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ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology.
- Published in:
- Plant Cell, 2017, v. 29, n. 8, p. 1806, doi. 10.1105/tpc.17.00073
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- Publication type:
- Article
Incorporating Virtual Reactions into a Logic-based Ligand-based Virtual Screening Method to Discover New Leads.
- Published in:
- Molecular Informatics, 2015, v. 34, n. 9, p. 615, doi. 10.1002/minf.201400162
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- Publication type:
- Article
In‐Silico Device Performance Prediction of Cosensitizer Dye Pairs for Dye‐Sensitized Solar Cells.
- Published in:
- Advanced Energy Materials, 2023, v. 13, n. 6, p. 1, doi. 10.1002/aenm.202203536
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- Publication type:
- Article
Utility of plasma volume status in ambulatory patients with pulmonary hypertension.
- Published in:
- Pulmonary Circulation, 2022, v. 12, n. 1, p. 1, doi. 10.1002/pul2.12045
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- Publication type:
- Article
Focused Cardiac Ultrasound in Dyspnea of Unclear Etiology in the Emergency Department: Utility of the FLUID Score.
- Published in:
- Journal of Ultrasound in Medicine, 2020, v. 39, n. 11, p. 2211, doi. 10.1002/jum.15332
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- Publication type:
- Article
AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response.
- Published in:
- BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-26
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- Publication type:
- Article
Discovering rules for protein–ligand specificity using support vector inductive logic programming.
- Published in:
- PEDS: Protein Engineering, Design & Selection, 2009, v. 22, n. 9, p. 561, doi. 10.1093/protein/gzp035
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- Publication type:
- Article
Phylotranscriptomic Insights into the Diversification of Endothermic Thunnus Tunas.
- Published in:
- Molecular Biology & Evolution, 2019, v. 36, n. 1, p. 84, doi. 10.1093/molbev/msy198
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- Publication type:
- Article
Functional significance of mutations in the Snf2 domain of ATRX.
- Published in:
- Human Molecular Genetics, 2011, v. 20, n. 13, p. 2603, doi. 10.1093/hmg/ddr163
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- Publication type:
- Article
Wes Wehr dedication.
- Published in:
- Canadian Journal of Earth Sciences, 2005, v. 42, n. 2, p. 115, doi. 10.1139/E05-013
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- Publication type:
- Article
Structure of an XRCC1 BRCT domain: a new protein-protein interaction module.
- Published in:
- EMBO Journal, 1998, v. 17, n. 21, p. 6404, doi. 10.1093/emboj/17.21.6404
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- Publication type:
- Article
AlloPred: prediction of allosteric pockets on proteins using normal mode perturbation analysis.
- Published in:
- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0771-1
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- Publication type:
- Article
Automated identification of protein-ligand interaction features using Inductive Logic Programming: a hexose binding case study.
- Published in:
- 2012
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- Publication type:
- Case Study
Support vector inductive logic programming outperforms the naive Bayes classifier and inductive logic programming for the classification of bioactive chemical compounds.
- Published in:
- Journal of Computer-Aided Molecular Design, 2007, v. 21, n. 5, p. 269, doi. 10.1007/s10822-007-9113-3
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- Publication type:
- Article
IGSF10 mutations dysregulate gonadotropin-releasing hormone neuronal migration resulting in delayed puberty.
- Published in:
- EMBO Molecular Medicine, 2016, v. 8, n. 6, p. 626, doi. 10.15252/emmm.201606250
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- Publication type:
- Article
Genetic variation in SCN10A influences cardiac conduction.
- Published in:
- Nature Genetics, 2010, v. 42, n. 2, p. 149, doi. 10.1038/ng.516
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- Publication type:
- Article
Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels.
- Published in:
- Nature Genetics, 2009, v. 41, n. 11, p. 1170, doi. 10.1038/ng.462
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- Publication type:
- Article
Analysis and prediction of protein β-sheet structures by a combinatorial approach.
- Published in:
- Nature, 1980, v. 285, n. 5764, p. 378, doi. 10.1038/285378a0
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- Publication type:
- Article
In Silico Analysis of the Small Molecule Content of Outer Membrane Vesicles Produced by Bacteroides thetaiotaomicron Indicates an Extensive Metabolic Link between Microbe and Host.
- Published in:
- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.02440
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- Publication type:
- Article
An approach to improving multiple alignments of protein sequences using predicted secondary structure.
- Published in:
- Protein Engineering, 2001, v. 14, n. 4, p. 227, doi. 10.1093/protein/14.4.227
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- Publication type:
- Article
A novel binding site in catalase is suggested by structural similarity to the calycin superfamily.
- Published in:
- Protein Engineering, 1996, v. 9, n. 2, p. 107, doi. 10.1093/protein/9.2.107
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- Publication type:
- Article
Integrating logic-based machine learning and virtual screening to discover new drugs.
- Published in:
- 2012
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- Publication type:
- Abstract
The Phyre2 web portal for protein modeling, prediction and analysis.
- Published in:
- Nature Protocols, 2015, v. 10, n. 6, p. 845, doi. 10.1038/nprot.2015.053
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- Publication type:
- Article
Prediction of electrostatic effects of engineering of protein charges.
- Published in:
- Nature, 1987, v. 330, n. 6143, p. 86, doi. 10.1038/330086a0
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- Publication type:
- Article
AIDS vaccine predictions.
- Published in:
- Nature, 1987, v. 326, n. 6113, p. 549, doi. 10.1038/326549c0
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- Publication type:
- Article
Identification of disease-associated loci using machine learning for genotype and network data integration.
- Published in:
- Bioinformatics, 2019, v. 35, n. 24, p. 5182, doi. 10.1093/bioinformatics/btz310
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- Publication type:
- Article
PhenoRank: reducing study bias in gene prioritization through simulation.
- Published in:
- Bioinformatics, 2018, v. 34, n. 12, p. 2087, doi. 10.1093/bioinformatics/bty028
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- Publication type:
- Article
Missense3D-DB web catalogue: an atom-based analysis and repository of 4M human protein-coding genetic variants.
- Published in:
- Human Genetics, 2021, v. 140, n. 5, p. 805, doi. 10.1007/s00439-020-02246-z
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- Publication type:
- Article
Accurate determination of solvation free energies of neutral organic compounds from first principles.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28041-0
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- Publication type:
- Article
Learning in continuous action space for developing high dimensional potential energy models.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-021-27849-6
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- Publication type:
- Article
The Discovery of a Highly Selective 5,6,7,8-Tetrahydrobenzo[4,5]thieno[2,3- d]pyrimidin-4(3 H)-one SIRT2 Inhibitor that is Neuroprotective in an in vitro Parkinson's Disease Model.
- Published in:
- ChemMedChem, 2015, v. 10, n. 1, p. 69, doi. 10.1002/cmdc.201402431
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- Publication type:
- Article
Application of docking methodologies to modeled proteins.
- Published in:
- Proteins, 2020, v. 88, n. 9, p. 1180, doi. 10.1002/prot.25889
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- Publication type:
- Article
Modeling protein interactions and complexes in CAPRI: Seventh CAPRI evaluation meeting, April 3‐5 EMBL‐EBI, Hinxton, UK.
- Published in:
- Proteins, 2020, v. 88, n. 8, p. 913, doi. 10.1002/prot.25883
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- Publication type:
- Article
The 4th meeting on the Critical Assessment of Predicted Interaction (CAPRI) held at the Mare Nostrum, Barcelona.
- Published in:
- Proteins, 2010, v. 78, n. 15, p. 3065, doi. 10.1002/prot.22801
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- Publication type:
- Article
Prediction of ligand binding sites using homologous structures and conservation at CASP8.
- Published in:
- Proteins, 2009, v. 77, n. S9, p. 147, doi. 10.1002/prot.22513
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- Publication type:
- Article
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre.
- Published in:
- Proteins, 2008, v. 70, n. 3, p. 611, doi. 10.1002/prot.21688
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- Publication type:
- Article
A general approach for developing system-specific functions to score protein-ligand docked complexes using support vector inductive logic programming.
- Published in:
- Proteins, 2007, v. 69, n. 4, p. 823, doi. 10.1002/prot.21782
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- Publication type:
- Article
Prediction of the conformation and geometry of loops in globular proteins: Testing ArchDB, a structural classification of loops.
- Published in:
- Proteins, 2005, v. 60, n. 4, p. 746, doi. 10.1002/prot.20516
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- Publication type:
- Article
Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI.
- Published in:
- Proteins, 2005, v. 60, n. 2, p. 281, doi. 10.1002/prot.20571
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- Publication type:
- Article
Evaluation of the 3D-Dock protein docking suite in rounds 1 and 2 of the CAPRI blind trial.
- Published in:
- Proteins, 2003, v. 52, n. 1, p. 74, doi. 10.1002/prot.10396
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- Publication type:
- Article
CAPRI: A Critical Assessment of PRedicted Interactions.
- Published in:
- Proteins, 2003, v. 52, n. 1, p. 2, doi. 10.1002/prot.10381
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- Publication type:
- Article
Elevated Cardiac Troponin in Clinical Scenarios Beyond Obstructive Coronary Artery Disease.
- Published in:
- Medical Science Monitor, 2019, v. 25, p. 7115, doi. 10.12659/MSM.915830
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- Publication type:
- Article
3DLigandSite: structure-based prediction of protein–ligand binding sites.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. W1, p. W13, doi. 10.1093/nar/gkac250
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- Publication type:
- Article
Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. D1, p. D314, doi. 10.1093/nar/gkz967
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- Publication type:
- Article
k-SLAM: accurate and ultra-fast taxonomic classification and gene identification for large metagenomic data sets.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 4, p. 1649, doi. 10.1093/nar/gkw1248
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- Publication type:
- Article
CombFunc: predicting protein function using heterogeneous data sources.
- Published in:
- Nucleic Acids Research, 2012, v. 40, p. W466, doi. 10.1093/nar/gks489
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- Publication type:
- Article
3DLigandSite: predicting ligand-binding sites using similar structures.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. suppl_2, p. W469, doi. 10.1093/nar/gkq406
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- Publication type:
- Article
Exploring the cellular basis of human disease through a large-scale mapping of deleterious genes to cell types.
- Published in:
- Genome Medicine, 2015, v. 7, n. 1, p. 1, doi. 10.1186/s13073-015-0212-9
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- Publication type:
- Article
Exploring the cellular basis of human disease through a large-scale mapping of deleterious genes to cell types.
- Published in:
- Genome Medicine, 2015, v. 7, n. 1, p. 1, doi. 10.1186/s13073-015-0212-9
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- Publication type:
- Article
Modeling of protein interactions in genomes.
- Published in:
- Proteins, 2002, v. 47, n. 4, p. 444, doi. 10.1002/prot.10112
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- Publication type:
- Article