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Living to Lithified: Construction and Preservation of Silicified Biomarkers.
Published in:
Geobiology, 2024, v. 22, n. 5, p. 1, doi. 10.1111/gbi.12620
By:
- Rasmussen, Kalen L.;
- Thieringer, Patrick H.;
- Nevadomski, Sophia;
- Martinez, Aaron M.;
- Dawson, Katherine S.;
- Corsetti, Frank A.;
- Zheng, Xin‐Yuan;
- Lv, Yiwen;
- Chen, Xinyang;
- Celestian, Aaron J.;
- Berelson, William M.;
- Rollins, Nick E.;
- Spear, John R.
Publication type:
Article
Environmental Drivers of Differences in Microbial Community Structure in Crude Oil Reservoirs across a Methanogenic Gradient.
Published in:
Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.01535
By:
- Shelton, Jenna L.;
- Akob, Denise M.;
- McIntosh, Jennifer C.;
- Fierer, Noah;
- Spear, John R.;
- Warwick, Peter D.;
- McCray, John E.;
- Kirk, Matthew Fletcher;
- Redmond, Molly C.
Publication type:
Article
Carbon and Sulfur Cycling below the Chemocline in a Meromictic Lake and the Identification of a Novel Taxonomic Lineage in the FCB Superphylum, Candidatus Aegiribacteria.
Published in:
Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00598
By:
- Hamilton, Trinity L.;
- Bovee, Roderick J.;
- Sattin, Sarah R.;
- Mohr, Wiebke;
- Gilhooly Iii, William P.;
- Lyons, Timothy W.;
- Pearson, Ann;
- Macalady, Jennifer L.;
- Spear, John R.;
- Loy, Alexander
Publication type:
Article
Potential role for microbial ureolysis in the rapid formation of carbonate tufa mounds.
Published in:
Geobiology, 2022, v. 20, n. 1, p. 79, doi. 10.1111/gbi.12467
By:
- Medina Ferrer, Fernando;
- Rosen, Michael R.;
- Feyhl‐Buska, Jayme;
- Russell, Virginia V.;
- Sønderholm, Fredrik;
- Loyd, Sean;
- Shapiro, Russell;
- Stamps, Blake W.;
- Petryshyn, Victoria;
- Demirel‐Floyd, Cansu;
- Bailey, Jake V.;
- Johnson, Hope A.;
- Spear, John R.;
- Corsetti, Frank A.
Publication type:
Article
Builders, tenants, and squatters: the origins of genetic material in modern stromatolites.
Published in:
Geobiology, 2021, v. 19, n. 3, p. 261, doi. 10.1111/gbi.12429
By:
- Petryshyn, Victoria A.;
- Junkins, Emily N.;
- Stamps, Blake W.;
- Bailey, Jake V.;
- Stevenson, Bradley S.;
- Spear, John R.;
- Corsetti, Frank A.
Publication type:
Article
Microbial response to single-cell protein production and brewery wastewater treatment.
Published in:
Microbial Biotechnology, 2015, v. 8, n. 1, p. 65, doi. 10.1111/1751-7915.12128
By:
- Lee, Jackson Z.;
- Spear, John R.;
- Logan, Andrew;
- Terry, Seth
Publication type:
Article
Disturbance and temporal partitioning of the activated sludge metacommunity.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 2, p. 425, doi. 10.1038/ismej.2014.139
By:
- Vuono, David C;
- Benecke, Jan;
- Henkel, Jochen;
- Navidi, William C;
- Cath, Tzahi Y;
- Munakata-Marr, Junko;
- Spear, John R;
- Drewes, Jörg E
Publication type:
Article
Diverse capacity for 2-methylhopanoid production correlates with a specific ecological niche.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 3, p. 675, doi. 10.1038/ismej.2013.191
By:
- Ricci, Jessica N;
- Coleman, Maureen L;
- Welander, Paula V;
- Sessions, Alex L;
- Summons, Roger E;
- Spear, John R;
- Newman, Dianne K
Publication type:
Article
Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 1, p. 50, doi. 10.1038/ismej.2012.79
By:
- Kirk Harris, J;
- Gregory Caporaso, J;
- Walker, Jeffrey J;
- Spear, John R;
- Gold, Nicholas J;
- Robertson, Charles E;
- Hugenholtz, Philip;
- Goodrich, Julia;
- McDonald, Daniel;
- Knights, Dan;
- Marshall, Paul;
- Tufo, Henry;
- Knight, Rob;
- Pace, Norman R
Publication type:
Article
[FeFe]-hydrogenase in Yellowstone National Park: evidence for dispersal limitation and phylogenetic niche conservatism.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 12, p. 1485, doi. 10.1038/ismej.2010.76
By:
- Boyd, Eric S;
- Hamilton, Trinity L;
- Spear, John R;
- Lavin, Matthew;
- Peters, John W
Publication type:
Article
Intact polar lipidome and membrane adaptations of microbial communities inhabiting serpentinite-hosted fluids.
Published in:
Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1198786
By:
- Rempfert, Kaitlin R.;
- Kraus, Emily A.;
- Nothaft, Daniel B.;
- Dildar, Nadia;
- Spear, John R.;
- Sepúlveda, Julio;
- Templeton, Alexis S.
Publication type:
Article
Metapangenomic investigation provides insight into niche differentiation of methanogenic populations from the subsurface serpentinizing environment, Samail Ophiolite, Oman.
Published in:
Frontiers in Microbiology, 2023, p. 01, doi. 10.3389/fmicb.2023.1205558
By:
- Thieringer, Patrick H.;
- Boyd, Eric S.;
- Templeton, Alexis S.;
- Spear, John R.
Publication type:
Article
Spatial and temporal dynamics at an actively silicifying hydrothermal system.
Published in:
Frontiers in Microbiology, 2023, p. 01, doi. 10.3389/fmicb.2023.1172798
By:
- Rasmussen, Kalen L.;
- Stamps, Blake W.;
- Vanzin, Gary F.;
- Ulrich, Shannon M.;
- Spear, John R.
Publication type:
Article
Subsurface biogeochemical cycling of nitrogen in the actively serpentinizing Samail Ophiolite, Oman.
Published in:
Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1139633
By:
- Rempfert, Kaitlin R.;
- Nothaft, Daniel B.;
- Kraus, Emily A.;
- Asamoto, Ciara K.;
- Evans, R. Dave;
- Spear, John R.;
- Matter, Juerg M.;
- Kopf, Sebastian H.;
- Templeton, Alexis S.
Publication type:
Article
An untargeted exometabolomics approach to characterize dissolved organic matter in groundwater of the Samail Ophiolite.
Published in:
Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2023.1093372
By:
- Seyler, Lauren M.;
- Kraus, Emily A.;
- McLean, Craig;
- Spear, John R.;
- Templeton, Alexis S.;
- Schrenk, Matthew O.
Publication type:
Article
Incident bone fracture and mortality in a large HIV cohort outpatient study, 2000–2017, USA.
Published in:
Archives of Osteoporosis, 2021, v. 16, n. 1, p. 1, doi. 10.1007/s11657-021-00949-y
By:
- Battalora, Linda;
- Armon, Carl;
- Palella, Frank;
- Li, Jun;
- Overton, Edgar T.;
- Hammer, John;
- Fuhrer, Jack;
- Novak, Richard M.;
- Carlson, Kimberly;
- Spear, John R.;
- Buchacz, Kate
Publication type:
Article
Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.35
By:
- Kunin, Victor;
- Raes, Jeroen;
- Harris, J Kirk;
- Spear, John R;
- Walker, Jeffrey J;
- Ivanova, Natalia;
- von Mering, Christian;
- Bebout, Brad M;
- Pace, Norman R;
- Bork, Peer;
- Hugenholtz, Philip
Publication type:
Article
Probing the geological source and biological fate of hydrogen in Yellowstone hot springs.
Published in:
Environmental Microbiology, 2019, v. 21, n. 10, p. 3816, doi. 10.1111/1462-2920.14730
By:
- Lindsay, Melody R.;
- Colman, Daniel R.;
- Amenabar, Maximiliano J.;
- Fristad, Kirsten E.;
- Fecteau, Kristopher M.;
- Debes, Randall V.;
- Spear, John R.;
- Shock, Everett L.;
- Hoehler, Tori M.;
- Boyd, Eric S.
Publication type:
Article
Disturbance opens recruitment sites for bacterial colonization in activated sludge.
Published in:
Environmental Microbiology, 2016, v. 18, n. 1, p. 87, doi. 10.1111/1462-2920.12824
By:
- Vuono, David C.;
- Munakata ‐ Marr, Junko;
- Spear, John R.;
- Drewes, Jörg E.
Publication type:
Article
Cyanobacterial construction of hot spring siliceous stromatolites in Yellowstone National Park.
Published in:
Environmental Microbiology, 2012, v. 14, n. 5, p. 1182, doi. 10.1111/j.1462-2920.2012.02698.x
By:
- Pepe-Ranney, Charles;
- Berelson, William M.;
- Corsetti, Frank A.;
- Treants, Merika;
- Spear, John R.
Publication type:
Article
A comparative molecular analysis of water-filled limestone sinkholes in north-eastern Mexico.
Published in:
Environmental Microbiology, 2011, v. 13, n. 1, p. 226, doi. 10.1111/j.1462-2920.2010.02324.x
By:
- Sahl, Jason W.;
- Gary, Marcus O.;
- Harris, J. Kirk;
- Spear, John R.
Publication type:
Article
Microbial diversity in modern marine stromatolites, Highborne Cay, Bahamas.
Published in:
Environmental Microbiology, 2009, v. 11, n. 10, p. 2710, doi. 10.1111/j.1462-2920.2009.01998.x
By:
- Baumgartner, Laura K.;
- Spear, John R.;
- Buckley, Daniel H.;
- Pace, Norman R.;
- Reid, R. Pamela;
- Dupraz, Christophe;
- Visscher, Pieter T.
Publication type:
Article
Bacterial attachment to metal substrate and its effects on microbiologically-influenced corrosion in transporting hydrocarbon pipelines.
Published in:
Journal of Pipeline Engineering, 2012, v. 11, n. 1, p. 63
By:
- AIAbbas, Faisal M.;
- Spear, John R.;
- Kakpovbia, Anthony;
- Balhareth, Nasser M.;
- Olson, David L.;
- Mishra, Brajendra
Publication type:
Article
Geobiology of a microbial endolithic community in the Yellowstone geothermal environment.
Published in:
2005
By:
- Walker, Jeffrey J.;
- Spear, John R.;
- Pace, Norman R.
Publication type:
Letter
Accessing the Subsurface Biosphere Within Rocks Undergoing Active Low‐Temperature Serpentinization in the Samail Ophiolite (Oman Drilling Project).
Published in:
Journal of Geophysical Research. Biogeosciences, 2021, v. 126, n. 10, p. 1, doi. 10.1029/2021JG006315
By:
- Templeton, Alexis S.;
- Ellison, Eric T.;
- Glombitza, Clemens;
- Morono, Yuki;
- Rempfert, Kaitlin R.;
- Hoehler, Tori M.;
- Zeigler, Spencer D.;
- Kraus, Emily A.;
- Spear, John R.;
- Nothaft, Daniel B.;
- Fones, Elizabeth M.;
- Boyd, Eric S.;
- Munro‐Ehrlich, Mason;
- Mayhew, Lisa E.;
- Cardace, Dawn;
- Matter, Juerg M.;
- Kelemen, Peter B.
Publication type:
Article
Low-Temperature Sulfidic-Ice Microbial Communities, Borup Fiord Pass, Canadian High Arctic.
Published in:
Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01622
By:
- Trivedi, Christopher B.;
- Lau, Graham E.;
- Grasby, Stephen E.;
- Templeton, Alexis S.;
- Spear, John R.
Publication type:
Article
Environmental and Biological Influences on Carbonate Precipitation Within Hot Spring Microbial Mats in Little Hot Creek, CA.
Published in:
Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.01464
By:
- Wilmeth, Dylan T.;
- Johnson, Hope A.;
- Stamps, Blake W.;
- Berelson, William M.;
- Stevenson, Bradley S.;
- Nunn, Heather S.;
- Grim, Sharon L.;
- Dillon, Megan L.;
- Paradis, Olivia;
- Corsetti, Frank A.;
- Spear, John R.
Publication type:
Article
Near-infrared spectroscopy of lacustrine sediments in the Great Salt Lake Desert: An analog study for Martian paleolake basins.
Published in:
Journal of Geophysical Research. Planets, 2015, v. 120, n. 3, p. 599, doi. 10.1002/2014JE004707
By:
- Lynch, Kennda L.;
- Horgan, Briony H.;
- Munakata-Marr, Junko;
- Hanley, Jennifer;
- Schneider, Robin J.;
- Rey, Kevin A.;
- Spear, John R.;
- Jackson, W. Andrew;
- Ritter, Scott M.
Publication type:
Article
Factors Influencing Bacterial Diversity and Community Composition in Municipal Drinking Waters in the Ohio River Basin, USA.
Published in:
PLoS ONE, 2016, v. 11, n. 6, p. 1, doi. 10.1371/journal.pone.0157966
By:
- Stanish, Lee F.;
- Hull, Natalie M.;
- Robertson, Charles E.;
- Harris, J. Kirk;
- Stevens, Mark J.;
- Spear, John R.;
- Pace, Norman R.
Publication type:
Article
Carbonate-rich dendrolitic cones: insights into a modern analog for incipient microbialite formation, Little Hot Creek, Long Valley Caldera, California.
Published in:
NPJ Biofilms & Microbiomes, 2017, v. 3, n. 1, p. N.PAG, doi. 10.1038/s41522-017-0041-2
By:
- Bradley, James A.;
- Daille, Leslie K.;
- Trivedi, Christopher B.;
- Bojanowski, Caitlin L.;
- Stamps, Blake W.;
- Stevenson, Bradley S.;
- Nunn, Heather S.;
- Johnson, Hope A.;
- Loyd, Sean J.;
- Berelson, William M.;
- Corsetti, Frank A.;
- Spear, John R.
Publication type:
Article
Regional fresh snowfall microbiology and chemistry are driven by geography in storm-tracked events, Colorado, USA.
Published in:
PeerJ, 2018, p. 1, doi. 10.7717/peerj.5961
By:
- Honeyman, Alexander S.;
- Day, Maria L.;
- Spear, John R.
Publication type:
Article
Ancestral Absence of Electron Transport Chains in Patescibacteria and DPANN.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.01848
By:
- Beam, Jacob P.;
- Becraft, Eric D.;
- Brown, Julia M.;
- Schulz, Frederik;
- Jarett, Jessica K.;
- Bezuidt, Oliver;
- Poulton, Nicole J.;
- Clark, Kayla;
- Dunfield, Peter F.;
- Ravin, Nikolai V.;
- Spear, John R.;
- Hedlund, Brian P.;
- Kormas, Konstantinos A.;
- Sievert, Stefan M.;
- Elshahed, Mostafa S.;
- Barton, Hazel A.;
- Stott, Matthew B.;
- Eisen, Jonathan A.;
- Moser, Duane P.;
- Onstott, Tullis C.
Publication type:
Article
Abundant Atribacteria in deep marine sediment from the Adélie Basin, Antarctica.
Published in:
Frontiers in Microbiology, 2015, p. 1, doi. 10.3389/fmicb.2015.00872
By:
- Carr, Stephanie A.;
- Orcutt, Beth N.;
- Mandernack, Kevin W.;
- Spear, John R.;
- Jones, Daniel Seth;
- Malmstrom, Rex
Publication type:
Article
Differences in lateral gene transfer in hypersaline versus thermal environments.
Published in:
BMC Evolutionary Biology, 2011, v. 11, n. 1, p. 199, doi. 10.1186/1471-2148-11-199
By:
- Rhodes, Matthew E.;
- Spear, John R.;
- Oren, Aharon;
- House, Christopher H.
Publication type:
Article
Minimum-Impact Research.
Published in:
Conservation Biology, 2004, v. 18, n. 4, p. 861, doi. 10.1111/j.1523-1739.2004.L01_1.x
By:
- SPEAR, JOHN R.
Publication type:
Article
Corrigendum: Exploring, Mapping, and Data Management Integration of Habitable Environments in Astrobiology.
Published in:
2019
By:
- Chan, Marjorie A.;
- Bowen, Brenda B.;
- Corsetti, Frank A.;
- Farrand, William H.;
- Law, Emily S.;
- Newsom, Horton E.;
- Perl, Scott M.;
- Spear, John R.;
- Thompson, David R.
Publication type:
Correction Notice
Exploring, Mapping, and Data Management Integration of Habitable Environments in Astrobiology.
Published in:
Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00147
By:
- Chan, Marjorie A.;
- Bowen, Brenda B.;
- Corsetti, Frank A.;
- Farrand, William H.;
- Law, Emily S.;
- Newsom, Horton E.;
- Spear, John R.;
- Thompson, David R.
Publication type:
Article

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