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Integrating T cell receptor sequences and transcriptional profiles by clonotype neighbor graph analysis (CoNGA).
Published in:
Nature Biotechnology, 2022, v. 40, n. 1, p. 54, doi. 10.1038/s41587-021-00989-2
By:
- Schattgen, Stefan A.;
- Guion, Kate;
- Crawford, Jeremy Chase;
- Souquette, Aisha;
- Barrio, Alvaro Martinez;
- Stubbington, Michael J. T.;
- Thomas, Paul G.;
- Bradley, Philip
Publication type:
Article
Past Life and Future Effects--How Heterologous Infections Alter Immunity to Influenza Viruses.
Published in:
Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2018.01071
By:
- Souquette, Aisha;
- Thomas, Paul G.
Publication type:
Article
Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.73475
By:
- Russell, Magdalena L.;
- Souquette, Aisha;
- Levine, David M.;
- Schattgen, Stefan A.;
- Allen, E. Kaitlynn;
- Kuan, Guillermina;
- Simon, Noah;
- Balmaseda, Angel;
- Gordon, Aubree;
- Thomas, Paul G.;
- Matsen IV, Frederick A.;
- Bradley, Philip
Publication type:
Article
Preexisting memory CD4 T cells in naïve individuals confer robust immunity upon hepatitis B vaccination.
Published in:
eLife, 2022, p. 1, doi. 10.7554/eLife.68388
By:
- Elias, George;
- Meysman, Pieter;
- Bartholomeus, Esther;
- De Neuter, Nicolas;
- Keersmaekers, Nina;
- Suls, Arvid;
- Jansens, Hilde;
- Souquette, Aisha;
- De Reu, Hans;
- Emonds, Marie-Paule;
- Smits, Evelien;
- Lion, Eva;
- Thomas, Paul G.;
- Mortier, Geert;
- Van Damme, Pierre;
- Beutels, Philippe;
- Laukens, Kris;
- Van Tendeloo, Viggo;
- Ogunjimi, Benson
Publication type:
Article
TCR meta-clonotypes for biomarker discovery with tcrdist3 enabled identification of public, HLA-restricted clusters of SARS-CoV-2 TCRs.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.68605
By:
- Mayer-Blackwell, Koshlan;
- Schattgen, Stefan;
- Cohen-Lavi, Liel;
- Crawford, Jeremy C.;
- Souquette, Aisha;
- Gaevert, Jessica A.;
- Hertz, Tomer;
- Thomas, Paul G.;
- Bradley, Philip G.;
- Fiore-Gartland, Andrew
Publication type:
Article
Nasal Wash Cytokines during Respiratory Viral Infection in Pediatric Allogeneic Hematopoietic Cell-Transplant Recipients.
Published in:
American Journal of Respiratory Cell & Molecular Biology, 2020, v. 63, n. 3, p. 349, doi. 10.1165/rcmb.2020-0014OC
By:
- Flerlage, Tim;
- Souquette, Aisha;
- Allen, E. Kaitlynn;
- Brahm, Timothy;
- Crawford, Jeremy Chase;
- Tang, Li;
- Sun, Yilun;
- Maron, Gabriela;
- Wolf, Joshua;
- Triplett, Brandon;
- Thomas, Paul G.
Publication type:
Article
A constant companion: immune recognition and response to cytomegalovirus with aging and implications for immune fitness.
Published in:
GeroScience, 2017, v. 39, n. 3, p. 293, doi. 10.1007/s11357-017-9982-x
By:
- Souquette, Aisha;
- Frere, Justin;
- Smithey, Megan;
- Sauce, Delphine;
- Thomas, Paul
Publication type:
Article
Variation in the basal immune state and implications for disease.
Published in:
eLife, 2024, p. 1, doi. 10.7554/eLife.90091
By:
- Souquette, Aisha;
- Thomas, Paul G.
Publication type:
Article
Utility of nasal swabs for assessing mucosal immune responses towards SARS-CoV-2.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-44989-5
By:
- Roubidoux, Ericka Kirkpatrick;
- Brigleb, Pamela H.;
- Vegesana, Kasi;
- Souquette, Aisha;
- Whitt, Kendall;
- Freiden, Pamela;
- Allison, Kim J.;
- Cherry, Sean;
- Dallas, Ronald H.;
- Gaur, Aditya H.;
- Gowen, Ashleigh;
- Hakim, Hana;
- Hijano, Diego R.;
- Russell-Bell, Jamie;
- Tuomanen, Elaine I.;
- Webby, Richard J.;
- Allen, E. Kaitlynn;
- Awad, Walid;
- Bajracharya, Resha;
- Brice, David C.
Publication type:
Article
Utility of nasal swabs for assessing mucosal immune responses towards SARS-CoV-2.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-44989-5
By:
- Roubidoux, Ericka Kirkpatrick;
- Brigleb, Pamela H.;
- Vegesana, Kasi;
- Souquette, Aisha;
- Whitt, Kendall;
- Freiden, Pamela;
- Allison, Kim J.;
- Cherry, Sean;
- Dallas, Ronald H.;
- Gaur, Aditya H.;
- Gowen, Ashleigh;
- Hakim, Hana;
- Hijano, Diego R.;
- Russell-Bell, Jamie;
- Tuomanen, Elaine I.;
- Webby, Richard J.;
- Allen, E. Kaitlynn;
- Awad, Walid;
- Bajracharya, Resha;
- Brice, David C.
Publication type:
Article

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