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Abnormal B cell memory subsets dominate HIV-specific responses in infected individuals.
Published in:
Journal of Clinical Investigation, 2014, v. 124, n. 7, p. 3252, doi. 10.1172/JCI74351
By:
- Kardava, Lela;
- Moir, Susan;
- Shah, Naisha;
- Wei Wang;
- Wilson, Richard;
- Buckner, Clarisa M.;
- Santich, Brian H.;
- Kim, Leo J. Y.;
- Spurlin, Emily E.;
- Nelson, Amy K.;
- Wheatley, Adam K.;
- Harvey, Christopher J.;
- McDermott, Adrian B.;
- Wucherptennig, Kai W.;
- Tae-Wook Chun;
- Tsang, John S.;
- Yuxing Li;
- Fauci, Anthony S.
Publication type:
Article
Normalizing and denoising protein expression data from droplet-based single cell profiling.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29356-8
By:
- Mulè, Matthew P.;
- Martins, Andrew J.;
- Tsang, John S.
Publication type:
Article
A crowdsourcing approach for reusing and meta-analyzing gene expression data.
Published in:
Nature Biotechnology, 2016, v. 34, n. 8, p. 803, doi. 10.1038/nbt.3603
By:
- Shah, Naisha;
- Guo, Yongjian;
- Wendelsdorf, Katherine V;
- Lu, Yong;
- Sparks, Rachel;
- Tsang, John S
Publication type:
Article
Genome-wide identification of microRNAs regulating cholesterol and triglyceride homeostasis.
Published in:
Nature Medicine, 2015, v. 21, n. 11, p. 1290, doi. 10.1038/nm.3980
By:
- Wagschal, Alexandre;
- Najafi-Shoushtari, S Hani;
- Wang, Lifeng;
- Goedeke, Leigh;
- Sinha, Sumita;
- deLemos, Andrew S;
- Black, Josh C;
- Ramírez, Cristina M;
- Li, Yingxia;
- Tewhey, Ryan;
- Hatoum, Ida;
- Shah, Naisha;
- Lu, Yong;
- Kristo, Fjoralba;
- Psychogios, Nikolaos;
- Vrbanac, Vladimir;
- Lu, Yi-Chien;
- Hla, Timothy;
- de Cabo, Rafael;
- Tsang, John S
Publication type:
Article
MicroRNAs can generate thresholds in target gene expression.
Published in:
Nature Genetics, 2011, v. 43, n. 9, p. 854, doi. 10.1038/ng.905
By:
- Mukherji, Shankar;
- Ebert, Margaret S.;
- Zheng, Grace X. Y.;
- Tsang, John S.;
- Sharp, Phillip A.;
- van Oudenaarden, Alexander
Publication type:
Article
Inflammatory and interferon gene expression signatures in patients with mitochondrial disease.
Published in:
Journal of Translational Medicine, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12967-023-04180-w
By:
- Warren, Emily B.;
- Gordon-Lipkin, Eliza M.;
- Cheung, Foo;
- Chen, Jinguo;
- Mukherjee, Amrita;
- Apps, Richard;
- Tsang, John S.;
- Jetmore, Jillian;
- Schlein, Melissa L.;
- Kruk, Shannon;
- Lei, Yuanjiu;
- West, A. Phillip;
- McGuire, Peter J.
Publication type:
Article
The National Institutes of Health Center for Human Immunology, Autoimmunity, and Inflammation: history and progress.
Published in:
Annals of the New York Academy of Sciences, 2013, v. 1285, n. 1, p. 133, doi. 10.1111/nyas.12101
By:
- Dickler, Howard B.;
- McCoy, J. Philip;
- Nussenblatt, Robert;
- Perl, Shira;
- Schwartzberg, Pamela A.;
- Tsang, John S.;
- Wang, Ena;
- Young, Neil S.
Publication type:
Article
AS03-adjuvanted H5N1 vaccine promotes antibody diversity and affinity maturation, NAI titers, cross-clade H5N1 neutralization, but not H1N1 cross-subtype neutralization.
Published in:
NPJ Vaccines, 2018, v. 3, n. 1, p. N.PAG, doi. 10.1038/s41541-018-0076-2
By:
- Khurana, Surender;
- Coyle, Elizabeth M.;
- Manischewitz, Jody;
- King, Lisa R.;
- Gao, Jin;
- Germain, Ronald N.;
- Schwartzberg, Pamela L.;
- Tsang, John S.;
- Golding, Hana
Publication type:
Article
Corrigendum: Effects of Systemically Administered Hydrocortisone on the Human Immunome.
Published in:
Scientific Reports, 2016, p. 25215, doi. 10.1038/srep25215
By:
- Olnes, Matthew J.;
- Kotliarov, Yuri;
- Biancotto, Angélique;
- Cheung, Foo;
- Chen, Jinguo;
- Shi, Rongye;
- Zhou, Huizhi;
- Wang, Ena;
- Tsang, John S.;
- Nussenblatt, Robert
Publication type:
Article
Effects of Systemically Administered Hydrocortisone on the Human Immunome.
Published in:
Scientific Reports, 2016, p. 23002, doi. 10.1038/srep23002
By:
- Olnes, Matthew J.;
- Kotliarov, Yuri;
- Biancotto, Angélique;
- Cheung, Foo;
- Chen, Jinguo;
- Shi, Rongye;
- Zhou, Huizhi;
- Wang, Ena;
- Tsang, John S.;
- Nussenblatt, Robert
Publication type:
Article
Micro RNA-455 regulates brown adipogenesis via a novel HIF1an- AMPK- PGC1α signaling network.
Published in:
EMBO Reports, 2015, v. 16, n. 10, p. 1378, doi. 10.15252/embr.201540837
By:
- Zhang, Hongbin;
- Guan, Meiping;
- Townsend, Kristy L;
- Huang, Tian Lian;
- An, Ding;
- Yan, Xu;
- Xue, Ruidan;
- Schulz, Tim J;
- Winnay, Jonathon;
- Mori, Marcelo;
- Hirshman, Michael F;
- Kristiansen, Karsten;
- Tsang, John S;
- White, Andrew P;
- Cypess, Aaron M;
- Goodyear, Laurie J;
- Tseng, Yu‐Hua
Publication type:
Article
Transcriptional Response of Respiratory Epithelium to Nontuberculous Mycobacteria.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2018, v. 58, n. 2, p. 241, doi. 10.1165/rcmb.2017-0218OC
By:
- Masashi Matsuyama;
- Martins, Andrew J.;
- Shallom, Shamira;
- Kamenyeva, Olena;
- Kashyap, Anuj;
- Sampaio, Elizabeth P.;
- Kabat, Juraj;
- Olivier, Kenneth N.;
- Zelazny, Adrian M.;
- Tsang, John S.;
- Holland, Steven M.
Publication type:
Article
eNetXplorer: an R package for the quantitative exploration of elastic net families for generalized linear models.
Published in:
BMC Bioinformatics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12859-019-2778-5
By:
- Candia, Julián;
- Tsang, John S
Publication type:
Article
Prevalence and pathogenicity of autoantibodies in patients with idiopathic CD4 lymphopenia.
Published in:
2020
By:
- Perez-Diez, Ainhoa;
- Wong, Chun-Shu;
- Liu, Xiangdong;
- Mystakelis, Harry;
- Song, Jian;
- Lu, Yong;
- Sheikh, Virginia;
- Bourgeois, Jeffrey S;
- Lisco, Andrea;
- Laidlaw, Elizabeth;
- Cudrici, Cornelia;
- Zhu, Chengsong;
- Li, Quan-Zhen;
- Freeman, Alexandra F;
- Williamson, Peter R;
- Anderson, Megan;
- Roby, Gregg;
- Tsang, John S;
- Siegel, Richard;
- Sereti, Irini
Publication type:
journal article
Sex and prior exposure jointly shape innate immune responses to a live herpesvirus vaccine.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.80652
By:
- Foo Cheung;
- Apps, Richard;
- Dropulic, Lesia;
- Kotliarov, Yuri;
- Jinguo Chen;
- Jordan, Tristan;
- Langweiler, Marc;
- Candia, Julian;
- Biancotto, Angelique;
- Kyu Lee Han;
- Rachmaninoff, Nicholas;
- Pietz, Harlan;
- Kening Wang;
- Tsang, John S.;
- Cohen, Jeffrey I.
Publication type:
Article
Preliminary Findings From the Dynamics of the Immune Responses to Repeat Influenza Vaccination Exposures (DRIVE I) Study: A Randomized Controlled Trial.
Published in:
Clinical Infectious Diseases, 2024, v. 79, n. 4, p. 901, doi. 10.1093/cid/ciae380
By:
- Cowling, Benjamin J;
- Wong, Sook-San;
- Santos, Jefferson J S;
- Touyon, Lisa;
- Ort, Jordan T;
- Ye, Naiqing;
- Kwok, Natalie K M;
- Ho, Faith;
- Cheng, Samuel M S;
- Ip, Dennis K M;
- Peiris, Malik;
- Webby, Richard J;
- Wilson, Patrick C;
- Valkenburg, Sophie A;
- Tsang, John S;
- Leung, Nancy H L;
- Hensley, Scott E;
- Cobey, Sarah
Publication type:
Article
Robust Inference of Cell-to-Cell Expression Variations from Single- and K-Cell Profiling.
Published in:
PLoS Computational Biology, 2016, v. 12, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005016
By:
- Narayanan, Manikandan;
- Martins, Andrew J.;
- Tsang, John S.
Publication type:
Article
ImmuneRegulation: a web-based tool for identifying human immune regulatory elements.
Published in:
Nucleic Acids Research, 2019, v. 47, n. W1, p. W142, doi. 10.1093/nar/gkz450
By:
- Kalayci, Selim;
- Selvan, Myvizhi Esai;
- Ramos, Irene;
- Cotsapas, Chris;
- Harris, Eva;
- Kim, Eun-Young;
- Montgomery, Ruth R;
- Poland, Gregory;
- Pulendran, Bali;
- Tsang, John S;
- Klein, Robert J;
- Gümüş, Zeynep H
Publication type:
Article

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