263, doi. 10.1038/ncomms11263
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- Publication type:
- Article
TCF12 is mutated in anaplastic oligodendroglioma.
- Published in:
- Nature Communications, 2015, v. 6, n. 6, p. 7207, doi. 10.1038/ncomms8207
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- Publication type:
- Article
Multi-omics analysis defines core genomic alterations in pheochromocytomas and paragangliomas.
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- Nature Communications, 2015, v. 6, n. 1, p. 6044, doi. 10.1038/ncomms7044
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- Publication type:
- Article
The murine Microenvironment Cell Population counter method to estimate abundance of tissue-infiltrating immune and stromal cell populations in murine samples using gene expression.
- Published in:
- Genome Medicine, 2020, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13073-020-00783-w
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- Publication type:
- Article
Anaplastic oligodendrogliomas with 1p19q codeletion have a proneural gene expression profile.
- Published in:
- Molecular Cancer, 2008, v. 7, p. 1, doi. 10.1186/1476-4598-7-41
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- Publication type:
- Article
Wnt, glucocorticoid and cellular prion protein cooperate to drive a mesenchymal phenotype with poor prognosis in colon cancer.
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- Journal of Translational Medicine, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12967-024-05164-0
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- Publication type:
- Article
Dissecting heterogeneity in malignant pleural mesothelioma through histo-molecular gradients for clinical applications.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-09307-6
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- Publication type:
- Article
Recurrent activating mutations of PPARγ associated with luminal bladder tumors.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08157-y
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- Publication type:
- Article
Transcriptome Analysis of lncRNAs in Pheochromocytomas and Paragangliomas.
- Published in:
- 2019
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- Publication type:
- journal article
High-resolution analysis of DNA copy number alterations in rectal cancer.
- Published in:
- Strahlentherapie und Onkologie, 2014, v. 190, n. 11, p. 1028, doi. 10.1007/s00066-014-0659-4
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- Publication type:
- Article
High-resolution analysis of DNA copy number alterations in rectal cancer: correlation with metastasis, survival, and mRNA expression.
- Published in:
- 2014
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- Publication type:
- journal article
Assessing reproducibility of matrix factorization methods in independent transcriptomes.
- Published in:
- Bioinformatics, 2019, v. 35, n. 21, p. 4307, doi. 10.1093/bioinformatics/btz225
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- Publication type:
- Article
IGF2 Promotes Growth of Adrenocortical Carcinoma Cells, but Its Overexpression Does Not Modify Phenotypic and Molecular Features of Adrenocortical Carcinoma.
- Published in:
- PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0103744
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- Publication type:
- Article
The Warburg Effect Is Genetically Determined in Inherited Pheochromocytomas.
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- PLoS ONE, 2009, v. 4, n. 9, p. 1, doi. 10.1371/journal.pone.0007094
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- Publication type:
- Article
Multilayer spectrum of intratumoral heterogeneity in basal bladder cancer.
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- Journal of Pathology, 2022, v. 256, n. 1, p. 108, doi. 10.1002/path.5813
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- Publication type:
- Article
Gene expression classification of colon cancer into molecular subtypes: characterization, validation, and prognostic value.
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- 2013
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- Publication type:
- journal article
Gene Expression Classification of Colon Cancer into Molecular Subtypes: Characterization, Validation, and Prognostic Value
- Published in:
- PLoS Medicine, 2013, v. 10, n. 5, p. 1, doi. 10.1371/journal.pmed.1001453
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- Publication type:
- Article
EGFR as a potential therapeutic target for a subset of muscle-invasive bladder cancers presenting a basal-like phenotype.
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- Science Translational Medicine, 2014, v. 6, n. 244, p. 1, doi. 10.1126/scitranslmed.3008970
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- Publication type:
- Article
Ectopic Activation of Germline and Placental Genes Identifies Aggressive Metastasis-Prone Lung Cancers.
- Published in:
- Science Translational Medicine, 2013, v. 5, n. 186, p. 1, doi. 10.1126/scitranslmed.3005723
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- Publication type:
- Article
Hepatocyte nuclear factor 1α suppresses steatosis-associated liver cancer by inhibiting PPARγ transcription.
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- 2017
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- Publication type:
- journal article
Large-scale pan-cancer analysis reveals broad prognostic association between TGF-β ligands, not Hedgehog, and GLI1/2 expression in tumors.
- Published in:
- Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71559-w
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- Publication type:
- Article
Integrating tumor microenvironment with cancer molecular classifications.
- Published in:
- Genome Medicine, 2015, v. 7, p. 1, doi. 10.1186/s13073-015-0241-4
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- Publication type:
- Article
Transcriptomic analysis of the tumor microenvironment to guide prognosis and immunotherapies.
- Published in:
- Cancer Immunology, Immunotherapy, 2018, v. 67, n. 6, p. 981, doi. 10.1007/s00262-017-2058-z
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- Publication type:
- Article
Integrated molecular characterization of chondrosarcoma reveals critical determinants of disease progression.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-12525-7
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- Publication type:
- Article
MicroRNAs Targeting HIF-2α, VEGFR1 and/or VEGFR2 as Potential Predictive Biomarkers for VEGFR Tyrosine Kinase and HIF-2α Inhibitors in Metastatic Clear-Cell Renal Cell Carcinoma.
- Published in:
- Cancers, 2021, v. 13, n. 12, p. 3099, doi. 10.3390/cancers13123099
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- Publication type:
- Article
Preferential Response of Basal-Like Head and Neck Squamous Cell Carcinoma Cell Lines to EGFR-Targeted Therapy Depending on EREG-Driven Oncogenic Addiction.
- Published in:
- Cancers, 2019, v. 11, n. 6, p. 795, doi. 10.3390/cancers11060795
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- Publication type:
- Article
The consensus molecular subtypes of colorectal cancer.
- Published in:
- Nature Medicine, 2015, v. 21, n. 11, p. 1350, doi. 10.1038/nm.3967
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- Publication type:
- Article
The Tumor Microenvironment in the Response to Immune Checkpoint Blockade Therapies.
- Published in:
- Frontiers in Immunology, 2020, v. 11, p. 1, doi. 10.3389/fimmu.2020.00784
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- Publication type:
- Article
Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1070-5
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- Publication type:
- Article
Quantitative Analyses of the Tumor Microenvironment Composition and Orientation in the Era of Precision Medicine.
- Published in:
- Frontiers in Oncology, 2018, p. N.PAG, doi. 10.3389/fonc.2018.00390
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- Publication type:
- Article
Biological and clinical relevance of transcriptionally active human papillomavirus (HPV) infection in oropharynx squamous cell carcinoma.
- Published in:
- International Journal of Cancer, 2010, v. 126, n. 8, p. 1882, doi. 10.1002/ijc.24911
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- Publication type:
- Article
An ANOCEF genomic and transcriptomicmicroarray study of the response to radiotherapyor to alkylating first-line chemotherapy inglioblastoma patients.
- Published in:
- Molecular Cancer, 2010, v. 9, p. 234, doi. 10.1186/1476-4598-9-234
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- Publication type:
- Article