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Astrovirus MLB2, a New Gastroenteric Virus Associated with Meningitis and Disseminated Infection.
- Published in:
- 2016
- By:
- Publication type:
- journal article
OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. D1, p. D807, doi. 10.1093/nar/gky1053
- By:
- Publication type:
- Article
OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. D1, p. D744, doi. 10.1093/nar/gkw1119
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- Publication type:
- Article
CEGA--a catalog of conserved elements from genomic alignments.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 1, p. D96, doi. 10.1093/nar/gkv1163
- By:
- Publication type:
- Article
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software.
- Published in:
- Nucleic Acids Research, 2015, v. 43, n. D1, p. D250, doi. 10.1093/nar/gku1220
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- Publication type:
- Article
miRmap web: comprehensive microRNA target prediction online.
- Published in:
- Nucleic Acids Research, 2013, v. 41, p. W165, doi. 10.1093/nar/gkt430
- By:
- Publication type:
- Article
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs.
- Published in:
- Nucleic Acids Research, 2013, v. 41, p. D358, doi. 10.1093/nar/gks1116
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- Publication type:
- Article
miRmap: Comprehensive prediction of microRNA target repression strength.
- Published in:
- Nucleic Acids Research, 2012, v. 40, n. 22, p. 11673, doi. 10.1093/nar/gks901
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- Publication type:
- Article
OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011.
- Published in:
- Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D283, doi. 10.1093/nar/gkq930
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- Publication type:
- Article
miROrtho: computational survey of microRNA genes.
- Published in:
- Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D111, doi. 10.1093/nar/gkn707
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- Publication type:
- Article
OrthoDB: the hierarchical catalog of eukaryotic orthologs.
- Published in:
- Nucleic Acids Research, 2008, v. 36, p. D271
- By:
- Publication type:
- Article
Rhinovirus Genome Evolution during Experimental Human Infection.
- Published in:
- PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010588
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- Publication type:
- Article
A Teratocarcinoma-Like Human Embryonic Stem Cell (hESC) Line and Four hESC Lines Reveal Potentially.
- Published in:
- PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0010263
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- Publication type:
- Article
Expression profiles of urbilaterian genes uniquely shared between honey bee and vertebrates.
- Published in:
- BMC Genomics, 2009, v. 10, p. 1, doi. 10.1186/1471-2164-10-17
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- Publication type:
- Article
Comprehensive mouse microbiota genome catalog reveals major difference to its human counterpart.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.pcbi.1009947
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- Publication type:
- Article
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes.
- Published in:
- Molecular Biology & Evolution, 2021, v. 38, n. 10, p. 4647, doi. 10.1093/molbev/msab199
- By:
- Publication type:
- Article
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics.
- Published in:
- Molecular Biology & Evolution, 2018, v. 35, n. 3, p. 543, doi. 10.1093/molbev/msx319
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- Publication type:
- Article
The genome of the model beetle and pest Tribolium castaneum.
- Published in:
- Nature, 2008, v. 452, n. 7190, p. 949, doi. 10.1038/nature06784
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- Publication type:
- Article
Insights into social insects from the genome of the honeybee Apis mellifera.
- Published in:
- Nature, 2006, v. 443, n. 7114, p. 931, doi. 10.1038/nature05260
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- Publication type:
- Article
Enterovirus D : A Small but Versatile Species.
- Published in:
- Microorganisms, 2021, v. 9, n. 8, p. 1758, doi. 10.3390/microorganisms9081758
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- Publication type:
- Article
Protein coding potential of retroviruses and other transposable elements in vertebrate genomes.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. 3, p. 946, doi. 10.1093/nar/gki236
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- Publication type:
- Article
ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data.
- Published in:
- BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-03585-4
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- Publication type:
- Article
Functional Characterization of Transcription Factor Motifs Using Cross-species Comparison across Large Evolutionary Distances.
- Published in:
- PLoS Computational Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1371/journal.pcbi.1000652
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- Publication type:
- Article
Comparative genomics groups phages of Negativicutes and classical Firmicutes despite different Gram‐staining properties.
- Published in:
- Environmental Microbiology, 2019, v. 21, n. 11, p. 3989, doi. 10.1111/1462-2920.14746
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- Publication type:
- Article
ACI‐1 beta‐lactamase is widespread across human gut microbiomes in Negativicutes due to transposons harboured by tailed prophages.
- Published in:
- Environmental Microbiology, 2018, v. 20, n. 6, p. 2288, doi. 10.1111/1462-2920.14276
- By:
- Publication type:
- Article
A Novel Anphevirus in Aedes albopictus Mosquitoes Is Distributed Worldwide and Interacts with the Host RNA Interference Pathway.
- Published in:
- Viruses (1999-4915), 2020, v. 12, n. 11, p. 1264, doi. 10.3390/v12111264
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- Publication type:
- Article
The Genome of the Blind Soil-Dwelling and Ancestrally Wingless Dipluran Campodea augens: A Key Reference Hexapod for Studying the Emergence of Insect Innovations.
- Published in:
- Genome Biology & Evolution, 2020, v. 12, n. 1, p. 3534, doi. 10.1093/gbe/evz260
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- Publication type:
- Article
Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders.
- Published in:
- Genome Biology & Evolution, 2017, v. 9, n. 2, p. 415, doi. 10.1093/gbe/evx006
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- Publication type:
- Article
Genome Sequencing of the Phytoseiid Predatory Mite Metaseiulus occidentalis Reveals Completely Atomized Hox Genes and Superdynamic Intron Evolution.
- Published in:
- Genome Biology & Evolution, 2016, v. 8, n. 6, p. 1762, doi. 10.1093/gbe/evw048
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- Publication type:
- Article
Correlating Traits of Gene Retention, Sequence Divergence, Duplicability and Essentiality in Vertebrates, Arthropods, and Fungi.
- Published in:
- Genome Biology & Evolution, 2011, v. 3, p. 75, doi. 10.1093/gbe/evq083
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- Publication type:
- Article
Sociality Is Linked to Rates of Protein Evolution in a Highly Social Insect.
- Published in:
- Molecular Biology & Evolution, 2010, v. 27, n. 3, p. 497, doi. 10.1093/molbev/msp225
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- Publication type:
- Article
Comprehensive metagenomic analysis of glioblastoma reveals absence of known virus despite antiviral-like type I interferon gene response.
- Published in:
- International Journal of Cancer, 2014, v. 135, n. 6, p. 1381, doi. 10.1002/ijc.28670
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- Publication type:
- Article
Identification of a miRNA multi-targeting therapeutic strategy in glioblastoma.
- Published in:
- Cell Death & Disease, 2023, v. 14, n. 9, p. 1, doi. 10.1038/s41419-023-06117-z
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- Publication type:
- Article
Metagenomics analysis of red blood cell and fresh-frozen plasma units.
- Published in:
- 2017
- By:
- Publication type:
- journal article
The EBI SRS server—new features.
- Published in:
- Bioinformatics, 2002, v. 18, n. 8, p. 1149, doi. 10.1093/bioinformatics/18.8.1149
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- Publication type:
- Article
OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. D1, p. D445, doi. 10.1093/nar/gkac998
- By:
- Publication type:
- Article
mitochondria-specific mutational signature of aging: increased rate of A > G substitutions on the heavy strand.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 18, p. 10264, doi. 10.1093/nar/gkac779
- By:
- Publication type:
- Article
OrthoDB in 2020: evolutionary and functional annotations of orthologs.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. D1, p. D389, doi. 10.1093/nar/gkaa1009
- By:
- Publication type:
- Article
BUSCO: Assessing Genomic Data Quality and Beyond.
- Published in:
- Current Protocols, 2021, v. 1, n. 12, p. 1, doi. 10.1002/cpz1.323
- By:
- Publication type:
- Article
Viral Sequences Detection by High-Throughput Sequencing in Cerebrospinal Fluid of Individuals with and without Central Nervous System Disease.
- Published in:
- Genes, 2019, v. 10, n. 8, p. 625, doi. 10.3390/genes10080625
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- Publication type:
- Article
Consistency of genome-based methods in measuring Metazoan evolution
- Published in:
- FEBS Letters, 2005, v. 579, n. 15, p. 3355, doi. 10.1016/j.febslet.2005.04.006
- By:
- Publication type:
- Article
Phigaro: high-throughput prophage sequence annotation.
- Published in:
- Bioinformatics, 2020, v. 36, n. 12, p. 3882, doi. 10.1093/bioinformatics/btaa250
- By:
- Publication type:
- Article
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
- Published in:
- Bioinformatics, 2015, v. 31, n. 19, p. 3210, doi. 10.1093/bioinformatics/btv351
- By:
- Publication type:
- Article
The Newick utilities: high-throughput phylogenetic tree processing in the Unix shell.
- Published in:
- Bioinformatics, 2010, v. 26, n. 13, p. 1669, doi. 10.1093/bioinformatics/btq243
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- Publication type:
- Article