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Ca 2+ Dependent Formation/Collapse of Cylindrical Ca 2+ -ATPase Crystals in Scallop Sarcoplasmic Reticulum (SR) Vesicles: A Possible Dynamic Role of SR in Regulation of Muscle Contraction.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 8, p. 7080, doi. 10.3390/ijms24087080
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- Article
Elongation and Contraction of Scallop Sarcoplasmic Reticulum (SR): ATP Stabilizes Ca 2+ -ATPase Crystalline Array Elongation of SR Vesicles.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 6, p. 3311, doi. 10.3390/ijms23063311
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- Article
Ca 2+ -ATPase Molecules as a Calcium-Sensitive Membrane-Endoskeleton of Sarcoplasmic Reticulum.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 5, p. 2624, doi. 10.3390/ijms22052624
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- Article
Identification of a binding element for the cytoplasmic regulator FROUNT in the membrane-proximal C-terminal region of chemokine receptors CCR2 and CCR5.
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- Biochemical Journal, 2014, v. 457, n. 2, p. 313, doi. 10.1042/BJ20130827
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- Article
TMFunction: database for functional residues in membrane proteins.
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- Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D201, doi. 10.1093/nar/gkn672
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- Article
TMBETA-GENOME: database for annotated β-barrel membrane proteins in genomic sequences.
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- Nucleic Acids Research, 2007, v. 35, p. d314, doi. 10.1093/nar/gkl805
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- Article
Discrimination of outer membrane proteins using machine learning algorithms.
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- Proteins, 2006, v. 63, n. 4, p. 1031, doi. 10.1002/prot.20929
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- Article
A novel measure characterized by a polar energy surface approximation for recognition and classification of transmembrane protein structures.
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- Proteins, 2000, v. 41, n. 4, p. 504, doi. 10.1002/1097-0134(20001201)41:4<504::AID-PROT80>3.0.CO;2-K
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- Article
Structural Basis for a Broad But Selective Ligand Spectrum of a Mouse Olfactory Receptor: Mapping the Odorant-Binding Site.
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- Journal of Neuroscience, 2005, v. 25, n. 7, p. 1806, doi. 10.1523/JNEUROSCI.4723-04.2005
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- Article
GRIFFIN: a system for predicting GPCR–G-protein coupling selectivity using a support vector machine and a hidden Markov model.
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- Nucleic Acids Research, 2005, v. 33, n. suppl 2, p. w148, doi. 10.1093/nar/gki495
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- Article
TMBETA-NET: discrimination and prediction of membrane spanning β-strands in outer membrane proteins.
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- Nucleic Acids Research, 2005, v. 33, n. suppl 2, p. w164, doi. 10.1093/nar/gki367
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- Article
Large-scale analysis of human alternative protein isoforms: pattern classification and correlation with subcellular localization signals.
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- Nucleic Acids Research, 2005, v. 33, n. 8, p. 2355, doi. 10.1093/nar/gki520
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- Article
HUNT: launch of a full-length cDNA database from the Helix Research Institute.
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- Nucleic Acids Research, 2001, v. 29, n. 1, p. 185, doi. 10.1093/nar/29.1.185
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- Article
A triangle lattice model that predicts transmembrane helix configuration using a polar jigsaw puzzle.
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- Protein Engineering, 2000, v. 13, n. 11, p. 771, doi. 10.1093/protein/13.11.771
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- Article
A Continuum theory for the prediction of lateral and rotational positioning of α-helices in membrane proteins: Bacteriorhodopsin.
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- Proteins, 1995, v. 22, n. 4, p. 363, doi. 10.1002/prot.340220407
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- Article
Interaction stabilizing tertiary structure of bacteriorhodopsin studied by denaturation experiments.
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- Proteins, 1995, v. 22, n. 4, p. 350, doi. 10.1002/prot.340220406
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- Article
Pivotal function for cytoplasmic protein FROUNT in CCR2-mediated monocyte chemotaxis.
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- Nature Immunology, 2005, v. 6, n. 8, p. 827, doi. 10.1038/ni1222
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- Article
Discrimination of Golgi Type II Membrane Proteins Based on Their Hydropathy Profiles and the Amino Acid Propensities of Their Transmembrane Regions.
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- Bioscience, Biotechnology & Biochemistry, 2011, v. 75, n. 1, p. 82, doi. 10.1271/bbb.100571
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SEVENS: a database for comprehensive GPCR genes obtained from genomes --Update to 68 eukaryotes--.
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- Biophysics & Physicobiology, 2018, v. 15, n. 1, p. 104, doi. 10.2142/biophysico.15.0_104
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Development of a Machine Learning Method to Predict Membrane Protein-Ligand Binding Residues Using Basic Sequence Information.
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- Advances in Bioinformatics, 2015, v. 2015, p. 1, doi. 10.1155/2015/843030
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Automated classification of alternative splicing and transcriptional initiation and construction of visual database of classified patterns.
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- Bioinformatics, 2006, v. 22, n. 10, p. 1211, doi. 10.1093/bioinformatics/btl067
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- Article
Discrimination of outer membrane proteins using support vector machines.
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- Bioinformatics, 2005, v. 21, n. 23, p. 4223, doi. 10.1093/bioinformatics/bti697
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- Article
GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known protein three-dimensional structures.
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- Bioinformatics, 2004, v. 20, n. 4, p. 596, doi. 10.1093/bioinformatics/btg478
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- Article
Neural network-based prediction of transmembrane β-strand segments in outer membrane proteins.
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- Journal of Computational Chemistry, 2004, v. 25, n. 5, p. 762, doi. 10.1002/jcc.10386
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Genome analysis: Assigning protein coding regions to three-dimensional structures.
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- Protein Science: A Publication of the Protein Society, 1999, v. 8, n. 4, p. 771
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FOLDING ELASTIC TRANSMEMBRANE HELICES TO FIT IN A LOW-RESOLUTION IMAGE BY ELECTRON MICROSCOPY.
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- Journal of Bioinformatics & Computational Biology, 2011, v. 9, p. 37, doi. 10.1142/S0219720011005720
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Statistical analysis and prediction of functional residues effective for GPCR–G-protein coupling selectivity.
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- PEDS: Protein Engineering, Design & Selection, 2006, v. 19, n. 6, p. 277, doi. 10.1093/protein/gzl010
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- Article