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Comparative transcriptomics enables the identification of functional orthologous genes involved in early leaf growth.
- Published in:
- Plant Biotechnology Journal, 2020, v. 18, n. 2, p. 553, doi. 10.1111/pbi.13223
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- Publication type:
- Article
Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors.
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- Journal of Experimental Botany, 2021, v. 72, n. 22, p. 7927, doi. 10.1093/jxb/erab373
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- Article
Functional characterization of the Arabidopsis transcription factor bZIP29 reveals its role in leaf and root development.
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- Journal of Experimental Botany, 2016, v. 67, n. 19, p. 5825, doi. 10.1093/jxb/erw347
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- Article
Understanding genetic control of root system architecture in soybean: Insights into the genetic basis of lateral root number.
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- Plant, Cell & Environment, 2019, v. 42, n. 1, p. 212, doi. 10.1111/pce.13333
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- Article
Quantitative RNA expression analysis with Affymetrix Tiling 1.0R arrays identifies new E2F target genes.
- Published in:
- Plant Journal, 2009, v. 57, n. 1, p. 184, doi. 10.1111/j.1365-313X.2008.03662.x
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- Article
TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information.
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- Nucleic Acids Research, 2018, v. 46, n. 6, p. 1, doi. 10.1093/nar/gkx1279
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- Article
PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics.
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- Nucleic Acids Research, 2018, v. 46, n. D1, p. D1190, doi. 10.1093/nar/gkx1002
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- Article
An update on LNCipedia: a database for annotated human lncRNA sequences.
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- Nucleic Acids Research, 2015, v. 43, n. D1, p. D174, doi. 10.1093/nar/gku1060
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- Article
PLAZA 3.0: an access point for plant comparative genomics.
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- Nucleic Acids Research, 2015, v. 43, n. D1, p. D974, doi. 10.1093/nar/gku986
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- Article
A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana.
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- Nucleic Acids Research, 2014, v. 42, n. 12, p. 7681, doi. 10.1093/nar/gku502
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- Article
i-ADHoRe 3.0—fast and sensitive detection of genomic homology in extremely large data sets.
- Published in:
- Nucleic Acids Research, 2012, v. 40, n. 2, p. e11, doi. 10.1093/nar/gkr955
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- Publication type:
- Article
Arabidopsis transcription factor ANAC102 predominantly expresses a nuclear protein and acts as a negative regulator of methyl viologen-induced oxidative stress responses.
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- Journal of Experimental Botany, 2024, v. 75, n. 15, p. 4655, doi. 10.1093/jxb/erae235
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- Publication type:
- Article
Evolutionary relationships and expression analysis of EUL domain proteins in rice ( Oryza sativa).
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- Rice (19398425), 2017, v. 10, n. 1, p. 1, doi. 10.1186/s12284-017-0164-3
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- Article
Correction to: Spatiotemporal expression profle of novel and known small RNAs throughout rice plant development focussing on seed tissues.
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- 2022
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- Correction Notice
Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues.
- Published in:
- BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-021-08264-z
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- Publication type:
- Article
Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues.
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- BMC Genomics, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-08264-z
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- Publication type:
- Article
Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues.
- Published in:
- BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-021-08264-z
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- Publication type:
- Article
Multi-omics network-based functional annotation of unknown Arabidopsis genes.
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- Plant Journal, 2021, v. 108, n. 4, p. 1193, doi. 10.1111/tpj.15507
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- Article
Diurnal transcript profiling of the diatom Seminavis robusta reveals adaptations to a benthic lifestyle.
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- Plant Journal, 2021, v. 107, n. 1, p. 315, doi. 10.1111/tpj.15291
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- Publication type:
- Article
Genome-wide characterization of differential transcript usage in Arabidopsis thaliana.
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- Plant Journal, 2017, v. 92, n. 6, p. 1218, doi. 10.1111/tpj.13746
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- Article
Phylogenomic analysis of gene co-expression networks reveals the evolution of functional modules.
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- Plant Journal, 2017, v. 90, n. 3, p. 447, doi. 10.1111/tpj.13502
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- Article
The mutation nrpb1-A325V in the largest subunit of RNA polymerase II suppresses compromised growth of Arabidopsis plants deficient in a function of the general transcription factor IIF.
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- Plant Journal, 2017, v. 89, n. 4, p. 730, doi. 10.1111/tpj.13417
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- Article
SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana.
- Published in:
- Plant Journal, 2014, v. 77, n. 5, p. 782, doi. 10.1111/tpj.12432
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- Article
Drought Tolerance Conferred to Sugarcane by Association with Gluconacetobacter diazotrophicus: A Transcriptomic View of Hormone Pathways.
- Published in:
- PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0114744
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- Article
Metagenomes of the Picoalga Bathycoccus from the Chile Coastal Upwelling.
- Published in:
- PLoS ONE, 2012, v. 7, n. 6, p. 1, doi. 10.1371/journal.pone.0039648
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- Article
Subfunctionalization of Paralog Transcription Factors Contributes to Regulation of Alkaloid Pathway Branch Choice in Catharanthus roseus.
- Published in:
- Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.687406
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- Publication type:
- Article
Predicting protein-protein interactions in Arabidopsis thalianathrough integration of orthology, gene ontology and co-expression.
- Published in:
- BMC Genomics, 2009, v. 10, p. 288, doi. 10.1186/1471-2164-10-288
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- Publication type:
- Article
Neofunctionalization of Mitochondrial Proteins and Incorporation into Signaling Networks in Plants.
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- Molecular Biology & Evolution, 2019, v. 36, n. 5, p. 974, doi. 10.1093/molbev/msz031
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- Article
The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
- Published in:
- 2008
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- Publication type:
- Letter
Are We There Yet? Reliably Estimating the Completeness of Plant Genome Sequences.
- Published in:
- Plant Cell, 2016, v. 28, n. 8, p. 1759, doi. 10.1105/tpc.16.00349
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- Article
Repressor Protein Complex Regulates Leaf Growth in Arabidopsis.
- Published in:
- Plant Cell, 2015, v. 27, n. 8, p. 2273, doi. 10.1105/tpc.15.00006
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- Article
Dynamic Changes in ANGUSTIFOLIA3 Complex Composition Reveal a Growth Regulatory Mechanism in the Maize Leaf.
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- Plant Cell, 2015, v. 27, n. 6, p. 1605, doi. 10.1105/tpc.15.00269
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- Publication type:
- Article
Functional and Evolutionary Perspective on Transcription Factor Binding in Arabidopsis thaliana.
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- Plant Cell, 2014, v. 26, n. 10, p. 3894, doi. 10.1105/tpc.114.130591
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- Article
Inference of Transcriptional Networks in Arabidopsis through Conserved Noncoding Sequence Analysis.
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- Plant Cell, 2014, v. 26, n. 7, p. 2729, doi. 10.1105/tpc.114.127001
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- Publication type:
- Article
Membrane-Bound NAC Transcription Factor ANAC013 Functions in Mitochondrial Retrograde Regulation of the Oxidative Stress Response in Arabidopsis.
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- Plant Cell, 2013, v. 25, n. 9, p. 3472, doi. 10.1105/tpc.113.117168
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- Article
PLAZA: A Comparative Genomics Resource to Study Gene and Genome Evolution in Plants.
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- Plant Cell, 2009, v. 21, n. 12, p. 3718, doi. 10.1105/tpc.109.071506
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- Article
An Improved Chromosome‐scale Genome Assembly and Population Genetics resource for Populus tremula.
- Published in:
- Physiologia Plantarum, 2024, v. 176, n. 5, p. 1, doi. 10.1111/ppl.14511
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- Publication type:
- Article
Northern light reviews – Application of orthodoxy and network biology to infer gene functions in non‐model plants.
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- Physiologia Plantarum, 2024, v. 176, n. 4, p. 1, doi. 10.1111/ppl.14441
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- Publication type:
- Article
Corrigendum: The ÓMICAS alliance, an international research program on multi-omics for crop breeding optimization.
- Published in:
- Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.1104501
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- Publication type:
- Article
The ÓMICAS alliance, an international research program on multi-omics for crop breeding optimization.
- Published in:
- Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.992663
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- Publication type:
- Article
MINI‐AC: inference of plant gene regulatory networks using bulk or single‐cell accessible chromatin profiles.
- Published in:
- Plant Journal, 2024, v. 117, n. 1, p. 280, doi. 10.1111/tpj.16483
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- Publication type:
- Article
Recent development in computational approaches for uncovering genomic homology.
- Published in:
- BioEssays, 2004, v. 26, n. 11, p. 1225, doi. 10.1002/bies.20127
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- Article
Predicting transcriptional responses to heat and drought stress from genomic features using a machine learning approach in rice.
- Published in:
- Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1212073
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- Publication type:
- Article
pico- PLAZA, a genome database of microbial photosynthetic eukaryotes.
- Published in:
- Environmental Microbiology, 2013, v. 15, n. 8, p. 2147, doi. 10.1111/1462-2920.12174
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- Publication type:
- Article
The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis.
- Published in:
- Nature Communications, 2017, v. 8, n. 5, p. 15235, doi. 10.1038/ncomms15235
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- Publication type:
- Article
Small-scale gene duplications played a major role in the recent evolution of wheat chromosome 3B.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-015-0754-6
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- Publication type:
- Article
Small-scale gene duplications played a major role in the recent evolution of wheat chromosome 3B.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 188, doi. 10.1186/s13059-015-0754-6
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- Publication type:
- Article
TRAPID: an efficient online tool for the functional and comparative analysis of de novo RNA-Seq transcriptomes.
- Published in:
- Genome Biology, 2013, v. 14, n. 12, p. 1, doi. 10.1186/gb-2013-14-12-r134
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- Publication type:
- Article
Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage.
- Published in:
- Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r74
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- Publication type:
- Article
Evolutionary Genomics of Sex-Related Chromosomes at the Base of the Green Lineage.
- Published in:
- Genome Biology & Evolution, 2021, v. 13, n. 10, p. 1, doi. 10.1093/gbe/evab216
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- Publication type:
- Article