Found: 78
Select item for more details and to access through your institution.
Unblended disjoint tree merging using GTM improves species tree estimation.
- Published in:
- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6605-1
- By:
- Publication type:
- Article
Correction to: The performance of coalescent-based species tree estimation methods under models of missing data.
- Published in:
- 2020
- By:
- Publication type:
- Correction Notice
An analytical upper bound on the number of loci required for all splits of a species tree to appear in a set of gene trees.
- Published in:
- BMC Bioinformatics, 2016, v. 17, p. 241, doi. 10.1186/s12859-016-1266-4
- By:
- Publication type:
- Article
EMMA: a new method for computing multiple sequence alignments given a constraint subset alignment.
- Published in:
- Algorithms for Molecular Biology, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13015-023-00247-x
- By:
- Publication type:
- Article
Weighted ASTRID: fast and accurate species trees from weighted internode distances.
- Published in:
- Algorithms for Molecular Biology, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13015-023-00230-6
- By:
- Publication type:
- Article
Using Robinson-Foulds supertrees in divide-and-conquer phylogeny estimation.
- Published in:
- Algorithms for Molecular Biology, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s13015-021-00189-2
- By:
- Publication type:
- Article
Phylogenomic branch length estimation using quartets.
- Published in:
- Bioinformatics, 2023, v. 39, p. i185, doi. 10.1093/bioinformatics/btad221
- By:
- Publication type:
- Article
Quintet Rooting: rooting species trees under the multi-species coalescent model.
- Published in:
- Bioinformatics, 2022, v. 38, p. i109, doi. 10.1093/bioinformatics/btac224
- By:
- Publication type:
- Article
MAGUS+eHMMs: improved multiple sequence alignment accuracy for fragmentary sequences.
- Published in:
- Bioinformatics, 2022, v. 38, n. 4, p. 918, doi. 10.1093/bioinformatics/btab788
- By:
- Publication type:
- Article
Accurate large-scale phylogeny-aware alignment using BAli-Phy.
- Published in:
- Bioinformatics, 2021, v. 37, n. 24, p. 4677, doi. 10.1093/bioinformatics/btab555
- By:
- Publication type:
- Article
FASTRAL: improving scalability of phylogenomic analysis.
- Published in:
- Bioinformatics, 2021, v. 37, n. 16, p. 2317, doi. 10.1093/bioinformatics/btab093
- By:
- Publication type:
- Article
TIPP2: metagenomic taxonomic profiling using phylogenetic markers.
- Published in:
- Bioinformatics, 2021, v. 37, n. 13, p. 1839, doi. 10.1093/bioinformatics/btab023
- By:
- Publication type:
- Article
MAGUS: Multiple sequence Alignment using Graph clUStering.
- Published in:
- Bioinformatics, 2021, v. 37, n. 12, p. 1666, doi. 10.1093/bioinformatics/btaa992
- By:
- Publication type:
- Article
Tutorial on Computational Linguistic Phylogeny.
- Published in:
- Language & Linguistics Compass, 2008, v. 2, n. 5, p. 760, doi. 10.1111/j.1749-818X.2008.00082.x
- By:
- Publication type:
- Article
Weighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses.
- Published in:
- PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0129183
- By:
- Publication type:
- Article
Treelength Optimization for Phylogeny Estimation.
- Published in:
- PLoS ONE, 2012, v. 7, n. 3, p. 1, doi. 10.1371/journal.pone.0033104
- By:
- Publication type:
- Article
RAxML and FastTree: Comparing Two Methods for Large-Scale Maximum Likelihood Phylogeny Estimation.
- Published in:
- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027731
- By:
- Publication type:
- Article
A few logs suffice to build (almost) all trees (I).
- Published in:
- Random Structures & Algorithms, 1999, v. 14, n. 2, p. 153, doi. 10.1002/(SICI)1098-2418(199903)14:2<153::AID-RSA3>3.0.CO;2-R
- By:
- Publication type:
- Article
HIPPI: highly accurate protein family classification with ensembles of HMMs.
- Published in:
- BMC Genomics, 2016, v. 17, p. 89, doi. 10.1186/s12864-016-3097-0
- By:
- Publication type:
- Article
Scaling statistical multiple sequence alignment to large datasets.
- Published in:
- BMC Genomics, 2016, v. 17, p. 135, doi. 10.1186/s12864-016-3101-8
- By:
- Publication type:
- Article
Fast and accurate methods for phylogenomic analyses.
- Published in:
- BMC Bioinformatics, 2011, v. 12, n. Suppl 9, p. 1, doi. 10.1186/1471-2105-12-S9-S4
- By:
- Publication type:
- Article
Primates, Lice and Bacteria: Speciation and Genome Evolution in the Symbionts of Hominid Lice.
- Published in:
- Molecular Biology & Evolution, 2017, v. 34, n. 7, p. 1743, doi. 10.1093/molbev/msx117
- By:
- Publication type:
- Article
Viewing computer science through citation analysis: Salton and Bergmark Redux.
- Published in:
- Scientometrics, 2020, v. 125, n. 1, p. 271, doi. 10.1007/s11192-020-03624-0
- By:
- Publication type:
- Article
Concatenation Analyses in the Presence of Incomplete Lineage Sorting.
- Published in:
- PLoS Currents, 2015, p. 127, doi. 10.1371/currents.tol.8d41ac0f13d1abedf4c4a59f5d17b1f7
- By:
- Publication type:
- Article
Standard maximum likelihood analyses of alignments with gaps can be statistically inconsistent.
- Published in:
- PLoS Currents, 2012, p. 504, doi. 10.1371/currents.RRN1308
- By:
- Publication type:
- Article
A roadmap for global synthesis of the plant tree of life.
- Published in:
- American Journal of Botany, 2018, v. 105, n. 3, p. 614, doi. 10.1002/ajb2.1041
- By:
- Publication type:
- Article
Non-parametric correction of estimated gene trees using TRACTION.
- Published in:
- Algorithms for Molecular Biology, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s13015-019-0161-8
- By:
- Publication type:
- Article
Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge.
- Published in:
- Algorithms for Molecular Biology, 2019, v. 14, n. 1, p. N.PAG, doi. 10.1186/s13015-019-0151-x
- By:
- Publication type:
- Article
Constrained incremental tree building: new absolute fast converging phylogeny estimation methods with improved scalability and accuracy.
- Published in:
- Algorithms for Molecular Biology, 2019, v. 14, n. 1, p. N.PAG, doi. 10.1186/s13015-019-0136-9
- By:
- Publication type:
- Article
OCTAL: Optimal Completion of gene trees in polynomial time.
- Published in:
- Algorithms for Molecular Biology, 2018, v. 13, p. 1, doi. 10.1186/s13015-018-0124-5
- By:
- Publication type:
- Article
Gene tree parsimony for incomplete gene trees: addressing true biological loss.
- Published in:
- Algorithms for Molecular Biology, 2018, v. 13, p. 1, doi. 10.1186/s13015-017-0120-1
- By:
- Publication type:
- Article
An experimental study of Quartets MaxCut and other supertree methods.
- Published in:
- Algorithms for Molecular Biology, 2011, v. 6, n. 1, p. 7, doi. 10.1186/1748-7188-6-7
- By:
- Publication type:
- Article
A simulation study comparing supertree and combined analysis methods using SMIDGen.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 8, doi. 10.1186/1748-7188-5-8
- By:
- Publication type:
- Article
An experimental study comparing linguistic phylogenetic reconstruction methods.
- Published in:
- Diachronica, 2013, v. 30, n. 2, p. 143, doi. 10.1075/dia.30.2.01bar
- By:
- Publication type:
- Article
Disjoint Tree Mergers for Large-Scale Maximum Likelihood Tree Estimation.
- Published in:
- Algorithms, 2021, v. 14, n. 5, p. 148, doi. 10.3390/a14050148
- By:
- Publication type:
- Article
Ultra-large alignments using phylogeny-aware profiles.
- Published in:
- Genome Biology, 2015, v. 16, p. 1, doi. 10.1186/s13059-015-0688-z
- By:
- Publication type:
- Article
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference.
- Published in:
- Genome Biology & Evolution, 2016, v. 8, n. 2, p. 330, doi. 10.1093/gbe/evv261
- By:
- Publication type:
- Article
SIESTA: enhancing searches for optimal supertrees and species trees.
- Published in:
- 2018
- By:
- Publication type:
- Abstract
The performance of coalescent-based species tree estimation methods under models of missing data.
- Published in:
- 2018
- By:
- Publication type:
- Abstract
Addressing Polymorphism in Linguistic Phylogenetics.
- Published in:
- Transactions of the Philological Society, 2024, v. 122, n. 2, p. 191, doi. 10.1111/1467-968X.12289
- By:
- Publication type:
- Article
A comparison of phylogenetic reconstruction methods on an Indo-European dataset.
- Published in:
- Transactions of the Philological Society, 2005, v. 103, n. 2, p. 171, doi. 10.1111/j.1467-968X.2005.00149.x
- By:
- Publication type:
- Article
Indo-European and Computational Cladistics.
- Published in:
- Transactions of the Philological Society, 2002, v. 100, n. 1, p. 59, doi. 10.1111/1467-968X.00091
- By:
- Publication type:
- Article
DISCO: Species Tree Inference using Multicopy Gene Family Tree Decomposition.
- Published in:
- Systematic Biology, 2022, v. 71, n. 3, p. 610, doi. 10.1093/sysbio/syab070
- By:
- Publication type:
- Article
Phylogeny Estimation Given Sequence Length Heterogeneity.
- Published in:
- Systematic Biology, 2021, v. 70, n. 2, p. 268, doi. 10.1093/sysbio/syaa058
- By:
- Publication type:
- Article
Long-Branch Attraction in Species Tree Estimation: Inconsistency of Partitioned Likelihood and Topology-Based Summary Methods.
- Published in:
- Systematic Biology, 2019, v. 68, n. 2, p. 281, doi. 10.1093/sysbio/syy061
- By:
- Publication type:
- Article
Evaluating Statistical Multiple Sequence Alignment in Comparison to Other Alignment Methods on Protein Data Sets.
- Published in:
- Systematic Biology, 2019, v. 68, n. 3, p. 396, doi. 10.1093/sysbio/syy068
- By:
- Publication type:
- Article
To Include or Not to Include: The Impact of Gene Filtering on Species Tree Estimation Methods.
- Published in:
- Systematic Biology, 2018, v. 67, n. 2, p. 285, doi. 10.1093/sysbio/syx077
- By:
- Publication type:
- Article
Phylogenomics using Target-Restricted Assembly Resolves Intrageneric Relationships of Parasitic Lice (Phthiraptera: Columbicola).
- Published in:
- Systematic Biology, 2017, v. 66, n. 6, p. 896, doi. 10.1093/sysbio/syx027
- By:
- Publication type:
- Article
Phylogenomics from Whole Genome Sequence Using aTRAM.
- Published in:
- Systematic Biology, 2017, v. 66, n. 5, p. 786, doi. 10.1093/sysbio/syw105
- By:
- Publication type:
- Article
Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting.
- Published in:
- Systematic Biology, 2016, v. 65, n. 3, p. 366, doi. 10.1093/sysbio/syu063
- By:
- Publication type:
- Article