Found: 12

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  • RegulatorTrail: a web service for the identification of key transcriptional regulators.

    Published in:
    Nucleic Acids Research, 2017, v. 45, n. W1, p. W146, doi. 10.1093/nar/gkx350
    By:
    • Kehl, Tim;
    • Schneider, Lara;
    • Schmidt, Florian;
    • Stöckel, Daniel;
    • Gerstner, Nico;
    • Backes, Christina;
    • Meese, Eckart;
    • Keller, Andreas;
    • Schulz, Marcel H.;
    • Lenhof, Hans-Peter
    Publication type:
    Article

  • An integer linear programming approach for finding deregulated subgraphs in regulatory networks.

    Published in:
    Nucleic Acids Research, 2012, v. 40, n. 6, p. e43, doi. 10.1093/nar/gkr1227
    By:
    • Backes, Christina;
    • Rurainski, Alexander;
    • Klau, Gunnar W.;
    • Müller, Oliver;
    • Stöckel, Daniel;
    • Gerasch, Andreas;
    • Küntzer, Jan;
    • Maisel, Daniela;
    • Ludwig, Nicole;
    • Hein, Matthias;
    • Keller, Andreas;
    • Burtscher, Helmut;
    • Kaufmann, Michael;
    • Meese, Eckart;
    • Lenhof, Hans-Peter
    Publication type:
    Article

  • BALL - biochemical algorithms library 1.3.

    Published in:
    BMC Bioinformatics, 2010, v. 11, p. 531, doi. 10.1186/1471-2105-11-531
    By:
    • Hildebrandt, Andreas;
    • Dehof, Anna Katharina;
    • Rurainski, Alexander;
    • Bertsch, Andreas;
    • Schumann, Marcel;
    • Toussaint, Nora C.;
    • Moll, Andreas;
    • Stöckel, Daniel;
    • Nickels, Stefan;
    • Mueller, Sabine C.;
    • Lenhof, Hans-Peter;
    • Kohlbacher, Oliver
    Publication type:
    Article

  • Network-based interactive navigation and analysis of large biological datasets.

    Published in:
    IT: Information Technology, 2015, v. 57, n. 1, p. 37, doi. 10.1515/itit-2014-1076
    By:
    • Gerasch, Andreas;
    • Küntzer, Jan;
    • Niermann, Peter;
    • Stöckel, Daniel;
    • Kaufmann, Michael;
    • Kohlbacher, Oliver;
    • Lenhof, Hans-Peter
    Publication type:
    Article

  • The role of TCF3 as potential master regulator in blastemal Wilms tumors.

    Published in:
    International Journal of Cancer, 2019, v. 144, n. 6, p. 1432, doi. 10.1002/ijc.31834
    By:
    • Kehl, Tim;
    • Schneider, Lara;
    • Kattler, Kathrin;
    • Stöckel, Daniel;
    • Wegert, Jenny;
    • Gerstner, Nico;
    • Ludwig, Nicole;
    • Distler, Ute;
    • Tenzer, Stefan;
    • Gessler, Manfred;
    • Walter, Jörn;
    • Keller, Andreas;
    • Graf, Norbert;
    • Meese, Eckart;
    • Lenhof, Hans‐Peter
    Publication type:
    Article

  • Drug Target Inspector: An assistance tool for patient treatment stratification.

    Published in:
    International Journal of Cancer, 2016, v. 138, n. 7, p. 1765, doi. 10.1002/ijc.29897
    By:
    • Schneider, Lara;
    • Stöckel, Daniel;
    • Kehl, Tim;
    • Gerasch, Andreas;
    • Ludwig, Nicole;
    • Leidinger, Petra;
    • Huwer, Hanno;
    • Tenzer, Stefan;
    • Kohlbacher, Oliver;
    • Hildebrandt, Andreas;
    • Kaufmann, Michael;
    • Gessler, Manfred;
    • Keller, Andreas;
    • Meese, Eckart;
    • Graf, Norbert;
    • Lenhof, Hans‐Peter
    Publication type:
    Article

  • miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database.

    Published in:
    Nucleic Acids Research, 2020, v. 48, n. D1, p. D142, doi. 10.1093/nar/gkz1022
    By:
    • Kehl, Tim;
    • Kern, Fabian;
    • Backes, Christina;
    • Fehlmann, Tobias;
    • Stöckel, Daniel;
    • Meese, Eckart;
    • Lenhof, Hans-Peter;
    • Keller, Andreas
    Publication type:
    Article

  • BALL-SNP: combining genetic and structural information to identify candidate non-synonymous single nucleotide polymorphisms.

    Published in:
    Genome Medicine, 2015, v. 7, n. 1, p. 1, doi. 10.1186/s13073-015-0190-y
    By:
    • Mueller, Sabine C.;
    • Backes, Christina;
    • Kalinina, Olga V.;
    • Meder, Benjamin;
    • Stöckel, Daniel;
    • Lenhof, Hans-Peter;
    • Meese, Eckart;
    • Keller, Andreas
    Publication type:
    Article

  • REGGAE: a novel approach for the identification of key transcriptional regulators.

    Published in:
    Bioinformatics, 2018, v. 34, n. 20, p. 3503, doi. 10.1093/bioinformatics/bty372
    By:
    • Kehl, Tim;
    • Schneider, Lara;
    • Kattler, Kathrin;
    • Stöckel, Daniel;
    • Wegert, Jenny;
    • Gerstner, Nico;
    • Ludwig, Nicole;
    • Distler, Ute;
    • Schick, Markus;
    • Keller, Ulrich
    Publication type:
    Article

  • Multi-omics enrichment analysis using the GeneTrail2 web service.

    Published in:
    Bioinformatics, 2016, v. 32, n. 10, p. 1502, doi. 10.1093/bioinformatics/btv770
    By:
    • Stöckel, Daniel;
    • Kehl, Tim;
    • Trampert, Patrick;
    • Schneider, Lara;
    • Backes, Christina;
    • Ludwig, Nicole;
    • Gerasch, Andreas;
    • Kaufmann, Michael;
    • Gessler, Manfred;
    • Graf, Norbert;
    • Meese, Eckart;
    • Keller, Andreas;
    • Lenhof, Hans-Peter
    Publication type:
    Article

  • ballaxy: web services for structural bioinformatics.

    Published in:
    Bioinformatics, 2015, v. 31, n. 1, p. 121, doi. 10.1093/bioinformatics/btu574
    By:
    • Hildebrandt, Anna Katharina;
    • Stöckel, Daniel;
    • Fischer, Nina M.;
    • de la Garza, Luis;
    • Krüger, Jens;
    • Nickels, Stefan;
    • Röttig, Marc;
    • Schärfe, Charlotta;
    • Schumann, Marcel;
    • Thiel, Philipp;
    • Lenhof, Hans-Peter;
    • Kohlbacher, Oliver;
    • Hildebrandt, Andreas
    Publication type:
    Article

  • NetworkTrail—a web service for identifying and visualizing deregulated subnetworks.

    Published in:
    Bioinformatics, 2013, v. 29, n. 13, p. 1702, doi. 10.1093/bioinformatics/btt204
    By:
    • Stöckel, Daniel;
    • Müller, Oliver;
    • Kehl, Tim;
    • Gerasch, Andreas;
    • Backes, Christina;
    • Rurainski, Alexander;
    • Keller, Andreas;
    • Kaufmann, Michael;
    • Lenhof, Hans-Peter
    Publication type:
    Article