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The Genome of the Plant-Associated Lactic Acid Bacterium Lactococcus lactis KF147 Harbors a Hybrid NRPS-PKS System Conserved in Strains of the Dental Cariogenic Streptococcus mutans.
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- Current Microbiology, 2020, v. 77, n. 1, p. 136, doi. 10.1007/s00284-019-01799-1
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- Article
Molecular characterization of fervidolysin, a subtilisin-like serine protease from the thermophilic bacterium Fervidobacterium pennivorans.
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- Extremophiles, 2002, v. 6, n. 3, p. 185, doi. 10.1007/s007920100239
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- Article
Single-cell genomics: unravelling the genomes of unculturable microorganisms.
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- Microbial Biotechnology, 2011, v. 4, n. 4, p. 431, doi. 10.1111/j.1751-7915.2011.00271.x
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- Article
The human gut microbiome: are we our enterotypes?
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- Microbial Biotechnology, 2011, v. 4, n. 5, p. 550, doi. 10.1111/j.1751-7915.2011.00290.x
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- Article
Searching in microbial genomes for encoded small proteins.
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- Microbial Biotechnology, 2011, v. 4, n. 3, p. 308, doi. 10.1111/j.1751-7915.2011.00261.x
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- Article
Reconstruction of the regulatory network of Lactobacillus plantarum WCFS1 on basis of correlated gene expression and conserved regulatory motifs.
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- Microbial Biotechnology, 2011, v. 4, n. 3, p. 333, doi. 10.1111/j.1751-7915.2010.00217.x
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- Publication type:
- Article
Genome-scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi-strain arrays.
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- Microbial Biotechnology, 2011, v. 4, n. 3, p. 383, doi. 10.1111/j.1751-7915.2011.00247.x
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- Article
Comparative genomics of Lactobacillus.
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- Microbial Biotechnology, 2011, v. 4, n. 3, p. 323, doi. 10.1111/j.1751-7915.2010.00215.x
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- Article
Microbial sunscreens.
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- Microbial Biotechnology, 2011, v. 4, n. 1, p. 1, doi. 10.1111/j.1751-7915.2010.00241.x
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- Article
Genomic tracing of epidemics and disease outbreaks Genomics update Genomics update.
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- 2010
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- Publication type:
- Other
Genomics of microalgae, fuel for the future?
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- Microbial Biotechnology, 2010, v. 3, n. 5, p. 514, doi. 10.1111/j.1751-7915.2010.00204.x
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- Article
Genome (re-)annotation and open-source annotation pipelines.
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- 2010
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- Publication type:
- Other
Prokaryotic whole-transcriptome analysis: deep sequencing and tiling arrays.
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- 2010
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- Publication type:
- Other
Probiotics genomics.
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- 2010
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- Publication type:
- Other
Hydrocarbon-degrading bacteria: the oil-spill clean-up crew.
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- Microbial Biotechnology, 2009, v. 2, n. 6, p. 587, doi. 10.1111/j.1751-7915.2009.00151.x
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- Article
Genomics of plant-associated microbes.
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- Microbial Biotechnology, 2009, v. 2, n. 4, p. 406, doi. 10.1111/j.1751-7915.2009.00127.x
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- Article
Bioleaching genomics.
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- Microbial Biotechnology, 2009, v. 2, n. 3, p. 297, doi. 10.1111/j.1751-7915.2009.00108.x
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- Publication type:
- Article
Genomics of deep-sea and sub-seafloor microbes.
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- Microbial Biotechnology, 2009, v. 2, n. 2, p. 157, doi. 10.1111/j.1751-7915.2009.00092.x
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- Article
Genomics of dairy fermentations.
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- Microbial Biotechnology, 2008, v. 1, n. 6, p. 435, doi. 10.1111/j.1751-7915.2008.00067.x
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- Article
Unpublished but public microbial genomes with biotechnological relevance.
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- Microbial Biotechnology, 2008, v. 1, n. 3, p. 202, doi. 10.1111/j.1751-7915.2008.00034.x
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- Article
Genomics of biological wastewater treatment.
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- Microbial Biotechnology, 2008, v. 1, n. 5, p. 333, doi. 10.1111/j.1751-7915.2008.00059.x
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- Article
Natural products genomics.
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- Microbial Biotechnology, 2008, v. 1, n. 4, p. 275, doi. 10.1111/j.1751-7915.2008.00044.x
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- Article
Wine Genomics.
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- Microbial Biotechnology, 2008, v. 1, n. 2, p. 97, doi. 10.1111/j.1751-7915.2008.00030.x
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- Article
A Novel Quality Measure and Correction Procedure for the Annotation of Microbial Translation Initiation Sites.
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- PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0133691
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- Article
Combining Chemoinformatics with Bioinformatics: <i>In Silico</i> Prediction of Bacterial Flavor-Forming Pathways by a Chemical Systems Biology Approach “Reverse Pathway Engineering”.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0084769
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- Article
<i>Lactobacillus paracasei</i> Comparative Genomics: Towards Species Pan-Genome Definition and Exploitation of Diversity.
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- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068731
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- Article
Classification of the Adenylation and Acyl-Transferase Activity of NRPS and PKS Systems Using Ensembles of Substrate Specific Hidden Markov Models.
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- PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0062136
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- Article
Genome Sequence of <i>Lactobacillus pentosus</i> KCA1: Vaginal Isolate from a Healthy Premenopausal Woman.
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- PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0059239
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- Article
SNP/RD Typing of Mycobacterium tuberculosis Beijing Strains Reveals Local and Worldwide Disseminated Clonal Complexes.
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- PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0028365
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- Article
Evolution of prokaryotic subtilases: Genome-wide analysis reveals novel subfamilies with different catalytic residues.
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- Proteins, 2007, v. 67, n. 3, p. 681, doi. 10.1002/prot.21290
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- Article
Inferring patient to patient transmission of Mycobacterium tuberculosis from whole genome sequencing data.
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- BMC Infectious Diseases, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2334-13-110
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- Article
Inferring patient to patient transmission of Mycobacterium tuberculosis from whole genome sequencing data.
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- 2013
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- Publication type:
- journal article
An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters.
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- BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-330
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- Publication type:
- Article
A generic approach to identify Transcription Factor-specific operator motifs; Inferences for LacI-family mediated regulation in Lactobacillus plantarum WCFS1.
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- BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-145
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- Publication type:
- Article
LocateP: Genome-scale subcellular-location predictor for bacterial proteins.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-173
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- Publication type:
- Article
Accelerating the reconstruction of genome-scale metabolic networks.
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- BMC Bioinformatics, 2006, v. 7, p. 296, doi. 10.1186/1471-2105-7-296
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- Publication type:
- Article
Structural analysis and proteolytic activation of Enterococcus faecalis cytolysin, a novel lantibiotic.
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- Molecular Microbiology, 1996, v. 21, n. 6, p. 1175, doi. 10.1046/j.1365-2958.1996.831449.x
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- Publication type:
- Article
Maturation pathway of nisin and other lantibiotics: post-translationally modified antimicrobial peptides exported by Gram-positive bacteria.
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- Molecular Microbiology, 1995, v. 17, n. 3, p. 427, doi. 10.1111/j.1365-2958.1995.mmi_17030427.x
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- Article
Predicting cis-acting elements of Lactobacillus plantarum by comparative genomics with different taxonomic subgroups.
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- Nucleic Acids Research, 2006, v. 34, n. 9, p. 2844, doi. 10.1093/nar/gkl370
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- Publication type:
- Article
Predicting cis-acting elements of Lactobacillus plantarum by comparative genomics with different taxonomic subgroups.
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- Nucleic Acids Research, 2006, v. 34, n. 7, p. 1947, doi. 10.1093/nar/gkl138
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- Publication type:
- Article
Correlation between sequence conservation and the genomic context after gene duplication.
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- Nucleic Acids Research, 2005, v. 33, n. 22, p. 7176, doi. 10.1093/nar/gki1005
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- Article
Correlation between sequence conservation and the genomic context after gene duplication.
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- Nucleic Acids Research, 2005, v. 33, n. 19, p. 6164, doi. 10.1093/nar/gki913
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- Publication type:
- Article
EXProt: a database for proteins with an experimentally verified function.
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- Nucleic Acids Research, 2002, v. 30, n. 1, p. 50, doi. 10.1093/nar/30.1.50
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- Publication type:
- Article
Co-Regulation of Metabolic Genes Is Better Explained by Flux Coupling Than by Network Distance.
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- PLoS Computational Biology, 2008, v. 4, n. 1, p. e26, doi. 10.1371/journal.pcbi.0040026
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- Publication type:
- Article
A novel hybrid kinase is essential for regulating the σ<sup>B</sup>-mediated stress response of Bacillus cereus.
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- Environmental Microbiology, 2010, v. 12, n. 3, p. 730, doi. 10.1111/j.1462-2920.2009.02116.x
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- Publication type:
- Article
Phenotypic and genomic diversity of Lactobacillus plantarum strains isolated from various environmental niches.
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- Environmental Microbiology, 2010, v. 12, n. 3, p. 758, doi. 10.1111/j.1462-2920.2009.02119.x
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- Publication type:
- Article
The identification of response regulator-specific binding sites reveals new roles of two-component systems in Bacillus cereus and closely related low-GC Gram-positives.
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- Environmental Microbiology, 2008, v. 10, n. 10, p. 2796, doi. 10.1111/j.1462-2920.2008.01700.x
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- Publication type:
- Article
Lactobacillus plantarum Strains Can Enhance Human Mucosal and Systemic Immunity and Prevent Non-steroidal Anti-inflammatory Drug Induced Reduction in T Regulatory Cells.
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- Frontiers in Immunology, 2017, p. 1, doi. 10.3389/fimmu.2017.01000
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- Article
Linking Bacillus cereus Genotypes and Carbohydrate Utilization Capacity.
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- PLoS ONE, 2016, v. 11, n. 6, p. 1, doi. 10.1371/journal.pone.0156796
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- Article
Visualization for genomics: the Microbial Genome Viewer.
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- Bioinformatics, 2004, v. 20, n. 11, p. 1812, doi. 10.1093/bioinformatics/bth159
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- Publication type:
- Article