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nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39748-z
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- Article
Comparison of clustering methods for high-dimensional single-cell flow and mass cytometry data.
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- Cytometry. Part A, 2016, v. 89, n. 12, p. 1084, doi. 10.1002/cyto.a.23030
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- Article
Circulating neutrophil subsets in advanced lung cancer patients exhibit unique immune signature and relate to prognosis.
- Published in:
- FASEB Journal, 2020, v. 34, n. 3, p. 4204, doi. 10.1096/fj.201902467R
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- Article
miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data.
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- PLoS Computational Biology, 2021, v. 17, n. 8, p. 1, doi. 10.1371/journal.pcbi.1009290
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- Article
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering.
- Published in:
- Communications Biology, 2019, v. 2, n. 1, p. N.PAG, doi. 10.1038/s42003-019-0415-5
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- Article
Statistical methods for detecting differentially methylated loci and regions.
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- Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00324
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- Article
SpatialExperiment: infrastructure for spatially-resolved transcriptomics data in R using Bioconductor.
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- Bioinformatics, 2022, v. 38, n. 11, p. 3128, doi. 10.1093/bioinformatics/btac299
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- Article
Essential guidelines for computational method benchmarking.
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- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1738-8
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- Article
Performance of computational algorithms to deconvolve heterogeneous bulk ovarian tumor tissue depends on experimental factors.
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- Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03077-7
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- Article
Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design.
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- GigaScience, 2021, v. 10, n. 9, p. 1, doi. 10.1093/gigascience/giab062
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- Article
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data.
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- BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08601-w
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- Article
VistoSeg: Processing utilities for high-resolution images for spatially resolved transcriptomics data.
- Published in:
- Biological Imaging, 2023, v. 3, p. 1, doi. 10.1017/S2633903X23000235
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- Publication type:
- Article
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics.
- Published in:
- eLife, 2024, p. 1, doi. 10.7554/eLife.84628
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- Article
A Retrospective Study of the Effectiveness of Four Different Treatments of Periodontal Disease in Equine Cheek Teeth.
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- Journal of Veterinary Dentistry, 2016, v. 33, n. 2, p. 83, doi. 10.1177/0898756416661624
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- Article