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High-throughput mutagenesis identifies mutations and RNA-binding proteins controlling CD19 splicing and CART-19 therapy resistance.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31818-y
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- Publication type:
- Article
Functional RNA Dynamics Are Progressively Governed by RNA Destabilization during the Adaptation to Chronic Hypoxia.
- Published in:
- International Journal of Molecular Sciences, 2022, v. 23, n. 10, p. 5824, doi. 10.3390/ijms23105824
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- Publication type:
- Article
Phenotypic Plasticity of Fibroblasts during Mammary Carcinoma Development.
- Published in:
- International Journal of Molecular Sciences, 2019, v. 20, n. 18, p. 4438, doi. 10.3390/ijms20184438
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- Publication type:
- Article
Makorin 1 controls embryonic patterning by alleviating Bruno1-mediated repression of oskar translation.
- Published in:
- PLoS Genetics, 2020, v. 16, n. 1, p. 1, doi. 10.1371/journal.pgen.1008581
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- Publication type:
- Article
mRNA trafficking in fungi.
- Published in:
- Molecular Genetics & Genomics, 2007, v. 278, n. 4, p. 347, doi. 10.1007/s00438-007-0271-8
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- Publication type:
- Article
Splicing repression allows the gradual emergence of new Alu-exons in primate evolution.
- Published in:
- eLife, 2016, p. 1, doi. 10.7554/eLife.19545
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- Publication type:
- Article
Intergenic Alu exonisation facilitates the evolution of tissue-specific transcript ends.
- Published in:
- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10492, doi. 10.1093/nar/gkv956
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- Publication type:
- Article
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.
- Published in:
- Nature Structural & Molecular Biology, 2010, v. 17, n. 7, p. 909, doi. 10.1038/nsmb.1838
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- Publication type:
- Article
Pheromone-regulated target genes respond differentially to MAPK phosphorylation of transcription factor Prf1.
- Published in:
- Molecular Microbiology, 2008, v. 69, n. 4, p. 1041, doi. 10.1111/j.1365-2958.2008.06345.x
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- Publication type:
- Article
Direct long-read RNA sequencing identifies a subset of questionable exitrons likely arising from reverse transcription artifacts.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02411-1
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- Publication type:
- Article
SRSF3 and SRSF7 modulate 3'UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02298-y
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- Publication type:
- Article
A combined computational pipeline to detect circular RNAs in human cancer cells under hypoxic stress.
- Published in:
- Journal of Molecular Cell Biology, 2019, v. 11, n. 10, p. 829, doi. 10.1093/jmcb/mjz094
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- Publication type:
- Article
The key protein of endosomal mRNP transport Rrm4 binds translational landmark sites of cargo mRNAs.
- Published in:
- EMBO Reports, 2019, v. 20, n. 1, p. N.PAG, doi. 10.15252/embr.201846588
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- Publication type:
- Article
Protein-RNA interactions: new genomic technologies and perspectives.
- Published in:
- 2012
- By:
- Publication type:
- Correction Notice
Protein-RNA interactions: new genomic technologies and perspectives.
- Published in:
- Nature Reviews Genetics, 2012, v. 13, n. 2, p. 77, doi. 10.1038/nrg3141
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- Publication type:
- Article
Dynamic mRNP Remodeling in Response to Internal and External Stimuli.
- Published in:
- Biomolecules (2218-273X), 2020, v. 10, n. 9, p. 1310, doi. 10.3390/biom10091310
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- Publication type:
- Article
The fungal RNA-binding protein Rrm4 mediates long-distance transport of ubi1 and rho3 mRNAs.
- Published in:
- EMBO Journal, 2009, v. 28, n. 13, p. 1855, doi. 10.1038/emboj.2009.145
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- Publication type:
- Article
The RNA-binding profile of the splicing factor SRSF6 in immortalized human pancreatic β-cells.
- Published in:
- Life Science Alliance, 2021, v. 4, n. 3, p. 1, doi. 10.26508/lsa.202000825
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- Publication type:
- Article
Hypoxia-altered cholesterol homeostasis enhances the expression of interferon-stimulated genes upon SARS-CoV-2 infections in monocytes.
- Published in:
- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1121864
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- Publication type:
- Article
Arabidopsis thaliana GLYCINE RICH RNA‐BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation.
- Published in:
- Plant Journal, 2024, v. 118, n. 1, p. 203, doi. 10.1111/tpj.16601
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- Publication type:
- Article
uORF-Tools—Workflow for the determination of translation-regulatory upstream open reading frames.
- Published in:
- PLoS ONE, 2019, v. 14, n. 9, p. 1, doi. 10.1371/journal.pone.0222459
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- Publication type:
- Article
The RNA-binding protein HuR is essential for the B cell antibody response.
- Published in:
- Nature Immunology, 2015, v. 16, n. 4, p. 415, doi. 10.1038/ni.3115
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- Publication type:
- Article
'Artificial intelligence and machine learning in RNA biology'.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad415
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- Publication type:
- Article
Concepts and methods for transcriptome-wide prediction of chemical messenger RNA modifications with machine learning.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad163
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- Publication type:
- Article
iCLIP Predicts the Dual Splicing Effects of TIA-RNA Interactions.
- Published in:
- PLoS Biology, 2010, v. 8, n. 10, p. 1, doi. 10.1371/journal.pbio.1000530
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- Publication type:
- Article
A plant-specific clade of serine/arginine-rich proteins regulates RNA splicing homeostasis and thermotolerance in tomato.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 19, p. 11466, doi. 10.1093/nar/gkae730
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- Publication type:
- Article
A high-resolution map of functional miR-181 response elements in the thymus reveals the role of coding sequence targeting and an alternative seed match.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. 14, p. 8515, doi. 10.1093/nar/gkae416
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- Publication type:
- Article
Depletion of the RNA-binding protein PURA triggers changes in posttranscriptional gene regulation and loss of P-bodies.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. 3, p. 1297, doi. 10.1093/nar/gkac1237
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- Publication type:
- Article
Poison cassette exon splicing of SRSF6 regulates nuclear speckle dispersal and the response to hypoxia.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. 2, p. 870, doi. 10.1093/nar/gkac1225
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- Publication type:
- Article
Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. 2, p. 831, doi. 10.1093/nar/gkac1206
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- Publication type:
- Article
Deep and accurate detection of m<sup>6</sup>A RNA modifications using miCLIP2 and m6Aboost machine learning.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. 16, p. e92, doi. 10.1093/nar/gkab485
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- Publication type:
- Article
Decoding a cancer-relevant splicing decision in the RON proto-oncogene using high-throughput mutagenesis.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-05748-7
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- Publication type:
- Article
Insights into the design and interpretation of iCLIP experiments.
- Published in:
- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-016-1130-x
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- Publication type:
- Article
The RNA-binding ubiquitin ligase MKRN1 functions in ribosome-associated quality control of poly(A) translation.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1814-0
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- Publication type:
- Article
Mapping protein–RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2).
- Published in:
- Nature Protocols, 2024, v. 19, n. 4, p. 1183, doi. 10.1038/s41596-023-00935-3
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- Publication type:
- Article
Heterogenous nuclear ribonucleoprotein D-like controls endothelial cell functions.
- Published in:
- Biological Chemistry, 2024, v. 405, n. 4, p. 229, doi. 10.1515/hsz-2023-0254
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- Publication type:
- Article
Bioinformatics in theory and application – highlights of the 36th German Conference on Bioinformatics.
- Published in:
- 2021
- By:
- Publication type:
- Editorial