OpenURL Connection Search

Select item for more details and to access through your institution.

Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation.
Published in:
ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00290-0
By:
- Sanz-Sáez, Isabel;
- Sánchez, Pablo;
- Salazar, Guillem;
- Sunagawa, Shinichi;
- de Vargas, Colomban;
- Bowler, Chris;
- Sullivan, Matthew B.;
- Wincker, Patrick;
- Karsenti, Eric;
- Pedrós-Alió, Carlos;
- Agustí, Susana;
- Gojobori, Takashi;
- Duarte, Carlos M.;
- Gasol, Josep M.;
- Sánchez, Olga;
- Acinas, Silvia G.
Publication type:
Article
MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets.
Published in:
ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00295-9
By:
- Vik, Dean;
- Bolduc, Benjamin;
- Roux, Simon;
- Sun, Christine L.;
- Pratama, Akbar Adjie;
- Krupovic, Mart;
- Sullivan, Matthew B.
Publication type:
Article
Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study.
Published in:
Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-016-0225-7
By:
- Dae-Wook Kang;
- Adams, James B.;
- Gregory, Ann C.;
- Borody, Thomas;
- Chittick, Lauren;
- Fasano, Alessio;
- Khoruts, Alexander;
- Geis, Elizabeth;
- Maldonado, Juan;
- McDonough-Means, Sharon;
- Pollard, Elena L.;
- Roux, Simon;
- Sadowsky, Michael J.;
- Lipson, Karen Schwarzberg;
- Sullivan, Matthew B.;
- Caporaso, J. Gregory;
- Krajmalnik-Brown, Rosa
Publication type:
Article
Author Correction: High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome.
Published in:
2022
By:
- Garneau, Julian R.;
- Legrand, Véronique;
- Marbouty, Martial;
- Press, Maximilian O.;
- Vik, Dean R.;
- Fortier, Louis-Charles;
- Sullivan, Matthew B.;
- Bikard, David;
- Monot, Marc
Publication type:
Correction Notice
Author Correction: Macroscale patterns of oceanic zooplankton composition and size structure.
Published in:
2021
By:
- Brandão, Manoela C.;
- Benedetti, Fabio;
- Martini, Séverine;
- Soviadan, Yawouvi Dodji;
- Irisson, Jean-Olivier;
- Romagnan, Jean-Baptiste;
- Elineau, Amanda;
- Desnos, Corinne;
- Jalabert, Laëtitia;
- Freire, Andrea S.;
- Picheral, Marc;
- Guidi, Lionel;
- Gorsky, Gabriel;
- Bowler, Chris;
- Karp-Boss, Lee;
- Henry, Nicolas;
- de Vargas, Colomban;
- Sullivan, Matthew B.;
- Tara Oceans Consortium Coordinators;
- Acinas, Silvia G.
Publication type:
Correction Notice
Macroscale patterns of oceanic zooplankton composition and size structure.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-99772-1
By:
- Brandão, Manoela C.;
- Benedetti, Fabio;
- Martini, Séverine;
- Soviadan, Yawouvi Dodji;
- Irisson, Jean-Olivier;
- Romagnan, Jean-Baptiste;
- Elineau, Amanda;
- Desnos, Corinne;
- Jalabert, Laëtitia;
- Freire, Andrea S.;
- Picheral, Marc;
- Guidi, Lionel;
- Gorsky, Gabriel;
- Bowler, Chris;
- Karp-Boss, Lee;
- Henry, Nicolas;
- de Vargas, Colomban;
- Sullivan, Matthew B.;
- Tara Oceans Consortium Coordinators;
- Acinas, Silvia G.
Publication type:
Article
High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-97867-3
By:
- Garneau, Julian R.;
- Legrand, Véronique;
- Marbouty, Martial;
- Press, Maximilian O.;
- Vik, Dean R.;
- Fortier, Louis-Charles;
- Sullivan, Matthew B.;
- Bikard, David;
- Monot, Marc
Publication type:
Article
Comparative Omics and Trait Analyses of Marine Pseudoalteromonas Phages Advance the Phage OTU Concept.
Published in:
Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01241
By:
- Duhaime, Melissa B.;
- Solonenko, Natalie;
- Roux, Simon;
- Verberkmoes, Nathan C.;
- Wichels, Antje;
- Sullivan, Matthew B.
Publication type:
Article
Friends or Foes? Rapid Determination of Dissimilar Colistin and Ciprofloxacin Antagonism of Pseudomonas aeruginosa Phages.
Published in:
Pharmaceuticals (14248247), 2021, v. 14, n. 11, p. 1162, doi. 10.3390/ph14111162
By:
- Danis-Wlodarczyk, Katarzyna M.;
- Cai, Alice;
- Chen, Anna;
- Gittrich, Marissa R.;
- Sullivan, Matthew B.;
- Wozniak, Daniel J.;
- Abedon, Stephen T.
Publication type:
Article
Prevalence of viral photosynthesis genes along a freshwater to saltwater transect in Southeast USA.
Published in:
Environmental Microbiology Reports, 2019, v. 11, n. 5, p. 672, doi. 10.1111/1758-2229.12780
By:
- Ruiz‐Perez, Carlos A.;
- Tsementzi, Despina;
- Hatt, Janet K.;
- Sullivan, Matthew B.;
- Konstantinidis, Konstantinos T.
Publication type:
Article
Viral ecology comes of age.
Published in:
Environmental Microbiology Reports, 2017, v. 9, n. 1, p. 33, doi. 10.1111/1758-2229.12504
By:
- Sullivan, Matthew B.;
- Weitz, Joshua S.;
- Wilhelm, Steven
Publication type:
Article
A simple and efficient method for concentration of ocean viruses by chemical flocculation.
Published in:
Environmental Microbiology Reports, 2011, v. 3, n. 6, p. 809, doi. 10.1111/j.1758-2229.2011.00301.x
By:
- John, Seth G.;
- Mendez, Carolina B.;
- Deng, Li;
- Poulos, Bonnie;
- Kauffman, Anne Kathryn M.;
- Kern, Suzanne;
- Brum, Jennifer;
- Polz, Martin F.;
- Boyle, Edward A.;
- Sullivan, Matthew B.
Publication type:
Article
A simple and efficient method for concentration of ocean viruses by chemical flocculation.
Published in:
Environmental Microbiology Reports, 2011, v. 3, n. 2, p. 195, doi. 10.1111/j.1758-2229.2010.00208.x
By:
- John, Seth G.;
- Mendez, Carolina B.;
- Li Deng;
- Poulos, Bonnie;
- Kauffman, Anne Kathryn M.;
- Kern, Suzanne;
- Brum, Jennifer;
- Polz, Martin F.;
- Boyle, Edward A.;
- Sullivan, Matthew B.
Publication type:
Article
Fighting Fire with Fire: Phage Potential for the Treatment of E. coli O157 Infection.
Published in:
Antibiotics (2079-6382), 2018, v. 7, n. 4, p. 101, doi. 10.3390/antibiotics7040101
By:
- Howard-Varona, Cristina;
- Vik, Dean R.;
- Solonenko, Natalie E.;
- Li, Yueh-Fen;
- Gazitua, M. Consuelo;
- Chittick, Lauren;
- Samiec, Jennifer K.;
- Jensen, Aubrey E.;
- Anderson, Paige;
- Howard-Varona, Adrian;
- Kinkhabwala, Anika A.;
- Abedon, Stephen T.;
- Sullivan, Matthew B.
Publication type:
Article
Viral dark matter and virus-host interactions resolved from publicly available microbial genomes.
Published in:
eLife, 2015, p. 1, doi. 10.7554/eLife.08490
By:
- Roux, Simon;
- Hallam, Steven J.;
- Woyke, Tanja;
- Sullivan, Matthew B.
Publication type:
Article
IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses.
Published in:
Nucleic Acids Research, 2017, v. 45, n. D1, p. D457, doi. 10.1093/nar/gkw1030
By:
- Paez-Espino, David;
- Chen, I.-Min A.;
- Palaniappan, Krishna;
- Ratner, Anna;
- Ken Chu;
- Szeto, Ernest;
- Pillay, Manoj;
- Jinghua Huang;
- Markowitz, Victor M.;
- Nielsen, Torben;
- Huntemann, Marcel;
- Reddy, T. B. K.;
- Pavlopoulos, Georgios A.;
- Sullivan, Matthew B.;
- Campbell, Barbara J.;
- Feng Chen;
- McMahon, Katherine;
- Hallam, Steve J.;
- Denef, Vincent;
- Cavicchioli, Ricardo
Publication type:
Article
Diel cycle of sea spray aerosol concentration.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25579-3
By:
- Flores, J. Michel;
- Bourdin, Guillaume;
- Kostinski, Alexander B.;
- Altaratz, Orit;
- Dagan, Guy;
- Lombard, Fabien;
- Haëntjens, Nils;
- Boss, Emmanuel;
- Sullivan, Matthew B.;
- Gorsky, Gabriel;
- Lang-Yona, Naama;
- Trainic, Miri;
- Romac, Sarah;
- Voolstra, Christian R.;
- Rudich, Yinon;
- Vardi, Assaf;
- Koren, Ilan
Publication type:
Article
Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23698-5
By:
- Kieft, Kristopher;
- Zhou, Zhichao;
- Anderson, Rika E.;
- Buchan, Alison;
- Campbell, Barbara J.;
- Hallam, Steven J.;
- Hess, Matthias;
- Sullivan, Matthew B.;
- Walsh, David A.;
- Roux, Simon;
- Anantharaman, Karthik
Publication type:
Article
Author Correction: Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification.
Published in:
2023
By:
- Adriaenssens, Evelien M.;
- Roux, Simon;
- Brister, J. Rodney;
- Karsch-Mizrachi, Ilene;
- Kuhn, Jens H.;
- Varsani, Arvind;
- Yigang, Tong;
- Reyes, Alejandro;
- Lood, Cédric;
- Lefkowitz, Elliot J.;
- Sullivan, Matthew B.;
- Edwards, Robert A.;
- Simmonds, Peter;
- Rubino, Luisa;
- Sabanadzovic, Sead;
- Krupovic, Mart;
- Dutilh, Bas E.
Publication type:
Correction Notice
Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification.
Published in:
2023
By:
- Adriaenssens, Evelien M.;
- Roux, Simon;
- Brister, J. Rodney;
- Karsch-Mizrachi, Ilene;
- Kuhn, Jens H.;
- Varsani, Arvind;
- Yigang, Tong;
- Reyes, Alejandro;
- Lood, Cédric;
- Lefkowitz, Elliot J.;
- Sullivan, Matthew B.;
- Edwards, Robert A.;
- Simmonds, Peter;
- Rubino, Luisa;
- Sabanadzovic, Sead;
- Krupovic, Mart;
- Dutilh, Bas E.
Publication type:
Letter
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks.
Published in:
Nature Biotechnology, 2019, v. 37, n. 6, p. 632, doi. 10.1038/s41587-019-0100-8
By:
- Bin Jang, Ho;
- Bolduc, Benjamin;
- Zablocki, Olivier;
- Kuhn, Jens H.;
- Roux, Simon;
- Adriaenssens, Evelien M.;
- Brister, J. Rodney;
- Kropinski, Andrew M;
- Krupovic, Mart;
- Lavigne, Rob;
- Turner, Dann;
- Sullivan, Matthew B.
Publication type:
Article
Single-cell genomics-based analysis of virus-host interactions in marine surface bacterioplankton.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 11, p. 2386, doi. 10.1038/ismej.2015.48
By:
- Labonté, Jessica M;
- Swan, Brandon K;
- Poulos, Bonnie;
- Luo, Haiwei;
- Koren, Sergey;
- Hallam, Steven J;
- Sullivan, Matthew B;
- Woyke, Tanja;
- Eric Wommack, K;
- Stepanauskas, Ramunas
Publication type:
Article
Depth-stratified functional and taxonomic niche specialization in the 'core' and 'flexible' Pacific Ocean Virome.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 2, p. 472, doi. 10.1038/ismej.2014.143
By:
- Hurwitz, Bonnie L;
- Brum, Jennifer R;
- Sullivan, Matthew B
Publication type:
Article
Global morphological analysis of marine viruses shows minimal regional variation and dominance of non-tailed viruses.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 9, p. 1738, doi. 10.1038/ismej.2013.67
By:
- Brum, Jennifer R;
- Schenck, Ryan O;
- Sullivan, Matthew B
Publication type:
Article
Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 2, p. 256, doi. 10.1038/ismej.2012.108
By:
- Allers, Elke;
- Wright, Jody J;
- Konwar, Kishori M;
- Howes, Charles G;
- Beneze, Erica;
- Hallam, Steven J;
- Sullivan, Matthew B
Publication type:
Article
Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus.
Published in:
Nature Structural & Molecular Biology, 2010, v. 17, n. 7, p. 830, doi. 10.1038/nsmb.1823
By:
- Xiangan Liu;
- Qinfen Zhang;
- Murata, Kazuyoshi;
- Baker, Matthew L.;
- Sullivan, Matthew B.;
- Fu, Caroline;
- Dougherty, Matthew T.;
- Schmid, Michael F.;
- Osburne, Marcia S.;
- Chisholm, Sallie W.;
- Wah Chiu
Publication type:
Article
kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase.
Published in:
Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad110
By:
- Shaffer, Michael;
- Borton, Mikayla A;
- Bolduc, Ben;
- Faria, José P;
- Flynn, Rory M;
- Ghadermazi, Parsa;
- Edirisinghe, Janaka N;
- Wood-Charlson, Elisha M;
- Miller, Christopher S;
- Chan, Siu Hung Joshua;
- Sullivan, Matthew B;
- Henry, Christopher S;
- Wrighton, Kelly C
Publication type:
Article
efam: an expanded, metaproteome-supported HMM profile database of viral protein families.
Published in:
Bioinformatics, 2021, v. 37, n. 22, p. 4202, doi. 10.1093/bioinformatics/btab451
By:
- Zayed, Ahmed A;
- Lücking, Dominik;
- Mohssen, Mohamed;
- Cronin, Dylan;
- Bolduc, Ben;
- Gregory, Ann C;
- Hargreaves, Katherine R;
- Piehowski, Paul D;
- III, Richard A White;
- Huang, Eric L;
- Adkins, Joshua N;
- Roux, Simon;
- Moraru, Cristina;
- Sullivan, Matthew B
Publication type:
Article
Visualizing Adsorption of Cyanophage P-SSP7 onto Marine Prochlorococcus.
Published in:
Scientific Reports, 2017, p. 44176, doi. 10.1038/srep44176
By:
- Murata, Kazuyoshi;
- Zhang, Qinfen;
- Gerardo Galaz-Montoya, Jesús;
- Fu, Caroline;
- Coleman, Maureen L.;
- Osburne, Marcia S.;
- Schmid, Michael F.;
- Sullivan, Matthew B.;
- Chisholm, Sallie W.;
- Chiu, Wah
Publication type:
Article
Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations.
Published in:
Nature Geoscience, 2024, v. 17, n. 9, p. 912, doi. 10.1038/s41561-024-01508-z
By:
- Zhong, Zhi-Ping;
- Zablocki, Olivier;
- Li, Yueh-Fen;
- Van Etten, James L.;
- Mosley-Thompson, Ellen;
- Rich, Virginia I.;
- Thompson, Lonnie G.;
- Sullivan, Matthew B.
Publication type:
Article
Viral potential to modulate microbial methane metabolism varies by habitat.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46109-x
By:
- Zhong, Zhi-Ping;
- Du, Jingjie;
- Köstlbacher, Stephan;
- Pjevac, Petra;
- Orlić, Sandi;
- Sullivan, Matthew B.
Publication type:
Article
Interrogating the viral dark matter of the rumen ecosystem with a global virome database.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41075-2
By:
- Yan, Ming;
- Pratama, Akbar Adjie;
- Somasundaram, Sripoorna;
- Li, Zongjun;
- Jiang, Yu;
- Sullivan, Matthew B.;
- Yu, Zhongtang
Publication type:
Article
Life-Style and Genome Structure of Marine Pseudoalteromonas Siphovirus B8b Isolated from the Northwestern Mediterranean Sea.
Published in:
PLoS ONE, 2015, v. 10, n. 1, p. 1, doi. 10.1371/journal.pone.0114829
By:
- Lara, Elena;
- Holmfeldt, Karin;
- Solonenko, Natalie;
- Sà, Elisabet Laia;
- Ignacio-Espinoza, J. Cesar;
- Cornejo-Castillo, Francisco M.;
- Verberkmoes, Nathan C.;
- Vaqué, Dolors;
- Sullivan, Matthew B.;
- Acinas, Silvia G.
Publication type:
Article
The Pacific Ocean Virome (POV): A Marine Viral Metagenomic Dataset and Associated Protein Clusters for Quantitative Viral Ecology.
Published in:
PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0057355
By:
- Hurwitz, Bonnie L.;
- Sullivan, Matthew B.
Publication type:
Article
Analysis of High-Throughput Sequencing and Annotation Strategies for Phage Genomes.
Published in:
PLoS ONE, 2010, v. 5, n. 2, p. 1, doi. 10.1371/journal.pone.0009083
By:
- Henn, Matthew R.;
- Sullivan, Matthew B.;
- Stange-Thomann, Nicole;
- Osburne, Marcia S.;
- Berlin, Aaron M.;
- Kelly, Libusha;
- Yandava, Chandri;
- Kodira, Chinnappa;
- Qiandong Zeng;
- Weiand, Michael;
- Sparrow, Todd;
- Saif, Sakina;
- Giannoukos, Georgia;
- Young, Sarah K.;
- Nusbaum, Chad;
- Birren, Bruce W.;
- Chisholm, Sallie W.
Publication type:
Article
Denitrification in estuarine sediments determined by membrane inlet mass spectrometry.
Published in:
Limnology & Oceanography, 1998, v. 43, n. 2, p. 334, doi. 10.4319/lo.1998.43.2.0334
By:
- Kunu, Todd M.;
- Sullivan, Matthew B.;
- Cornwell, Jeffrey C.;
- Groxzkowski, Kevin M.
Publication type:
Article
Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer.
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3286-x
By:
- Gregory, Ann C.;
- Solonenko, Sergei A.;
- Ignacio-Espinoza, J. Cesar;
- LaButti, Kurt;
- Copeland, Alex;
- Sudek, Sebastian;
- Maitland, Ashley;
- Chittick, Lauren;
- dos Santos, Filipa;
- Weitz, Joshua S.;
- Worden, Alexandra Z.;
- Woyke, Tanja;
- Sullivan, Matthew B.
Publication type:
Article
Numerous cultivated and uncultivated viruses encode ribosomal proteins.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08672-6
By:
- Mizuno, Carolina M.;
- Guyomar, Charlotte;
- Roux, Simon;
- Lavigne, Régis;
- Rodriguez-Valera, Francisco;
- Sullivan, Matthew B.;
- Gillet, Reynald;
- Forterre, Patrick;
- Krupovic, Mart
Publication type:
Article
Smoking is associated with quantifiable differences in the human lung DNA virome and metabolome.
Published in:
2018
By:
- Gregory, Ann C.;
- Sullivan, Matthew B.;
- Segal, Leopoldo N.;
- Keller, Brian C.
Publication type:
journal article
Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution.
Published in:
2007
By:
- Lindell, Debbie;
- Jaffe, Jacob D.;
- Coleman, Maureen L.;
- Futschik, Matthias E.;
- Axmann, Ilka M.;
- Rector, Trent;
- Kettler, Gregory;
- Sullivan, Matthew B.;
- Steen, Robert;
- Hess, Wolfgang R.;
- Church, George M.;
- Chisholm, Sallie W.
Publication type:
Letter
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans.
Published in:
Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01876-z
By:
- Tian, Funing;
- Wainaina, James M.;
- Howard-Varona, Cristina;
- Domínguez-Huerta, Guillermo;
- Bolduc, Benjamin;
- Gazitúa, Maria Consuelo;
- Smith, Garrett;
- Gittrich, Marissa R.;
- Zablocki, Olivier;
- Cronin, Dylan R.;
- Eveillard, Damien;
- Hallam, Steven J.;
- Sullivan, Matthew B.
Publication type:
Article
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021.
Published in:
Archives of Virology, 2021, v. 166, n. 11, p. 3239, doi. 10.1007/s00705-021-05205-9
By:
- Krupovic, Mart;
- Turner, Dann;
- Morozova, Vera;
- Dyall-Smith, Mike;
- Oksanen, Hanna M.;
- Edwards, Rob;
- Dutilh, Bas E.;
- Lehman, Susan M.;
- Reyes, Alejandro;
- Baquero, Diana P.;
- Sullivan, Matthew B.;
- Uchiyama, Jumpei;
- Nakavuma, Jesca;
- Barylski, Jakub;
- Young, Mark J.;
- Du, Shishen;
- Alfenas-Zerbini, Poliane;
- Kushkina, Alla;
- Kropinski, Andrew M.;
- Kurtböke, Ipek
Publication type:
Article
Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.
Published in:
Archives of Virology, 2020, v. 165, n. 5, p. 1253, doi. 10.1007/s00705-020-04577-8
By:
- Adriaenssens, Evelien M.;
- Sullivan, Matthew B.;
- Knezevic, Petar;
- van Zyl, Leonardo J.;
- Sarkar, B. L.;
- Dutilh, Bas E.;
- Alfenas-Zerbini, Poliane;
- Łobocka, Małgorzata;
- Tong, Yigang;
- Brister, James Rodney;
- Moreno Switt, Andrea I.;
- Klumpp, Jochen;
- Aziz, Ramy Karam;
- Barylski, Jakub;
- Uchiyama, Jumpei;
- Edwards, Rob A.;
- Kropinski, Andrew M.;
- Petty, Nicola K.;
- Clokie, Martha R. J.;
- Kushkina, Alla I.
Publication type:
Article
Pan-Arctic plankton community structure and its global connectivity.
Published in:
Elementa: Science of the Anthropocene, 2023, v. 11, n. 1, p. 1, doi. 10.1525/elementa.2022.00060
By:
- Ibarbalz, Federico M.;
- Henry, Nicolas;
- Mahé, Frédéric;
- Ardyna, Mathieu;
- Zingone, Adriana;
- Scalco, Eleonora;
- Lovejoy, Connie;
- Lombard, Fabien;
- Jaillon, Olivier;
- Iudicone, Daniele;
- Malviya, Shruti;
- Sullivan, Matthew B.;
- Chaffron, Samuel;
- Karsenti, Eric;
- Babin, Marcel;
- Boss, Emmanuel;
- Wincker, Patrick;
- Zinger, Lucie;
- de Vargas, Colomban;
- Bowler, Chris
Publication type:
Article
Lower viral evolutionary pressure under stable versus fluctuating conditions in subzero Arctic brines.
Published in:
Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01619-6
By:
- Zhong, Zhi-Ping;
- Vik, Dean;
- Rapp, Josephine Z.;
- Zablocki, Olivier;
- Maughan, Heather;
- Temperton, Ben;
- Deming, Jody W.;
- Sullivan, Matthew B.
Publication type:
Article
MetaboDirect: an analytical pipeline for the processing of FT-ICR MS-based metabolomic data.
Published in:
Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01476-3
By:
- Ayala-Ortiz, Christian;
- Graf-Grachet, Nathalia;
- Freire-Zapata, Viviana;
- Fudyma, Jane;
- Hildebrand, Gina;
- AminiTabrizi, Roya;
- Howard-Varona, Cristina;
- Corilo, Yuri E.;
- Hess, Nancy;
- Duhaime, Melissa B.;
- Sullivan, Matthew B.;
- Tfaily, Malak M.
Publication type:
Article
MetaPop: a pipeline for macro- and microdiversity analyses and visualization of microbial and viral metagenome-derived populations.
Published in:
Microbiome, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40168-022-01231-0
By:
- Gregory, Ann C.;
- Gerhardt, Kenji;
- Zhong, Zhi-Ping;
- Bolduc, Benjamin;
- Temperton, Ben;
- Konstantinidis, Konstantinos T.;
- Sullivan, Matthew B.
Publication type:
Article
MetaPop: a pipeline for macro- and microdiversity analyses and visualization of microbial and viral metagenome-derived populations.
Published in:
Microbiome, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40168-022-01231-0
By:
- Gregory, Ann C.;
- Gerhardt, Kenji;
- Zhong, Zhi-Ping;
- Bolduc, Benjamin;
- Temperton, Ben;
- Konstantinidis, Konstantinos T.;
- Sullivan, Matthew B.
Publication type:
Article
Closely related viruses of the marine picoeukaryotic alga Ostreococcus lucimarinus exhibit different ecological strategies.
Published in:
Environmental Microbiology, 2019, v. 21, n. 6, p. 2148, doi. 10.1111/1462-2920.14608
By:
- Zimmerman, Amy E.;
- Bachy, Charles;
- Ma, Xiufeng;
- Roux, Simon;
- Jang, Ho Bin;
- Sullivan, Matthew B.;
- Waldbauer, Jacob R.;
- Worden, Alexandra Z.
Publication type:
Article
Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems.
Published in:
Environmental Microbiology, 2016, v. 18, n. 11, p. 3949, doi. 10.1111/1462-2920.13392
By:
- Holmfeldt, Karin;
- Solonenko, Natalie;
- Howard ‐ Varona, Cristina;
- Moreno, Mario;
- Malmstrom, Rex R.;
- Blow, Matthew J.;
- Sullivan, Matthew B.
Publication type:
Article

Found: 99