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Model design for nonparametric phylodynamic inference and applications to pathogen surveillance.
- Published in:
- Virus Evolution, 2023, v. 9, n. 1, p. 1, doi. 10.1093/ve/vead028
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- Publication type:
- Article
Genomic epidemiology of a densely sampled COVID-19 outbreak in China.
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- Virus Evolution, 2021, v. 7, n. 1, p. 1, doi. 10.1093/ve/veaa102
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- Publication type:
- Article
Complex Population Dynamics and the Coalescent Under Neutrality.
- Published in:
- Genetics, 2012, v. 190, n. 1, p. 187, doi. 10.1534/genetics.111.134627
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- Article
Phylodynamics of Infectious Disease Epidemics.
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- Genetics, 2009, v. 183, n. 4, p. 1421, doi. 10.1534/genetics.109.106021
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- Publication type:
- Article
Incorporating Disease and Population Structure into Models of SIR Disease in Contact Networks.
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- PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0069162
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- Publication type:
- Article
Additive Uncorrelated Relaxed Clock Models for the Dating of Genomic Epidemiology Phylogenies.
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- Molecular Biology & Evolution, 2021, v. 38, n. 1, p. 307, doi. 10.1093/molbev/msaa193
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- Publication type:
- Article
Phylodynamic Inference across Epidemic Scales.
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- Molecular Biology & Evolution, 2017, v. 34, n. 5, p. 1276, doi. 10.1093/molbev/msx077
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- Publication type:
- Article
Share2Quit: Web-Based Peer-Driven Referrals for Smoking Cessation.
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- Journal of Medical Internet Research, 2013, v. 15, n. 9, p. 1, doi. 10.2196/resprot.2786
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- Publication type:
- Article
Phylodynamic Inference for Structured Epidemiological Models.
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- PLoS Computational Biology, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.pcbi.1003570
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- Publication type:
- Article
Inferring the Source of Transmission with Phylogenetic Data.
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- PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003397
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- Publication type:
- Article
Viral Phylodynamics.
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- PLoS Computational Biology, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002947
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- Article
Simple Epidemiological Dynamics Explain Phylogenetic Clustering of HIV from Patients with Recent Infection.
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- PLoS Computational Biology, 2012, v. 8, n. 6, p. 1, doi. 10.1371/journal.pcbi.1002552
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- Publication type:
- Article
Effects of Heterogeneous and Clustered Contact Patterns on Infectious Disease Dynamics.
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- PLoS Computational Biology, 2011, v. 7, n. 6, p. 1, doi. 10.1371/journal.pcbi.1002042
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- Publication type:
- Article
Model hierarchies in edge-based compartmental modeling for infectious disease spread.
- Published in:
- Journal of Mathematical Biology, 2013, v. 67, n. 4, p. 869, doi. 10.1007/s00285-012-0572-3
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- Publication type:
- Article
Identification of Hidden Population Structure in Time-Scaled Phylogenies.
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- Systematic Biology, 2020, v. 69, n. 5, p. 884, doi. 10.1093/sysbio/syaa009
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- Article
Modeling the Growth and Decline of Pathogen Effective Population Size Provides Insight into Epidemic Dynamics and Drivers of Antimicrobial Resistance.
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- Systematic Biology, 2018, v. 67, n. 4, p. 719, doi. 10.1093/sysbio/syy007
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- Publication type:
- Article
Molecular Evolution of Human Norovirus GII.2 Clusters.
- Published in:
- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.655567
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- Publication type:
- Article
Molecular Epidemiology of HIV-1 Subtype B Reveals Heterogeneous Transmission Risk: Implications for Intervention and Control.
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- 2018
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- Publication type:
- journal article
HIV-1 Transmission during Early Infection in Men Who Have Sex with Men: A Phylodynamic Analysis.
- Published in:
- PLoS Medicine, 2013, v. 10, n. 12, p. 1, doi. 10.1371/journal.pmed.1001568
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- Publication type:
- Article
Bayesian phylodynamic inference with complex models.
- Published in:
- PLoS Computational Biology, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pcbi.1006546
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- Article